RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 STAG3Q9UJ98 1225 aa25.86■■□□□ 1.73
CDH5-204ENST00000563425 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
CDH5-204ENST00000563425 STK26Q9P289 416 aa25.85■■□□□ 1.73
CDH5-204ENST00000563425 ZNF521Q96K83 1311 aa25.85■■□□□ 1.73
CDH5-204ENST00000563425 RBM19Q9Y4C8 960 aaKnown RBP25.84■■□□□ 1.73
CDH5-204ENST00000563425 MORC1Q86VD1 984 aa25.83■■□□□ 1.73
CDH5-204ENST00000563425 NINLQ9Y2I6 1382 aa25.83■■□□□ 1.72
CDH5-204ENST00000563425 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.72
CDH5-204ENST00000563425 MLECQ14165 292 aa25.82■■□□□ 1.72
CDH5-204ENST00000563425 CABP2Q9NPB3 220 aa25.82■■□□□ 1.72
CDH5-204ENST00000563425 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
CDH5-204ENST00000563425 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
CDH5-204ENST00000563425 NSD2O96028 1365 aa25.8■■□□□ 1.72
CDH5-204ENST00000563425 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
CDH5-204ENST00000563425 CCDC136Q96JN2 1154 aa25.79■■□□□ 1.72
CDH5-204ENST00000563425 PRAM1Q96QH2 718 aa25.78■■□□□ 1.72
CDH5-204ENST00000563425 DLC1Q96QB1 1528 aa25.77■■□□□ 1.72
CDH5-204ENST00000563425 CCDC146Q8IYE0 955 aa25.77■■□□□ 1.72
CDH5-204ENST00000563425 ANKRD26Q9UPS8 1709 aa25.76■■□□□ 1.71
CDH5-204ENST00000563425 POGKQ9P215 609 aa25.76■■□□□ 1.71
CDH5-204ENST00000563425 ATAD2Q6PL18 1390 aa25.76■■□□□ 1.71
CDH5-204ENST00000563425 ZMYM3Q14202 1370 aa25.75■■□□□ 1.71
CDH5-204ENST00000563425 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
CDH5-204ENST00000563425 SRPK2P78362 688 aaKnown RBP25.75■■□□□ 1.71
CDH5-204ENST00000563425 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
CDH5-204ENST00000563425 NRXN3Q9Y4C0 1643 aa25.75■■□□□ 1.71
CDH5-204ENST00000563425 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
CDH5-204ENST00000563425 MINK1Q8N4C8 1332 aaPredicted RBP25.74■■□□□ 1.71
CDH5-204ENST00000563425 A0A1W2PP64 1363 aa25.73■■□□□ 1.71
CDH5-204ENST00000563425 APAF1O14727 1248 aa25.73■■□□□ 1.71
CDH5-204ENST00000563425 ABCC11Q96J66 1382 aa25.73■■□□□ 1.71
CDH5-204ENST00000563425 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
CDH5-204ENST00000563425 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
CDH5-204ENST00000563425 EXOC6Q8TAG9 804 aa25.71■■□□□ 1.71
CDH5-204ENST00000563425 SLFN5Q08AF3 891 aa25.71■■□□□ 1.71
CDH5-204ENST00000563425 CD163L1Q9NR16 1453 aa25.7■■□□□ 1.7
CDH5-204ENST00000563425 TRMT2AQ8IZ69 625 aaKnown RBP25.69■■□□□ 1.7
CDH5-204ENST00000563425 MTHFSP49914 203 aa25.67■■□□□ 1.7
CDH5-204ENST00000563425 KIF20BQ96Q89 1820 aa25.67■■□□□ 1.7
CDH5-204ENST00000563425 UBR1Q8IWV7 1749 aa25.67■■□□□ 1.7
CDH5-204ENST00000563425 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
CDH5-204ENST00000563425 TERF2IPQ9NYB0 399 aa25.67■■□□□ 1.7
CDH5-204ENST00000563425 MED14O60244 1454 aa25.66■■□□□ 1.7
CDH5-204ENST00000563425 KNDC1Q76NI1 1749 aa25.65■■□□□ 1.7
CDH5-204ENST00000563425 CFAP53Q96M91 514 aa25.65■■□□□ 1.7
CDH5-204ENST00000563425 CDK19Q9BWU1 502 aa25.65■■□□□ 1.7
CDH5-204ENST00000563425 TNRQ92752 1358 aa25.64■■□□□ 1.7
CDH5-204ENST00000563425 PLIN1O60240 522 aa25.64■■□□□ 1.69
CDH5-204ENST00000563425 IQSEC2Q5JU85 1478 aa25.63■■□□□ 1.69
CDH5-204ENST00000563425 NLRP1Q9C000 1473 aa25.62■■□□□ 1.69
CDH5-204ENST00000563425 NKTRP30414 1462 aaKnown RBP25.62■■□□□ 1.69
CDH5-204ENST00000563425 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
CDH5-204ENST00000563425 E9PSI1 815 aa25.61■■□□□ 1.69
CDH5-204ENST00000563425 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
CDH5-204ENST00000563425 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
CDH5-204ENST00000563425 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
CDH5-204ENST00000563425 HDGFL2Q7Z4V5 671 aaPredicted RBP25.58■■□□□ 1.69
CDH5-204ENST00000563425 METP08581 1390 aa25.57■■□□□ 1.68
CDH5-204ENST00000563425 ATP7BP35670 1465 aa25.57■■□□□ 1.68
CDH5-204ENST00000563425 FYB1O15117 783 aa25.57■■□□□ 1.68
CDH5-204ENST00000563425 WWC1Q8IX03 1113 aa25.57■■□□□ 1.68
CDH5-204ENST00000563425 CRBNQ96SW2 442 aa25.57■■□□□ 1.68
CDH5-204ENST00000563425 GGNBP2Q9H3C7 697 aa25.56■■□□□ 1.68
CDH5-204ENST00000563425 CABP1Q9NZU7 370 aa25.55■■□□□ 1.68
CDH5-204ENST00000563425 DMRT2Q9Y5R5 561 aa25.55■■□□□ 1.68
CDH5-204ENST00000563425 TECPR2O15040 1411 aa25.55■■□□□ 1.68
CDH5-204ENST00000563425 COL3A1P02461 1466 aaPredicted RBP25.55■■□□□ 1.68
CDH5-204ENST00000563425 CPS1P31327 1500 aa25.54■■□□□ 1.68
CDH5-204ENST00000563425 ADGRB2O60241 1585 aa25.54■■□□□ 1.68
CDH5-204ENST00000563425 TMEM2Q9UHN6 1383 aa25.54■■□□□ 1.68
CDH5-204ENST00000563425 FANCIQ9NVI1 1328 aa25.54■■□□□ 1.68
CDH5-204ENST00000563425 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
CDH5-204ENST00000563425 FAM135BQ49AJ0 1406 aa25.53■■□□□ 1.68
CDH5-204ENST00000563425 TCP11L2Q8N4U5 519 aa25.53■■□□□ 1.68
CDH5-204ENST00000563425 C20orf194Q5TEA3 1177 aa25.52■■□□□ 1.68
CDH5-204ENST00000563425 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.52■■□□□ 1.68
CDH5-204ENST00000563425 SIRT1Q96EB6 747 aa25.51■■□□□ 1.67
CDH5-204ENST00000563425 NCBP3Q53F19 620 aaKnown RBP25.51■■□□□ 1.67
CDH5-204ENST00000563425 C3P01024 1663 aa25.5■■□□□ 1.67
CDH5-204ENST00000563425 CCDC27Q2M243 656 aa25.49■■□□□ 1.67
CDH5-204ENST00000563425 WASLO00401 505 aaPredicted RBP25.48■■□□□ 1.67
CDH5-204ENST00000563425 U2AF1L5P0DN76 240 aaPredicted RBP25.47■■□□□ 1.67
CDH5-204ENST00000563425 U2AF1Q01081 240 aaKnown RBP eCLIP25.47■■□□□ 1.67
CDH5-204ENST00000563425 TXNDC2Q86VQ3 553 aa25.47■■□□□ 1.67
CDH5-204ENST00000563425 WDR63Q8IWG1 891 aa25.47■■□□□ 1.67
CDH5-204ENST00000563425 RRP7AQ9Y3A4 280 aaKnown RBP25.47■■□□□ 1.67
CDH5-204ENST00000563425 MAP2P11137 1827 aaKnown RBP25.46■■□□□ 1.67
CDH5-204ENST00000563425 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
CDH5-204ENST00000563425 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
CDH5-204ENST00000563425 NEUROD2Q15784 382 aa25.45■■□□□ 1.67
CDH5-204ENST00000563425 AKAP12Q02952 1782 aa25.45■■□□□ 1.67
CDH5-204ENST00000563425 CPSF1Q10570 1443 aaKnown RBP25.45■■□□□ 1.67
CDH5-204ENST00000563425 ADAMTS13Q76LX8 1427 aa25.45■■□□□ 1.67
CDH5-204ENST00000563425 ITSN1Q15811 1721 aa25.44■■□□□ 1.66
CDH5-204ENST00000563425 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
CDH5-204ENST00000563425 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
CDH5-204ENST00000563425 PPIP5K1Q6PFW1 1433 aa25.44■■□□□ 1.66
CDH5-204ENST00000563425 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
CDH5-204ENST00000563425 EDC4Q6P2E9 1401 aaKnown RBP25.42■■□□□ 1.66
CDH5-204ENST00000563425 BCAR3O75815 825 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms