RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PUS10Q3MIT2 529 aaKnown RBP11.49□□□□□ -0.57
LINC00557-201ENST00000563184 MORN1Q5T089 497 aa11.49□□□□□ -0.57
LINC00557-201ENST00000563184 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
LINC00557-201ENST00000563184 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
LINC00557-201ENST00000563184 MCM6Q14566 821 aa11.48□□□□□ -0.57
LINC00557-201ENST00000563184 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
LINC00557-201ENST00000563184 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
LINC00557-201ENST00000563184 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
LINC00557-201ENST00000563184 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
LINC00557-201ENST00000563184 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
LINC00557-201ENST00000563184 TMEM259Q4ZIN3 620 aa11.45□□□□□ -0.58
LINC00557-201ENST00000563184 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
LINC00557-201ENST00000563184 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
LINC00557-201ENST00000563184 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
LINC00557-201ENST00000563184 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
LINC00557-201ENST00000563184 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
LINC00557-201ENST00000563184 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
LINC00557-201ENST00000563184 MTMR2Q13614 643 aa11.43□□□□□ -0.58
LINC00557-201ENST00000563184 ZMYND15Q9H091 742 aa11.42□□□□□ -0.58
LINC00557-201ENST00000563184 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
LINC00557-201ENST00000563184 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
LINC00557-201ENST00000563184 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
LINC00557-201ENST00000563184 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
LINC00557-201ENST00000563184 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
LINC00557-201ENST00000563184 AP1G2O75843 785 aa11.39□□□□□ -0.59
LINC00557-201ENST00000563184 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
LINC00557-201ENST00000563184 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
LINC00557-201ENST00000563184 USP17L8P0C7I0 530 aa11.38□□□□□ -0.59
LINC00557-201ENST00000563184 KCNC4Q03721 635 aa11.38□□□□□ -0.59
LINC00557-201ENST00000563184 SCUBE3Q8IX30 993 aa11.38□□□□□ -0.59
LINC00557-201ENST00000563184 A0A0G2JS52 829 aa11.37□□□□□ -0.59
LINC00557-201ENST00000563184 Q3C1V9 767 aa11.37□□□□□ -0.59
LINC00557-201ENST00000563184 CLUAP1Q96AJ1 413 aa11.37□□□□□ -0.59
LINC00557-201ENST00000563184 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
LINC00557-201ENST00000563184 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
LINC00557-201ENST00000563184 BRICD5Q6PL45 260 aa11.36□□□□□ -0.59
LINC00557-201ENST00000563184 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
LINC00557-201ENST00000563184 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
LINC00557-201ENST00000563184 NR1I2O75469 434 aa11.35□□□□□ -0.59
LINC00557-201ENST00000563184 RGS20O76081 388 aa11.35□□□□□ -0.59
LINC00557-201ENST00000563184 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
LINC00557-201ENST00000563184 POM121Q96HA1 1249 aa11.35□□□□□ -0.59
LINC00557-201ENST00000563184 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
LINC00557-201ENST00000563184 SOCS7O14512 581 aa11.33□□□□□ -0.6
LINC00557-201ENST00000563184 A6NJR5 290 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 COPS2P61201 443 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
LINC00557-201ENST00000563184 TSC1Q92574 1164 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
LINC00557-201ENST00000563184 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
LINC00557-201ENST00000563184 LRRN4Q8WUT4 740 aa11.31□□□□□ -0.6
LINC00557-201ENST00000563184 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
LINC00557-201ENST00000563184 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
LINC00557-201ENST00000563184 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
LINC00557-201ENST00000563184 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
LINC00557-201ENST00000563184 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
LINC00557-201ENST00000563184 DESI1Q6ICB0 168 aa11.29□□□□□ -0.6
LINC00557-201ENST00000563184 MTRQ99707 1265 aa11.29□□□□□ -0.6
LINC00557-201ENST00000563184 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
LINC00557-201ENST00000563184 TLL1O43897 1013 aa11.27□□□□□ -0.61
LINC00557-201ENST00000563184 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
LINC00557-201ENST00000563184 ZPR1O75312 459 aa11.26□□□□□ -0.61
LINC00557-201ENST00000563184 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
LINC00557-201ENST00000563184 GPR37L1O60883 481 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 SPSB2Q99619 263 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 GDPD2Q9HCC8 539 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
LINC00557-201ENST00000563184 RAD21O60216 631 aa11.24□□□□□ -0.61
LINC00557-201ENST00000563184 TRAK2O60296 914 aa11.24□□□□□ -0.61
LINC00557-201ENST00000563184 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
LINC00557-201ENST00000563184 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
LINC00557-201ENST00000563184 JUNDP17535 347 aa11.23□□□□□ -0.61
LINC00557-201ENST00000563184 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
LINC00557-201ENST00000563184 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
LINC00557-201ENST00000563184 APBB1O00213 710 aa11.21□□□□□ -0.61
LINC00557-201ENST00000563184 ADH1BP00325 375 aa11.21□□□□□ -0.61
LINC00557-201ENST00000563184 MMP16P51512 607 aa11.2□□□□□ -0.62
LINC00557-201ENST00000563184 NR6A1Q15406 480 aa11.2□□□□□ -0.62
LINC00557-201ENST00000563184 C1orf115Q9H7X2 142 aa11.2□□□□□ -0.62
LINC00557-201ENST00000563184 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
LINC00557-201ENST00000563184 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
LINC00557-201ENST00000563184 ABL2P42684 1182 aa11.19□□□□□ -0.62
LINC00557-201ENST00000563184 PTPRNQ16849 979 aa11.19□□□□□ -0.62
LINC00557-201ENST00000563184 IRF5Q13568 498 aa11.18□□□□□ -0.62
LINC00557-201ENST00000563184 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
LINC00557-201ENST00000563184 ARID3CA6NKF2 412 aa11.17□□□□□ -0.62
LINC00557-201ENST00000563184 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
LINC00557-201ENST00000563184 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
LINC00557-201ENST00000563184 GGCXP38435 758 aa11.14□□□□□ -0.63
LINC00557-201ENST00000563184 SLC6A16Q9GZN6 736 aa11.14□□□□□ -0.63
LINC00557-201ENST00000563184 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
LINC00557-201ENST00000563184 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
LINC00557-201ENST00000563184 ZNF777Q9ULD5 760 aaPredicted RBP11.13□□□□□ -0.63
LINC00557-201ENST00000563184 PPP1R18Q6NYC8 613 aa11.12□□□□□ -0.63
LINC00557-201ENST00000563184 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms