RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 LRPPRCP42704 1394 aaKnown RBP31.2■■■□□ 2.59
CHD9-208ENST00000563410 RXRBP28702 533 aa31.19■■■□□ 2.58
CHD9-208ENST00000563410 STK26Q9P289 416 aa31.18■■■□□ 2.58
CHD9-208ENST00000563410 ABCC11Q96J66 1382 aa31.17■■■□□ 2.58
CHD9-208ENST00000563410 TMEM132EQ6IEE7 984 aa31.17■■■□□ 2.58
CHD9-208ENST00000563410 WAPLQ7Z5K2 1190 aa31.17■■■□□ 2.58
CHD9-208ENST00000563410 C8orf37Q96NL8 207 aa31.17■■■□□ 2.58
CHD9-208ENST00000563410 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
CHD9-208ENST00000563410 CDK12Q9NYV4 1490 aaPredicted RBP31.15■■■□□ 2.58
CHD9-208ENST00000563410 COL22A1Q8NFW1 1626 aaPredicted RBP31.14■■■□□ 2.58
CHD9-208ENST00000563410 PLEKHH1Q9ULM0 1364 aa31.14■■■□□ 2.58
CHD9-208ENST00000563410 ESCO1Q5FWF5 840 aa31.12■■■□□ 2.57
CHD9-208ENST00000563410 YTHDC2Q9H6S0 1430 aaKnown RBP31.12■■■□□ 2.57
CHD9-208ENST00000563410 NRXN1Q9ULB1 1477 aa31.12■■■□□ 2.57
CHD9-208ENST00000563410 FMN2Q9NZ56 1722 aa31.1■■■□□ 2.57
CHD9-208ENST00000563410 PXDNQ92626 1479 aa31.1■■■□□ 2.57
CHD9-208ENST00000563410 RAB3GAP2Q9H2M9 1393 aa31.1■■■□□ 2.57
CHD9-208ENST00000563410 ADAMTS2O95450 1211 aa31.1■■■□□ 2.57
CHD9-208ENST00000563410 UPF1Q92900 1129 aaKnown RBP eCLIP31.09■■■□□ 2.57
CHD9-208ENST00000563410 NPHP3Q7Z494 1330 aa31.08■■■□□ 2.57
CHD9-208ENST00000563410 QTRT2Q9H974 415 aaKnown RBP31.08■■■□□ 2.57
CHD9-208ENST00000563410 MYOM2P54296 1465 aa31.08■■■□□ 2.57
CHD9-208ENST00000563410 C14orf93Q9H972 538 aaKnown RBP31.07■■■□□ 2.56
CHD9-208ENST00000563410 NGLY1Q96IV0 654 aa31.06■■■□□ 2.56
CHD9-208ENST00000563410 NUTM2FA1L443 756 aa31.05■■■□□ 2.56
CHD9-208ENST00000563410 FOXO3O43524 673 aa31.04■■■□□ 2.56
CHD9-208ENST00000563410 RGS12O14924 1447 aa31.04■■■□□ 2.56
CHD9-208ENST00000563410 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
CHD9-208ENST00000563410 RBM6P78332 1123 aaKnown RBP31.03■■■□□ 2.56
CHD9-208ENST00000563410 SIRT1Q96EB6 747 aa31.03■■■□□ 2.56
CHD9-208ENST00000563410 MARF1Q9Y4F3 1742 aaKnown RBP31.03■■■□□ 2.56
CHD9-208ENST00000563410 CFAP70Q5T0N1 1121 aa31.02■■■□□ 2.56
CHD9-208ENST00000563410 XPCQ01831 940 aaPredicted RBP31.01■■■□□ 2.55
CHD9-208ENST00000563410 KIF1AQ12756 1690 aa31■■■□□ 2.55
CHD9-208ENST00000563410 DHX57Q6P158 1386 aaKnown RBP30.98■■■□□ 2.55
CHD9-208ENST00000563410 FNBP4Q8N3X1 1017 aaPredicted RBP30.97■■■□□ 2.55
CHD9-208ENST00000563410 USP21Q9UK80 565 aa30.97■■■□□ 2.55
CHD9-208ENST00000563410 DLC1Q96QB1 1528 aa30.92■■■□□ 2.54
CHD9-208ENST00000563410 ATRNO75882 1429 aa30.91■■■□□ 2.54
CHD9-208ENST00000563410 TRPC5Q9UL62 973 aaPredicted RBP30.91■■■□□ 2.54
CHD9-208ENST00000563410 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
CHD9-208ENST00000563410 PRAM1Q96QH2 718 aa30.89■■■□□ 2.54
CHD9-208ENST00000563410 SPATA31A3Q5VYP0 1347 aa30.89■■■□□ 2.54
CHD9-208ENST00000563410 BCL9LQ86UU0 1499 aa30.89■■■□□ 2.53
CHD9-208ENST00000563410 SAFB2Q14151 953 aaKnown RBP eCLIP30.87■■■□□ 2.53
CHD9-208ENST00000563410 KRT28Q7Z3Y7 464 aa30.86■■■□□ 2.53
CHD9-208ENST00000563410 USP32Q8NFA0 1604 aa30.86■■■□□ 2.53
CHD9-208ENST00000563410 ADGRB2O60241 1585 aa30.85■■■□□ 2.53
CHD9-208ENST00000563410 PHF8Q9UPP1 1060 aa30.85■■■□□ 2.53
CHD9-208ENST00000563410 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.84■■■□□ 2.53
CHD9-208ENST00000563410 HRCP23327 699 aa30.83■■■□□ 2.53
CHD9-208ENST00000563410 POGKQ9P215 609 aa30.81■■■□□ 2.52
CHD9-208ENST00000563410 DCAF11Q8TEB1 546 aa30.8■■■□□ 2.52
CHD9-208ENST00000563410 KDM2AQ9Y2K7 1162 aa30.8■■■□□ 2.52
CHD9-208ENST00000563410 TNS3Q68CZ2 1445 aa30.8■■■□□ 2.52
CHD9-208ENST00000563410 TRAK1Q9UPV9 953 aa30.79■■■□□ 2.52
CHD9-208ENST00000563410 SLIT2O94813 1529 aa30.78■■■□□ 2.52
CHD9-208ENST00000563410 ANKARQ7Z5J8 1434 aa30.78■■■□□ 2.52
CHD9-208ENST00000563410 ABCA3Q99758 1704 aa30.78■■■□□ 2.52
CHD9-208ENST00000563410 PSME1Q06323 249 aa30.76■■■□□ 2.51
CHD9-208ENST00000563410 ATAD2Q6PL18 1390 aa30.76■■■□□ 2.51
CHD9-208ENST00000563410 SBNO1A3KN83 1393 aa30.75■■■□□ 2.51
CHD9-208ENST00000563410 GJD4Q96KN9 370 aaPredicted RBP30.74■■■□□ 2.51
CHD9-208ENST00000563410 EP400Q96L91 3159 aa30.73■■■□□ 2.51
CHD9-208ENST00000563410 PMFBP1Q8TBY8 1022 aa30.73■■■□□ 2.51
CHD9-208ENST00000563410 STAC3Q96MF2 364 aa30.73■■■□□ 2.51
CHD9-208ENST00000563410 HIRIP3Q9BW71 556 aaPredicted RBP30.73■■■□□ 2.51
CHD9-208ENST00000563410 TRPM3Q9HCF6 1732 aaPredicted RBP30.73■■■□□ 2.51
CHD9-208ENST00000563410 GLI3P10071 1580 aa30.72■■■□□ 2.51
CHD9-208ENST00000563410 UNC5CLQ8IV45 518 aa30.72■■■□□ 2.51
CHD9-208ENST00000563410 ARHGEF28Q8N1W1 1705 aaKnown RBP30.72■■■□□ 2.51
CHD9-208ENST00000563410 CABLES1Q8TDN4 633 aa30.71■■■□□ 2.51
CHD9-208ENST00000563410 PLCH1Q4KWH8 1693 aa30.71■■■□□ 2.51
CHD9-208ENST00000563410 MINK1Q8N4C8 1332 aaPredicted RBP30.71■■■□□ 2.51
CHD9-208ENST00000563410 TULP4Q9NRJ4 1543 aa30.69■■■□□ 2.5
CHD9-208ENST00000563410 PRR36Q9H6K5 1346 aa30.69■■■□□ 2.5
CHD9-208ENST00000563410 NWD2Q9ULI1 1742 aa30.68■■■□□ 2.5
CHD9-208ENST00000563410 RALGAPBQ86X10 1494 aa30.68■■■□□ 2.5
CHD9-208ENST00000563410 ARHGEF10O15013 1369 aa30.67■■■□□ 2.5
CHD9-208ENST00000563410 ALS2Q96Q42 1657 aa30.67■■■□□ 2.5
CHD9-208ENST00000563410 WASLO00401 505 aaPredicted RBP30.65■■■□□ 2.5
CHD9-208ENST00000563410 HAP1P54257 671 aaPredicted RBP30.65■■■□□ 2.5
CHD9-208ENST00000563410 LMOD2Q6P5Q4 547 aa30.65■■■□□ 2.5
CHD9-208ENST00000563410 BRWD3Q6RI45 1802 aa30.65■■■□□ 2.5
CHD9-208ENST00000563410 EIF3AQ14152 1382 aaKnown RBP30.65■■■□□ 2.5
CHD9-208ENST00000563410 PLEKHG5O94827 1062 aa30.64■■■□□ 2.5
CHD9-208ENST00000563410 KIAA1210Q9ULL0 1709 aa30.6■■■□□ 2.49
CHD9-208ENST00000563410 ITSN1Q15811 1721 aa30.59■■■□□ 2.49
CHD9-208ENST00000563410 CRYBG1Q9Y4K1 1723 aa30.59■■■□□ 2.49
CHD9-208ENST00000563410 GPRASP1Q5JY77 1395 aa30.58■■■□□ 2.49
CHD9-208ENST00000563410 VPS72Q15906 364 aa30.58■■■□□ 2.49
CHD9-208ENST00000563410 ATP7BP35670 1465 aa30.57■■■□□ 2.48
CHD9-208ENST00000563410 NRAPQ86VF7 1730 aa30.56■■■□□ 2.48
CHD9-208ENST00000563410 FAM83GA6ND36 823 aa30.56■■■□□ 2.48
CHD9-208ENST00000563410 CCDC125Q86Z20 511 aa30.52■■■□□ 2.48
CHD9-208ENST00000563410 NGDNQ8NEJ9 315 aaKnown RBP30.52■■■□□ 2.48
CHD9-208ENST00000563410 COL14A1Q05707 1796 aaKnown RBP30.51■■■□□ 2.48
CHD9-208ENST00000563410 TOPAZ1Q8N9V7 1692 aa30.5■■■□□ 2.47
CHD9-208ENST00000563410 ONECUT3O60422 494 aaPredicted RBP30.5■■■□□ 2.47
CHD9-208ENST00000563410 SEPT12Q8IYM1 358 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms