RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 ERBB3P21860 1342 aa13.21□□□□□ -0.3
CCP110-206ENST00000562616 PLXNC1O60486 1568 aa13.21□□□□□ -0.3
CCP110-206ENST00000562616 HOXB3P14651 431 aaPredicted RBP13.2□□□□□ -0.3
CCP110-206ENST00000562616 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
CCP110-206ENST00000562616 NAIPQ13075 1403 aa13.2□□□□□ -0.3
CCP110-206ENST00000562616 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
CCP110-206ENST00000562616 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
CCP110-206ENST00000562616 REREQ9P2R6 1566 aa13.19□□□□□ -0.3
CCP110-206ENST00000562616 A2MP01023 1474 aa13.19□□□□□ -0.3
CCP110-206ENST00000562616 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
CCP110-206ENST00000562616 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
CCP110-206ENST00000562616 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
CCP110-206ENST00000562616 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
CCP110-206ENST00000562616 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
CCP110-206ENST00000562616 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
CCP110-206ENST00000562616 DHX57Q6P158 1386 aaKnown RBP13.16□□□□□ -0.3
CCP110-206ENST00000562616 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
CCP110-206ENST00000562616 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
CCP110-206ENST00000562616 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
CCP110-206ENST00000562616 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
CCP110-206ENST00000562616 MLECQ14165 292 aa13.15□□□□□ -0.31
CCP110-206ENST00000562616 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
CCP110-206ENST00000562616 DHX29Q7Z478 1369 aaKnown RBP13.14□□□□□ -0.31
CCP110-206ENST00000562616 AGLP35573 1532 aa13.14□□□□□ -0.31
CCP110-206ENST00000562616 DUOX2Q9NRD8 1548 aa13.14□□□□□ -0.31
CCP110-206ENST00000562616 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
CCP110-206ENST00000562616 E2F4Q16254 413 aa13.14□□□□□ -0.31
CCP110-206ENST00000562616 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
CCP110-206ENST00000562616 HSPA2P54652 639 aa13.12□□□□□ -0.31
CCP110-206ENST00000562616 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
CCP110-206ENST00000562616 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
CCP110-206ENST00000562616 G3V3G9 751 aa13.12□□□□□ -0.31
CCP110-206ENST00000562616 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
CCP110-206ENST00000562616 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
CCP110-206ENST00000562616 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
CCP110-206ENST00000562616 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
CCP110-206ENST00000562616 FER1L4A9Z1Z3 1794 aa13.11□□□□□ -0.31
CCP110-206ENST00000562616 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
CCP110-206ENST00000562616 KIF3BO15066 747 aa13.1□□□□□ -0.31
CCP110-206ENST00000562616 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
CCP110-206ENST00000562616 GGT6Q6P531 493 aa13.08□□□□□ -0.31
CCP110-206ENST00000562616 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
CCP110-206ENST00000562616 SEMA3EO15041 775 aa13.08□□□□□ -0.32
CCP110-206ENST00000562616 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
CCP110-206ENST00000562616 ZMYND10O75800 440 aa13.07□□□□□ -0.32
CCP110-206ENST00000562616 PTGER2P43116 358 aa13.07□□□□□ -0.32
CCP110-206ENST00000562616 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
CCP110-206ENST00000562616 PSEN1P49768 467 aa13.06□□□□□ -0.32
CCP110-206ENST00000562616 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
CCP110-206ENST00000562616 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
CCP110-206ENST00000562616 BOLA1Q9Y3E2 137 aa13.06□□□□□ -0.32
CCP110-206ENST00000562616 CLTCQ00610 1675 aaKnown RBP13.06□□□□□ -0.32
CCP110-206ENST00000562616 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
CCP110-206ENST00000562616 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
CCP110-206ENST00000562616 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
CCP110-206ENST00000562616 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
CCP110-206ENST00000562616 CEP152O94986 1710 aa13.04□□□□□ -0.32
CCP110-206ENST00000562616 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
CCP110-206ENST00000562616 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
CCP110-206ENST00000562616 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
CCP110-206ENST00000562616 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
CCP110-206ENST00000562616 KDM5DQ9BY66 1539 aa13.02□□□□□ -0.33
CCP110-206ENST00000562616 UNC13BO14795 1591 aa13.02□□□□□ -0.33
CCP110-206ENST00000562616 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
CCP110-206ENST00000562616 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
CCP110-206ENST00000562616 MROH2AA6NES4 1674 aa13.01□□□□□ -0.33
CCP110-206ENST00000562616 C3P01024 1663 aa13□□□□□ -0.33
CCP110-206ENST00000562616 ABCC3O15438 1527 aa13□□□□□ -0.33
CCP110-206ENST00000562616 WASHC2CQ9Y4E1 1318 aa13□□□□□ -0.33
CCP110-206ENST00000562616 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
CCP110-206ENST00000562616 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
CCP110-206ENST00000562616 KANK1Q14678 1352 aa12.99□□□□□ -0.33
CCP110-206ENST00000562616 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
CCP110-206ENST00000562616 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
CCP110-206ENST00000562616 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
CCP110-206ENST00000562616 CEBPAP49715 358 aaPredicted RBP12.98□□□□□ -0.33
CCP110-206ENST00000562616 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
CCP110-206ENST00000562616 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
CCP110-206ENST00000562616 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
CCP110-206ENST00000562616 PZPP20742 1482 aa12.96□□□□□ -0.34
CCP110-206ENST00000562616 ZMYND15Q9H091 742 aa12.96□□□□□ -0.34
CCP110-206ENST00000562616 NUP155O75694 1391 aa12.95□□□□□ -0.34
CCP110-206ENST00000562616 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
CCP110-206ENST00000562616 AK7Q96M32 723 aa12.95□□□□□ -0.34
CCP110-206ENST00000562616 TET3O43151 1660 aa12.94□□□□□ -0.34
CCP110-206ENST00000562616 NLRP6P59044 892 aa12.94□□□□□ -0.34
CCP110-206ENST00000562616 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
CCP110-206ENST00000562616 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
CCP110-206ENST00000562616 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
CCP110-206ENST00000562616 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
CCP110-206ENST00000562616 EFCAB6Q5THR3 1501 aa12.93□□□□□ -0.34
CCP110-206ENST00000562616 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
CCP110-206ENST00000562616 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
CCP110-206ENST00000562616 PPP1R37O75864 691 aa12.91□□□□□ -0.34
CCP110-206ENST00000562616 DISP3Q9P2K9 1392 aa12.91□□□□□ -0.34
CCP110-206ENST00000562616 E9PCH4 1651 aa12.91□□□□□ -0.34
CCP110-206ENST00000562616 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
CCP110-206ENST00000562616 SOCS7O14512 581 aa12.9□□□□□ -0.34
CCP110-206ENST00000562616 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
CCP110-206ENST00000562616 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms