RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 CDC42BPGQ6DT37 1551 aa31.64■■■□□ 2.66
GGA2-204ENST00000563047 ADAMTS2O95450 1211 aa31.64■■■□□ 2.66
GGA2-204ENST00000563047 ANKRD30BQ9BXX2 1392 aa31.64■■■□□ 2.66
GGA2-204ENST00000563047 TECPR2O15040 1411 aa31.61■■■□□ 2.65
GGA2-204ENST00000563047 NGLY1Q96IV0 654 aa31.61■■■□□ 2.65
GGA2-204ENST00000563047 STK26Q9P289 416 aa31.61■■■□□ 2.65
GGA2-204ENST00000563047 RBM6P78332 1123 aaKnown RBP31.6■■■□□ 2.65
GGA2-204ENST00000563047 WAPLQ7Z5K2 1190 aa31.6■■■□□ 2.65
GGA2-204ENST00000563047 RGS12O14924 1447 aa31.59■■■□□ 2.65
GGA2-204ENST00000563047 LRPPRCP42704 1394 aaKnown RBP31.59■■■□□ 2.65
GGA2-204ENST00000563047 ESCO1Q5FWF5 840 aa31.59■■■□□ 2.65
GGA2-204ENST00000563047 PIK3C2GO75747 1445 aa31.58■■■□□ 2.65
GGA2-204ENST00000563047 COL22A1Q8NFW1 1626 aaPredicted RBP31.57■■■□□ 2.64
GGA2-204ENST00000563047 TMEM132EQ6IEE7 984 aa31.57■■■□□ 2.64
GGA2-204ENST00000563047 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
GGA2-204ENST00000563047 NPHP3Q7Z494 1330 aa31.56■■■□□ 2.64
GGA2-204ENST00000563047 KNDC1Q76NI1 1749 aa31.55■■■□□ 2.64
GGA2-204ENST00000563047 PLEKHH1Q9ULM0 1364 aa31.55■■■□□ 2.64
GGA2-204ENST00000563047 PXDNQ92626 1479 aa31.54■■■□□ 2.64
GGA2-204ENST00000563047 FOXO3O43524 673 aa31.52■■■□□ 2.64
GGA2-204ENST00000563047 NUTM2FA1L443 756 aa31.51■■■□□ 2.63
GGA2-204ENST00000563047 USP21Q9UK80 565 aa31.51■■■□□ 2.63
GGA2-204ENST00000563047 MYOM2P54296 1465 aa31.51■■■□□ 2.63
GGA2-204ENST00000563047 XPCQ01831 940 aaPredicted RBP31.5■■■□□ 2.63
GGA2-204ENST00000563047 FNBP4Q8N3X1 1017 aaPredicted RBP31.5■■■□□ 2.63
GGA2-204ENST00000563047 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
GGA2-204ENST00000563047 TRPC5Q9UL62 973 aaPredicted RBP31.46■■■□□ 2.63
GGA2-204ENST00000563047 C14orf93Q9H972 538 aaKnown RBP31.45■■■□□ 2.63
GGA2-204ENST00000563047 FMN2Q9NZ56 1722 aa31.45■■■□□ 2.63
GGA2-204ENST00000563047 ACIN1Q9UKV3 1341 aaKnown RBP31.45■■■□□ 2.62
GGA2-204ENST00000563047 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
GGA2-204ENST00000563047 ATRNO75882 1429 aa31.43■■■□□ 2.62
GGA2-204ENST00000563047 SIRT1Q96EB6 747 aa31.42■■■□□ 2.62
GGA2-204ENST00000563047 MARF1Q9Y4F3 1742 aaKnown RBP31.41■■■□□ 2.62
GGA2-204ENST00000563047 CFAP70Q5T0N1 1121 aa31.4■■■□□ 2.62
GGA2-204ENST00000563047 BCL9LQ86UU0 1499 aa31.39■■■□□ 2.62
GGA2-204ENST00000563047 KIF1AQ12756 1690 aa31.38■■■□□ 2.61
GGA2-204ENST00000563047 DHX57Q6P158 1386 aaKnown RBP31.36■■■□□ 2.61
GGA2-204ENST00000563047 SPATA31A3Q5VYP0 1347 aa31.36■■■□□ 2.61
GGA2-204ENST00000563047 RAB3GAP2Q9H2M9 1393 aa31.35■■■□□ 2.61
GGA2-204ENST00000563047 RGPD8O14715 1765 aaPredicted RBP31.33■■■□□ 2.61
GGA2-204ENST00000563047 ATAD2Q6PL18 1390 aa31.33■■■□□ 2.61
GGA2-204ENST00000563047 KRT28Q7Z3Y7 464 aa31.32■■■□□ 2.6
GGA2-204ENST00000563047 PRAM1Q96QH2 718 aa31.3■■■□□ 2.6
GGA2-204ENST00000563047 SAFB2Q14151 953 aaKnown RBP eCLIP31.29■■■□□ 2.6
GGA2-204ENST00000563047 PHF8Q9UPP1 1060 aa31.29■■■□□ 2.6
GGA2-204ENST00000563047 GJD4Q96KN9 370 aaPredicted RBP31.27■■■□□ 2.6
GGA2-204ENST00000563047 DLC1Q96QB1 1528 aa31.26■■■□□ 2.59
GGA2-204ENST00000563047 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.26■■■□□ 2.59
GGA2-204ENST00000563047 SLIT2O94813 1529 aa31.25■■■□□ 2.59
GGA2-204ENST00000563047 TNS3Q68CZ2 1445 aa31.24■■■□□ 2.59
GGA2-204ENST00000563047 ADGRB1O14514 1584 aa31.24■■■□□ 2.59
GGA2-204ENST00000563047 USP32Q8NFA0 1604 aa31.24■■■□□ 2.59
GGA2-204ENST00000563047 UNC5CLQ8IV45 518 aa31.23■■■□□ 2.59
GGA2-204ENST00000563047 PSME1Q06323 249 aa31.22■■■□□ 2.59
GGA2-204ENST00000563047 POGKQ9P215 609 aa31.22■■■□□ 2.59
GGA2-204ENST00000563047 SBNO1A3KN83 1393 aa31.19■■■□□ 2.58
GGA2-204ENST00000563047 GLI3P10071 1580 aa31.19■■■□□ 2.58
GGA2-204ENST00000563047 CABLES1Q8TDN4 633 aa31.19■■■□□ 2.58
GGA2-204ENST00000563047 EP400Q96L91 3159 aa31.19■■■□□ 2.58
GGA2-204ENST00000563047 ADGRB2O60241 1585 aa31.18■■■□□ 2.58
GGA2-204ENST00000563047 RALGAPBQ86X10 1494 aa31.18■■■□□ 2.58
GGA2-204ENST00000563047 ANKARQ7Z5J8 1434 aa31.17■■■□□ 2.58
GGA2-204ENST00000563047 TRAK1Q9UPV9 953 aa31.17■■■□□ 2.58
GGA2-204ENST00000563047 PMFBP1Q8TBY8 1022 aa31.16■■■□□ 2.58
GGA2-204ENST00000563047 KDM2AQ9Y2K7 1162 aa31.16■■■□□ 2.58
GGA2-204ENST00000563047 HAP1P54257 671 aaPredicted RBP31.15■■■□□ 2.58
GGA2-204ENST00000563047 PLEKHG5O94827 1062 aa31.14■■■□□ 2.58
GGA2-204ENST00000563047 DCAF11Q8TEB1 546 aa31.14■■■□□ 2.58
GGA2-204ENST00000563047 HIRIP3Q9BW71 556 aaPredicted RBP31.14■■■□□ 2.58
GGA2-204ENST00000563047 ABCA3Q99758 1704 aa31.13■■■□□ 2.57
GGA2-204ENST00000563047 LMOD2Q6P5Q4 547 aa31.13■■■□□ 2.57
GGA2-204ENST00000563047 ARHGEF10O15013 1369 aa31.13■■■□□ 2.57
GGA2-204ENST00000563047 PLCH1Q4KWH8 1693 aa31.1■■■□□ 2.57
GGA2-204ENST00000563047 MINK1Q8N4C8 1332 aaPredicted RBP31.1■■■□□ 2.57
GGA2-204ENST00000563047 CCDC125Q86Z20 511 aa31.1■■■□□ 2.57
GGA2-204ENST00000563047 PRR36Q9H6K5 1346 aa31.09■■■□□ 2.57
GGA2-204ENST00000563047 TRPM3Q9HCF6 1732 aaPredicted RBP31.08■■■□□ 2.57
GGA2-204ENST00000563047 NWD2Q9ULI1 1742 aa31.08■■■□□ 2.57
GGA2-204ENST00000563047 HRCP23327 699 aa31.07■■■□□ 2.56
GGA2-204ENST00000563047 VPS72Q15906 364 aa31.07■■■□□ 2.56
GGA2-204ENST00000563047 BRWD3Q6RI45 1802 aa31.06■■■□□ 2.56
GGA2-204ENST00000563047 STAC3Q96MF2 364 aa31.06■■■□□ 2.56
GGA2-204ENST00000563047 TULP4Q9NRJ4 1543 aa31.06■■■□□ 2.56
GGA2-204ENST00000563047 FAM83GA6ND36 823 aa31.04■■■□□ 2.56
GGA2-204ENST00000563047 WASLO00401 505 aaPredicted RBP31.04■■■□□ 2.56
GGA2-204ENST00000563047 EIF3AQ14152 1382 aaKnown RBP31.04■■■□□ 2.56
GGA2-204ENST00000563047 SEPT12Q8IYM1 358 aa31.03■■■□□ 2.56
GGA2-204ENST00000563047 ALS2Q96Q42 1657 aa31.03■■■□□ 2.56
GGA2-204ENST00000563047 GPRASP1Q5JY77 1395 aa31.01■■■□□ 2.55
GGA2-204ENST00000563047 ONECUT3O60422 494 aaPredicted RBP31■■■□□ 2.55
GGA2-204ENST00000563047 ZRANB1Q9UGI0 708 aa31■■■□□ 2.55
GGA2-204ENST00000563047 CCDC9Q9Y3X0 531 aaKnown RBP31■■■□□ 2.55
GGA2-204ENST00000563047 SRCAPQ6ZRS2 3230 aa31■■■□□ 2.55
GGA2-204ENST00000563047 BLMP54132 1417 aaPredicted RBP30.98■■■□□ 2.55
GGA2-204ENST00000563047 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
GGA2-204ENST00000563047 NRAPQ86VF7 1730 aa30.96■■■□□ 2.55
GGA2-204ENST00000563047 NGDNQ8NEJ9 315 aaKnown RBP30.94■■■□□ 2.54
GGA2-204ENST00000563047 BTG4Q9NY30 223 aa30.93■■■□□ 2.54
GGA2-204ENST00000563047 ATP7BP35670 1465 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms