RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 RXRBP28702 533 aa25.61■■□□□ 1.69
TSC2-219ENST00000563346 TMEM132EQ6IEE7 984 aa25.61■■□□□ 1.69
TSC2-219ENST00000563346 C8orf37Q96NL8 207 aa25.61■■□□□ 1.69
TSC2-219ENST00000563346 PIK3C2GO75747 1445 aa25.61■■□□□ 1.69
TSC2-219ENST00000563346 TECPR2O15040 1411 aa25.6■■□□□ 1.69
TSC2-219ENST00000563346 SOS2Q07890 1332 aaPredicted RBP25.6■■□□□ 1.69
TSC2-219ENST00000563346 ESCO1Q5FWF5 840 aa25.59■■□□□ 1.69
TSC2-219ENST00000563346 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
TSC2-219ENST00000563346 RAB3GAP2Q9H2M9 1393 aa25.58■■□□□ 1.69
TSC2-219ENST00000563346 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
TSC2-219ENST00000563346 KNDC1Q76NI1 1749 aa25.57■■□□□ 1.68
TSC2-219ENST00000563346 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
TSC2-219ENST00000563346 NPHP3Q7Z494 1330 aa25.55■■□□□ 1.68
TSC2-219ENST00000563346 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
TSC2-219ENST00000563346 NUTM2FA1L443 756 aa25.53■■□□□ 1.68
TSC2-219ENST00000563346 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
TSC2-219ENST00000563346 PLEKHH1Q9ULM0 1364 aa25.53■■□□□ 1.68
TSC2-219ENST00000563346 C14orf93Q9H972 538 aaKnown RBP25.52■■□□□ 1.68
TSC2-219ENST00000563346 MYOM2P54296 1465 aa25.51■■□□□ 1.67
TSC2-219ENST00000563346 QTRT2Q9H974 415 aaKnown RBP25.5■■□□□ 1.67
TSC2-219ENST00000563346 CDK12Q9NYV4 1490 aaPredicted RBP25.5■■□□□ 1.67
TSC2-219ENST00000563346 DHX57Q6P158 1386 aaKnown RBP25.49■■□□□ 1.67
TSC2-219ENST00000563346 FOXO3O43524 673 aa25.49■■□□□ 1.67
TSC2-219ENST00000563346 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
TSC2-219ENST00000563346 NRXN1Q9ULB1 1477 aa25.48■■□□□ 1.67
TSC2-219ENST00000563346 XPCQ01831 940 aaPredicted RBP25.47■■□□□ 1.67
TSC2-219ENST00000563346 SIRT1Q96EB6 747 aa25.47■■□□□ 1.67
TSC2-219ENST00000563346 COL22A1Q8NFW1 1626 aaPredicted RBP25.47■■□□□ 1.67
TSC2-219ENST00000563346 PXDNQ92626 1479 aa25.47■■□□□ 1.67
TSC2-219ENST00000563346 FMN2Q9NZ56 1722 aa25.46■■□□□ 1.67
TSC2-219ENST00000563346 RBM6P78332 1123 aaKnown RBP25.46■■□□□ 1.67
TSC2-219ENST00000563346 RGS12O14924 1447 aa25.44■■□□□ 1.66
TSC2-219ENST00000563346 USP21Q9UK80 565 aa25.43■■□□□ 1.66
TSC2-219ENST00000563346 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
TSC2-219ENST00000563346 SAFB2Q14151 953 aaKnown RBP eCLIP25.4■■□□□ 1.66
TSC2-219ENST00000563346 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
TSC2-219ENST00000563346 POGKQ9P215 609 aa25.39■■□□□ 1.66
TSC2-219ENST00000563346 TRPC5Q9UL62 973 aaPredicted RBP25.39■■□□□ 1.66
TSC2-219ENST00000563346 FNBP4Q8N3X1 1017 aaPredicted RBP25.38■■□□□ 1.65
TSC2-219ENST00000563346 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
TSC2-219ENST00000563346 HRCP23327 699 aa25.36■■□□□ 1.65
TSC2-219ENST00000563346 KRT28Q7Z3Y7 464 aa25.36■■□□□ 1.65
TSC2-219ENST00000563346 DCAF11Q8TEB1 546 aa25.36■■□□□ 1.65
TSC2-219ENST00000563346 DLC1Q96QB1 1528 aa25.36■■□□□ 1.65
TSC2-219ENST00000563346 RGPD8O14715 1765 aaPredicted RBP25.36■■□□□ 1.65
TSC2-219ENST00000563346 MARF1Q9Y4F3 1742 aaKnown RBP25.35■■□□□ 1.65
TSC2-219ENST00000563346 PHF8Q9UPP1 1060 aa25.35■■□□□ 1.65
TSC2-219ENST00000563346 SRCAPQ6ZRS2 3230 aa25.35■■□□□ 1.65
TSC2-219ENST00000563346 SPATA31A3Q5VYP0 1347 aa25.34■■□□□ 1.65
TSC2-219ENST00000563346 PSME1Q06323 249 aa25.33■■□□□ 1.65
TSC2-219ENST00000563346 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
TSC2-219ENST00000563346 ADGRB1O14514 1584 aa25.31■■□□□ 1.64
TSC2-219ENST00000563346 ATRNO75882 1429 aa25.3■■□□□ 1.64
TSC2-219ENST00000563346 STAC3Q96MF2 364 aa25.3■■□□□ 1.64
TSC2-219ENST00000563346 HAP1P54257 671 aaPredicted RBP25.29■■□□□ 1.64
TSC2-219ENST00000563346 TNS3Q68CZ2 1445 aa25.28■■□□□ 1.64
TSC2-219ENST00000563346 BCL9LQ86UU0 1499 aa25.28■■□□□ 1.64
TSC2-219ENST00000563346 ADGRB2O60241 1585 aa25.27■■□□□ 1.64
TSC2-219ENST00000563346 HIRIP3Q9BW71 556 aaPredicted RBP25.27■■□□□ 1.64
TSC2-219ENST00000563346 ANKARQ7Z5J8 1434 aa25.27■■□□□ 1.64
TSC2-219ENST00000563346 LMOD2Q6P5Q4 547 aa25.26■■□□□ 1.63
TSC2-219ENST00000563346 PLEKHG5O94827 1062 aa25.25■■□□□ 1.63
TSC2-219ENST00000563346 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
TSC2-219ENST00000563346 MINK1Q8N4C8 1332 aaPredicted RBP25.25■■□□□ 1.63
TSC2-219ENST00000563346 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
TSC2-219ENST00000563346 USP32Q8NFA0 1604 aa25.24■■□□□ 1.63
TSC2-219ENST00000563346 SBNO1A3KN83 1393 aa25.24■■□□□ 1.63
TSC2-219ENST00000563346 EIF3AQ14152 1382 aaKnown RBP25.23■■□□□ 1.63
TSC2-219ENST00000563346 GJD4Q96KN9 370 aaPredicted RBP25.22■■□□□ 1.63
TSC2-219ENST00000563346 ARHGEF10O15013 1369 aa25.21■■□□□ 1.63
TSC2-219ENST00000563346 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.21■■□□□ 1.63
TSC2-219ENST00000563346 UNC5CLQ8IV45 518 aa25.21■■□□□ 1.63
TSC2-219ENST00000563346 CABLES1Q8TDN4 633 aa25.21■■□□□ 1.63
TSC2-219ENST00000563346 SLIT2O94813 1529 aa25.19■■□□□ 1.62
TSC2-219ENST00000563346 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
TSC2-219ENST00000563346 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
TSC2-219ENST00000563346 TULP4Q9NRJ4 1543 aa25.17■■□□□ 1.62
TSC2-219ENST00000563346 PRR36Q9H6K5 1346 aa25.15■■□□□ 1.62
TSC2-219ENST00000563346 ARHGEF28Q8N1W1 1705 aaKnown RBP25.15■■□□□ 1.62
TSC2-219ENST00000563346 EP400Q96L91 3159 aa25.15■■□□□ 1.62
TSC2-219ENST00000563346 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
TSC2-219ENST00000563346 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
TSC2-219ENST00000563346 NGDNQ8NEJ9 315 aaKnown RBP25.13■■□□□ 1.61
TSC2-219ENST00000563346 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
TSC2-219ENST00000563346 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
TSC2-219ENST00000563346 GLI3P10071 1580 aa25.12■■□□□ 1.61
TSC2-219ENST00000563346 PLCH1Q4KWH8 1693 aa25.12■■□□□ 1.61
TSC2-219ENST00000563346 CCDC9Q9Y3X0 531 aaKnown RBP25.11■■□□□ 1.61
TSC2-219ENST00000563346 NWD2Q9ULI1 1742 aa25.1■■□□□ 1.61
TSC2-219ENST00000563346 ITSN1Q15811 1721 aa25.09■■□□□ 1.61
TSC2-219ENST00000563346 KIAA1210Q9ULL0 1709 aa25.09■■□□□ 1.61
TSC2-219ENST00000563346 ALS2Q96Q42 1657 aa25.08■■□□□ 1.61
TSC2-219ENST00000563346 PAK3O75914 559 aaPredicted RBP25.08■■□□□ 1.61
TSC2-219ENST00000563346 VPS72Q15906 364 aa25.08■■□□□ 1.61
TSC2-219ENST00000563346 NUDT16Q96DE0 195 aaKnown RBP25.07■■□□□ 1.6
TSC2-219ENST00000563346 FAM83GA6ND36 823 aa25.06■■□□□ 1.6
TSC2-219ENST00000563346 CCDC125Q86Z20 511 aa25.06■■□□□ 1.6
TSC2-219ENST00000563346 ATP7BP35670 1465 aa25.05■■□□□ 1.6
TSC2-219ENST00000563346 CDK19Q9BWU1 502 aa25.05■■□□□ 1.6
TSC2-219ENST00000563346 SEPT12Q8IYM1 358 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms