RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
CX3CL1-202ENST00000563383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.04□□□□□ -0.32
CX3CL1-202ENST00000563383 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
CX3CL1-202ENST00000563383 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
CX3CL1-202ENST00000563383 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 FBLN1P23142 703 aa13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 E9PSI1 815 aa13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 AAMPQ13685 434 aa13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 ARID3AQ99856 593 aa13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
CX3CL1-202ENST00000563383 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.32
CX3CL1-202ENST00000563383 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.32
CX3CL1-202ENST00000563383 FGD1P98174 961 aa13.02□□□□□ -0.32
CX3CL1-202ENST00000563383 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
CX3CL1-202ENST00000563383 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 E9PCH4 1651 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 PRAM1Q96QH2 718 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 NPATQ14207 1427 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 UNC13BO14795 1591 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
CX3CL1-202ENST00000563383 TRAK2O60296 914 aa13□□□□□ -0.33
CX3CL1-202ENST00000563383 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
CX3CL1-202ENST00000563383 MYH16Q9H6N6 1097 aa13□□□□□ -0.33
CX3CL1-202ENST00000563383 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
CX3CL1-202ENST00000563383 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
CX3CL1-202ENST00000563383 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
CX3CL1-202ENST00000563383 USP19O94966 1318 aa12.99□□□□□ -0.33
CX3CL1-202ENST00000563383 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
CX3CL1-202ENST00000563383 MCM4P33991 863 aa12.99□□□□□ -0.33
CX3CL1-202ENST00000563383 RLBP1P12271 317 aa12.98□□□□□ -0.33
CX3CL1-202ENST00000563383 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
CX3CL1-202ENST00000563383 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
CX3CL1-202ENST00000563383 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
CX3CL1-202ENST00000563383 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-202ENST00000563383 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 ITPRIPQ8IWB1 547 aa12.97□□□□□ -0.33
CX3CL1-202ENST00000563383 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
CX3CL1-202ENST00000563383 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
CX3CL1-202ENST00000563383 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
CX3CL1-202ENST00000563383 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.33
CX3CL1-202ENST00000563383 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
CX3CL1-202ENST00000563383 MTHFSP49914 203 aa12.96□□□□□ -0.34
CX3CL1-202ENST00000563383 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
CX3CL1-202ENST00000563383 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
CX3CL1-202ENST00000563383 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
CX3CL1-202ENST00000563383 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
CX3CL1-202ENST00000563383 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
CX3CL1-202ENST00000563383 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
CX3CL1-202ENST00000563383 CEP152O94986 1710 aa12.94□□□□□ -0.34
CX3CL1-202ENST00000563383 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 NSD3Q9BZ95 1437 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
CX3CL1-202ENST00000563383 TRPM2O94759 1503 aa12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 PTPRTO14522 1441 aa12.92□□□□□ -0.34
CX3CL1-202ENST00000563383 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
CX3CL1-202ENST00000563383 SPHKAPQ2M3C7 1700 aa12.91□□□□□ -0.34
CX3CL1-202ENST00000563383 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
CX3CL1-202ENST00000563383 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
CX3CL1-202ENST00000563383 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.34
CX3CL1-202ENST00000563383 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
CX3CL1-202ENST00000563383 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.34
CX3CL1-202ENST00000563383 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
CX3CL1-202ENST00000563383 ESPNB1AK53 854 aa12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 MRE11P49959 708 aa12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 CDK19Q9BWU1 502 aa12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
CX3CL1-202ENST00000563383 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
CX3CL1-202ENST00000563383 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
CX3CL1-202ENST00000563383 DZIP1LQ8IYY4 767 aaKnown RBP12.88□□□□□ -0.35
CX3CL1-202ENST00000563383 TET3O43151 1660 aa12.88□□□□□ -0.35
CX3CL1-202ENST00000563383 EIF2AK4Q9P2K8 1649 aaKnown RBP12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
CX3CL1-202ENST00000563383 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms