RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 RXRBP28702 533 aa10.76□□□□□ -0.69
TCF4-213ENST00000562543 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
TCF4-213ENST00000562543 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
TCF4-213ENST00000562543 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
TCF4-213ENST00000562543 RGS12O14924 1447 aa10.75□□□□□ -0.69
TCF4-213ENST00000562543 MED14O60244 1454 aa10.74□□□□□ -0.69
TCF4-213ENST00000562543 DEPDC5O75140 1603 aa10.74□□□□□ -0.69
TCF4-213ENST00000562543 EP400Q96L91 3159 aa10.73□□□□□ -0.69
TCF4-213ENST00000562543 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
TCF4-213ENST00000562543 CLTCQ00610 1675 aaKnown RBP10.73□□□□□ -0.69
TCF4-213ENST00000562543 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
TCF4-213ENST00000562543 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
TCF4-213ENST00000562543 TK2O00142 265 aa10.72□□□□□ -0.69
TCF4-213ENST00000562543 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
TCF4-213ENST00000562543 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
TCF4-213ENST00000562543 JCADQ9P266 1359 aa10.72□□□□□ -0.69
TCF4-213ENST00000562543 PHLPP1O60346 1717 aa10.71□□□□□ -0.69
TCF4-213ENST00000562543 NPHP4O75161 1426 aaPredicted RBP10.71□□□□□ -0.69
TCF4-213ENST00000562543 YY1P25490 414 aa10.71□□□□□ -0.69
TCF4-213ENST00000562543 KCTD12Q96CX2 325 aaKnown RBP10.71□□□□□ -0.69
TCF4-213ENST00000562543 NHSL1Q5SYE7 1610 aa10.7□□□□□ -0.7
TCF4-213ENST00000562543 PLCH2O75038 1416 aa10.7□□□□□ -0.7
TCF4-213ENST00000562543 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
TCF4-213ENST00000562543 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
TCF4-213ENST00000562543 MLH3Q9UHC1 1453 aa10.69□□□□□ -0.7
TCF4-213ENST00000562543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.68□□□□□ -0.7
TCF4-213ENST00000562543 COL16A1Q07092 1604 aaPredicted RBP10.68□□□□□ -0.7
TCF4-213ENST00000562543 ATAD2Q6PL18 1390 aa10.67□□□□□ -0.7
TCF4-213ENST00000562543 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
TCF4-213ENST00000562543 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
TCF4-213ENST00000562543 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
TCF4-213ENST00000562543 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
TCF4-213ENST00000562543 PDE4AP27815 886 aa10.66□□□□□ -0.7
TCF4-213ENST00000562543 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
TCF4-213ENST00000562543 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
TCF4-213ENST00000562543 ABCC1P33527 1531 aa10.66□□□□□ -0.7
TCF4-213ENST00000562543 ZC3H13Q5T200 1668 aaKnown RBP10.66□□□□□ -0.7
TCF4-213ENST00000562543 MYO5CQ9NQX4 1742 aa10.65□□□□□ -0.7
TCF4-213ENST00000562543 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
TCF4-213ENST00000562543 SHPRHQ149N8 1683 aa10.64□□□□□ -0.71
TCF4-213ENST00000562543 LRRC9Q6ZRR7 1453 aa10.64□□□□□ -0.71
TCF4-213ENST00000562543 AFAP1Q8N556 730 aa10.64□□□□□ -0.71
TCF4-213ENST00000562543 KIDINS220Q9ULH0 1771 aa10.64□□□□□ -0.71
TCF4-213ENST00000562543 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
TCF4-213ENST00000562543 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
TCF4-213ENST00000562543 EVI5O60447 810 aa10.63□□□□□ -0.71
TCF4-213ENST00000562543 FOSBP53539 338 aa10.63□□□□□ -0.71
TCF4-213ENST00000562543 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
TCF4-213ENST00000562543 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
TCF4-213ENST00000562543 ANKLE2Q86XL3 938 aa10.63□□□□□ -0.71
TCF4-213ENST00000562543 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
TCF4-213ENST00000562543 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
TCF4-213ENST00000562543 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
TCF4-213ENST00000562543 FGD6Q6ZV73 1430 aa10.62□□□□□ -0.71
TCF4-213ENST00000562543 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
TCF4-213ENST00000562543 PTPN5P54829 565 aa10.62□□□□□ -0.71
TCF4-213ENST00000562543 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
TCF4-213ENST00000562543 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
TCF4-213ENST00000562543 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
TCF4-213ENST00000562543 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
TCF4-213ENST00000562543 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
TCF4-213ENST00000562543 EFCAB2Q5VUJ9 269 aa10.59□□□□□ -0.71
TCF4-213ENST00000562543 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
TCF4-213ENST00000562543 ADAM33Q9BZ11 813 aa10.59□□□□□ -0.71
TCF4-213ENST00000562543 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
TCF4-213ENST00000562543 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
TCF4-213ENST00000562543 KIF14Q15058 1648 aa10.58□□□□□ -0.72
TCF4-213ENST00000562543 SAMD9Q5K651 1589 aa10.58□□□□□ -0.72
TCF4-213ENST00000562543 PTPREP23469 700 aa10.58□□□□□ -0.72
TCF4-213ENST00000562543 RBM6P78332 1123 aaKnown RBP10.58□□□□□ -0.72
TCF4-213ENST00000562543 ATP7AQ04656 1500 aa10.58□□□□□ -0.72
TCF4-213ENST00000562543 BCL9LQ86UU0 1499 aa10.57□□□□□ -0.72
TCF4-213ENST00000562543 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
TCF4-213ENST00000562543 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
TCF4-213ENST00000562543 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
TCF4-213ENST00000562543 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
TCF4-213ENST00000562543 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
TCF4-213ENST00000562543 AFF2P51816 1311 aa10.56□□□□□ -0.72
TCF4-213ENST00000562543 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
TCF4-213ENST00000562543 UGGT1Q9NYU2 1555 aa10.55□□□□□ -0.72
TCF4-213ENST00000562543 TNRQ92752 1358 aa10.54□□□□□ -0.72
TCF4-213ENST00000562543 FAM135AQ9P2D6 1515 aa10.54□□□□□ -0.72
TCF4-213ENST00000562543 MFSD10Q14728 455 aa10.54□□□□□ -0.72
TCF4-213ENST00000562543 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
TCF4-213ENST00000562543 SLC4A5Q9BY07 1137 aa10.54□□□□□ -0.72
TCF4-213ENST00000562543 THEMISQ8N1K5 641 aaPredicted RBP10.53□□□□□ -0.72
TCF4-213ENST00000562543 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
TCF4-213ENST00000562543 PCDHGA10Q9Y5H3 936 aa10.52□□□□□ -0.73
TCF4-213ENST00000562543 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
TCF4-213ENST00000562543 TMEM94Q12767 1356 aa10.52□□□□□ -0.73
TCF4-213ENST00000562543 AHDC1Q5TGY3 1603 aaPredicted RBP10.51□□□□□ -0.73
TCF4-213ENST00000562543 NLRP1Q9C000 1473 aa10.51□□□□□ -0.73
TCF4-213ENST00000562543 HRCP23327 699 aa10.51□□□□□ -0.73
TCF4-213ENST00000562543 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
TCF4-213ENST00000562543 DIP2AQ14689 1571 aa10.51□□□□□ -0.73
TCF4-213ENST00000562543 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
TCF4-213ENST00000562543 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
TCF4-213ENST00000562543 WNT2BQ93097 391 aa10.5□□□□□ -0.73
TCF4-213ENST00000562543 QTRT2Q9H974 415 aaKnown RBP10.5□□□□□ -0.73
TCF4-213ENST00000562543 GOLGA8CPA6NN73 597 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms