RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PRR20EP86478 221 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 PRR20CP86479 221 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 PRR20DP86480 221 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 PRR20BP86481 221 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 PRR20AP86496 221 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
SMG1-206ENST00000562668 USB1Q9BQ65 265 aaKnown RBP10.64□□□□□ -0.71
SMG1-206ENST00000562668 MMP16P51512 607 aa10.63□□□□□ -0.71
SMG1-206ENST00000562668 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
SMG1-206ENST00000562668 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
SMG1-206ENST00000562668 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
SMG1-206ENST00000562668 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
SMG1-206ENST00000562668 TRIM66O15016 1216 aa10.6□□□□□ -0.71
SMG1-206ENST00000562668 GDF9O60383 454 aa10.6□□□□□ -0.71
SMG1-206ENST00000562668 AK7Q96M32 723 aa10.6□□□□□ -0.71
SMG1-206ENST00000562668 FDX1P10109 184 aa10.58□□□□□ -0.72
SMG1-206ENST00000562668 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
SMG1-206ENST00000562668 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
SMG1-206ENST00000562668 ZBTB24O43167 697 aaPredicted RBP10.56□□□□□ -0.72
SMG1-206ENST00000562668 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
SMG1-206ENST00000562668 JUNDP17535 347 aa10.56□□□□□ -0.72
SMG1-206ENST00000562668 RETREG3Q86VR2 466 aa10.56□□□□□ -0.72
SMG1-206ENST00000562668 SYMPKQ92797 1274 aaKnown RBP10.56□□□□□ -0.72
SMG1-206ENST00000562668 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
SMG1-206ENST00000562668 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
SMG1-206ENST00000562668 FOXC1Q12948 553 aa10.55□□□□□ -0.72
SMG1-206ENST00000562668 PKDCCQ504Y2 493 aa10.55□□□□□ -0.72
SMG1-206ENST00000562668 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
SMG1-206ENST00000562668 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 DGAT1O75907 488 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 MS4A1P11836 297 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 NDUFV2P19404 249 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 TRIM32Q13049 653 aa10.53□□□□□ -0.72
SMG1-206ENST00000562668 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
SMG1-206ENST00000562668 PDE4DQ08499 809 aa10.51□□□□□ -0.73
SMG1-206ENST00000562668 CCDC24Q8N4L8 307 aa10.51□□□□□ -0.73
SMG1-206ENST00000562668 SLC24A3Q9HC58 644 aa10.51□□□□□ -0.73
SMG1-206ENST00000562668 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
SMG1-206ENST00000562668 TBC1D2Q9BYX2 928 aa10.5□□□□□ -0.73
SMG1-206ENST00000562668 GJA5P36382 358 aa10.48□□□□□ -0.73
SMG1-206ENST00000562668 MYT1Q01538 1121 aa10.48□□□□□ -0.73
SMG1-206ENST00000562668 RSBN1LQ6PCB5 846 aaPredicted RBP10.48□□□□□ -0.73
SMG1-206ENST00000562668 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
SMG1-206ENST00000562668 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
SMG1-206ENST00000562668 WNT7AO00755 349 aa10.47□□□□□ -0.73
SMG1-206ENST00000562668 MTMR2Q13614 643 aa10.47□□□□□ -0.73
SMG1-206ENST00000562668 CYP4X1Q8N118 509 aa10.47□□□□□ -0.73
SMG1-206ENST00000562668 BCANQ96GW7 911 aa10.47□□□□□ -0.73
SMG1-206ENST00000562668 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
SMG1-206ENST00000562668 PRR7Q8TB68 274 aa10.45□□□□□ -0.74
SMG1-206ENST00000562668 SPTLC1O15269 473 aa10.44□□□□□ -0.74
SMG1-206ENST00000562668 CCNYL3P0C7X3 344 aa10.44□□□□□ -0.74
SMG1-206ENST00000562668 PTPRNQ16849 979 aa10.44□□□□□ -0.74
SMG1-206ENST00000562668 WNT7BP56706 349 aa10.43□□□□□ -0.74
SMG1-206ENST00000562668 DESI1Q6ICB0 168 aa10.42□□□□□ -0.74
SMG1-206ENST00000562668 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
SMG1-206ENST00000562668 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
SMG1-206ENST00000562668 SKOR1P84550 965 aa10.41□□□□□ -0.74
SMG1-206ENST00000562668 RIC3Q7Z5B4 369 aa10.41□□□□□ -0.74
SMG1-206ENST00000562668 ZBTB3Q9H5J0 574 aa10.41□□□□□ -0.74
SMG1-206ENST00000562668 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
SMG1-206ENST00000562668 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
SMG1-206ENST00000562668 PCDHB15Q9Y5E8 787 aa10.4□□□□□ -0.74
SMG1-206ENST00000562668 AVPP01185 164 aa10.39□□□□□ -0.75
SMG1-206ENST00000562668 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
SMG1-206ENST00000562668 PRPF38BQ5VTL8 546 aaKnown RBP10.39□□□□□ -0.75
SMG1-206ENST00000562668 MYSM1Q5VVJ2 828 aa10.39□□□□□ -0.75
SMG1-206ENST00000562668 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
SMG1-206ENST00000562668 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
SMG1-206ENST00000562668 SNIP1Q8TAD8 396 aaKnown RBP10.39□□□□□ -0.75
SMG1-206ENST00000562668 HRCP23327 699 aa10.38□□□□□ -0.75
SMG1-206ENST00000562668 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
SMG1-206ENST00000562668 CFAP99D6REC4 459 aa10.37□□□□□ -0.75
SMG1-206ENST00000562668 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
SMG1-206ENST00000562668 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
SMG1-206ENST00000562668 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
SMG1-206ENST00000562668 SMPD1P17405 629 aa10.36□□□□□ -0.75
SMG1-206ENST00000562668 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
SMG1-206ENST00000562668 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
SMG1-206ENST00000562668 EVA1BQ9NVM1 165 aa10.36□□□□□ -0.75
SMG1-206ENST00000562668 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
SMG1-206ENST00000562668 TUSC1Q2TAM9 212 aa10.35□□□□□ -0.75
SMG1-206ENST00000562668 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
SMG1-206ENST00000562668 J3QL48 77 aa10.33□□□□□ -0.76
SMG1-206ENST00000562668 AXIN1O15169 862 aa10.33□□□□□ -0.76
SMG1-206ENST00000562668 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
SMG1-206ENST00000562668 SMCPP49901 116 aaPredicted RBP10.33□□□□□ -0.76
SMG1-206ENST00000562668 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
SMG1-206ENST00000562668 SH3BP2P78314 561 aa10.32□□□□□ -0.76
SMG1-206ENST00000562668 QPCTQ16769 361 aa10.32□□□□□ -0.76
SMG1-206ENST00000562668 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
SMG1-206ENST00000562668 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
SMG1-206ENST00000562668 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
SMG1-206ENST00000562668 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
SMG1-206ENST00000562668 LILRB3O75022 631 aa10.3□□□□□ -0.76
SMG1-206ENST00000562668 F12P00748 615 aaPredicted RBP10.3□□□□□ -0.76
SMG1-206ENST00000562668 CTHP32929 405 aa10.3□□□□□ -0.76
SMG1-206ENST00000562668 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
SMG1-206ENST00000562668 NUTM2AQ8IVF1 878 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms