RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 NSD2O96028 1365 aa28.27■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 RRP1P56182 461 aaKnown RBP28.27■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 MORC1Q86VD1 984 aa28.27■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 MLECQ14165 292 aa28.27■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 STK26Q9P289 416 aa28.27■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 B4GALNT3Q6L9W6 998 aa28.25■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 CDCA7LQ96GN5 454 aa28.24■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 RIMS2Q9UQ26 1411 aa28.24■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 NGEFQ8N5V2 710 aa28.24■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 ATAD2Q6PL18 1390 aa28.23■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 POGKQ9P215 609 aa28.23■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 ZMYM3Q14202 1370 aa28.21■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 CABP2Q9NPB3 220 aa28.21■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 DLC1Q96QB1 1528 aa28.2■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.2■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 PRAM1Q96QH2 718 aa28.2■■■□□ 2.11
VPS9D1-AS1-202ENST00000562866 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 ZNF521Q96K83 1311 aa28.19■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 SRPK2P78362 688 aaKnown RBP28.19■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 SAFB2Q14151 953 aaKnown RBP eCLIP28.19■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 CCDC136Q96JN2 1154 aa28.16■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 GOLGA2Q08379 1002 aa28.16■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 HDGFP51858 240 aaKnown RBP28.14■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 MINK1Q8N4C8 1332 aaPredicted RBP28.14■■■□□ 2.1
VPS9D1-AS1-202ENST00000562866 CFAP53Q96M91 514 aa28.14■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 TERF2IPQ9NYB0 399 aa28.14■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 SETD1AO15047 1707 aaKnown RBP28.12■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 ABCC11Q96J66 1382 aa28.12■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 CCDC146Q8IYE0 955 aa28.11■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 RBM19Q9Y4C8 960 aaKnown RBP28.11■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 TNRQ92752 1358 aa28.11■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 SHPRHQ149N8 1683 aa28.09■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 APAF1O14727 1248 aa28.09■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 DUSP27Q5VZP5 1158 aa28.09■■■□□ 2.09
VPS9D1-AS1-202ENST00000562866 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 MED14O60244 1454 aa28.06■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 HDGFL2Q7Z4V5 671 aaPredicted RBP28.06■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 CDK19Q9BWU1 502 aa28.06■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 MTHFSP49914 203 aa28.05■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 TRMT2AQ8IZ69 625 aaKnown RBP28.04■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 E9PSI1 815 aa28.02■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 EXOC6Q8TAG9 804 aa28.02■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 ANKRD26Q9UPS8 1709 aa28.02■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 CD163L1Q9NR16 1453 aa28.02■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 RUNDC1Q96C34 613 aa28.01■■■□□ 2.08
VPS9D1-AS1-202ENST00000562866 SIRT1Q96EB6 747 aa28■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 KNDC1Q76NI1 1749 aa27.99■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 UBR1Q8IWV7 1749 aa27.98■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 ATP7BP35670 1465 aa27.98■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.98■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 TMEM2Q9UHN6 1383 aa27.97■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 NCBP3Q53F19 620 aaKnown RBP27.96■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 NLRP1Q9C000 1473 aa27.96■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 TECPR2O15040 1411 aa27.96■■■□□ 2.07
VPS9D1-AS1-202ENST00000562866 WAPLQ7Z5K2 1190 aa27.95■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 METP08581 1390 aa27.94■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 FYB1O15117 783 aa27.94■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 CABP1Q9NZU7 370 aa27.94■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 GGNBP2Q9H3C7 697 aa27.93■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 WWC1Q8IX03 1113 aa27.92■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 KIF20BQ96Q89 1820 aa27.92■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 CPS1P31327 1500 aa27.91■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 PLIN1O60240 522 aa27.91■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 WASLO00401 505 aaPredicted RBP27.89■■■□□ 2.06
VPS9D1-AS1-202ENST00000562866 CCDC27Q2M243 656 aa27.88■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 TCP11L2Q8N4U5 519 aa27.88■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 CRBNQ96SW2 442 aa27.88■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 WDR63Q8IWG1 891 aa27.87■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 SPINK5Q9NQ38 1064 aaPredicted RBP27.87■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 U2AF1L5P0DN76 240 aaPredicted RBP27.86■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 U2AF1Q01081 240 aaKnown RBP eCLIP27.86■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 PHF23Q9BUL5 403 aaPredicted RBP27.86■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 COL3A1P02461 1466 aaPredicted RBP27.85■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 TRHP20396 242 aaPredicted RBP27.85■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 TXNDC2Q86VQ3 553 aa27.85■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 FANCIQ9NVI1 1328 aa27.84■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 ADGRB2O60241 1585 aa27.83■■■□□ 2.05
VPS9D1-AS1-202ENST00000562866 PPIP5K1Q6PFW1 1433 aa27.82■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 CPSF1Q10570 1443 aaKnown RBP27.82■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 EDC4Q6P2E9 1401 aaKnown RBP27.82■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 ADAMTS13Q76LX8 1427 aa27.82■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 DMRT2Q9Y5R5 561 aa27.81■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 PNNQ9H307 717 aaKnown RBP27.8■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 C3P01024 1663 aa27.79■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 NEUROD2Q15784 382 aa27.78■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 EID1Q9Y6B2 187 aa27.78■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 CDC42BPGQ6DT37 1551 aa27.78■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 NUDT16Q96DE0 195 aaKnown RBP27.78■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 RRP7AQ9Y3A4 280 aaKnown RBP27.78■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 C20orf194Q5TEA3 1177 aa27.77■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms