RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
TSC2-218ENST00000562474 ATF3P18847 181 aa16.11■□□□□ 0.17
TSC2-218ENST00000562474 C19orf44Q9H6X5 657 aa16.11■□□□□ 0.17
TSC2-218ENST00000562474 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
TSC2-218ENST00000562474 MST1RQ04912 1400 aa16.11■□□□□ 0.17
TSC2-218ENST00000562474 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
TSC2-218ENST00000562474 HSPA1LP34931 641 aa16.1■□□□□ 0.17
TSC2-218ENST00000562474 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
TSC2-218ENST00000562474 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
TSC2-218ENST00000562474 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
TSC2-218ENST00000562474 POGKQ9P215 609 aa16.09■□□□□ 0.17
TSC2-218ENST00000562474 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
TSC2-218ENST00000562474 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.16
TSC2-218ENST00000562474 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
TSC2-218ENST00000562474 USP32Q8NFA0 1604 aa16.08■□□□□ 0.16
TSC2-218ENST00000562474 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
TSC2-218ENST00000562474 DCCP43146 1447 aa16.07■□□□□ 0.16
TSC2-218ENST00000562474 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
TSC2-218ENST00000562474 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
TSC2-218ENST00000562474 NHSL1Q5SYE7 1610 aa16.05■□□□□ 0.16
TSC2-218ENST00000562474 C1orf167Q5SNV9 1468 aa16.05■□□□□ 0.16
TSC2-218ENST00000562474 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
TSC2-218ENST00000562474 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
TSC2-218ENST00000562474 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
TSC2-218ENST00000562474 COL16A1Q07092 1604 aaPredicted RBP16.03■□□□□ 0.16
TSC2-218ENST00000562474 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
TSC2-218ENST00000562474 SIRT1Q96EB6 747 aa16■□□□□ 0.15
TSC2-218ENST00000562474 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
TSC2-218ENST00000562474 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
TSC2-218ENST00000562474 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
TSC2-218ENST00000562474 GPRASP1Q5JY77 1395 aa15.99■□□□□ 0.15
TSC2-218ENST00000562474 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
TSC2-218ENST00000562474 XPCQ01831 940 aaPredicted RBP15.98■□□□□ 0.15
TSC2-218ENST00000562474 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
TSC2-218ENST00000562474 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
TSC2-218ENST00000562474 TULP4Q9NRJ4 1543 aa15.98■□□□□ 0.15
TSC2-218ENST00000562474 PRR36Q9H6K5 1346 aa15.97■□□□□ 0.15
TSC2-218ENST00000562474 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
TSC2-218ENST00000562474 WASLO00401 505 aaPredicted RBP15.95■□□□□ 0.14
TSC2-218ENST00000562474 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
TSC2-218ENST00000562474 ATP7BP35670 1465 aa15.94■□□□□ 0.14
TSC2-218ENST00000562474 CDK19Q9BWU1 502 aa15.93■□□□□ 0.14
TSC2-218ENST00000562474 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
TSC2-218ENST00000562474 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
TSC2-218ENST00000562474 FOXO3O43524 673 aa15.92■□□□□ 0.14
TSC2-218ENST00000562474 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
TSC2-218ENST00000562474 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
TSC2-218ENST00000562474 PLEKHG5O94827 1062 aa15.91■□□□□ 0.14
TSC2-218ENST00000562474 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
TSC2-218ENST00000562474 PHF8Q9UPP1 1060 aa15.9■□□□□ 0.14
TSC2-218ENST00000562474 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
TSC2-218ENST00000562474 TRPM3Q9HCF6 1732 aaPredicted RBP15.9■□□□□ 0.14
TSC2-218ENST00000562474 PXDNQ92626 1479 aa15.9■□□□□ 0.14
TSC2-218ENST00000562474 USP47Q96K76 1375 aa15.89■□□□□ 0.13
TSC2-218ENST00000562474 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
TSC2-218ENST00000562474 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
TSC2-218ENST00000562474 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
TSC2-218ENST00000562474 AKAP12Q02952 1782 aa15.87■□□□□ 0.13
TSC2-218ENST00000562474 LRP6O75581 1613 aa15.86■□□□□ 0.13
TSC2-218ENST00000562474 ABCA3Q99758 1704 aa15.85■□□□□ 0.13
TSC2-218ENST00000562474 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
TSC2-218ENST00000562474 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
TSC2-218ENST00000562474 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
TSC2-218ENST00000562474 SOS2Q07890 1332 aaPredicted RBP15.85■□□□□ 0.13
TSC2-218ENST00000562474 NPHP3Q7Z494 1330 aa15.85■□□□□ 0.13
TSC2-218ENST00000562474 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
TSC2-218ENST00000562474 JCADQ9P266 1359 aa15.85■□□□□ 0.13
TSC2-218ENST00000562474 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
TSC2-218ENST00000562474 ALS2Q96Q42 1657 aa15.84■□□□□ 0.13
TSC2-218ENST00000562474 KRT28Q7Z3Y7 464 aa15.84■□□□□ 0.13
TSC2-218ENST00000562474 EVC2Q86UK5 1308 aa15.84■□□□□ 0.13
TSC2-218ENST00000562474 NGDNQ8NEJ9 315 aaKnown RBP15.83■□□□□ 0.12
TSC2-218ENST00000562474 DISP3Q9P2K9 1392 aa15.83■□□□□ 0.12
TSC2-218ENST00000562474 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
TSC2-218ENST00000562474 PSME1Q06323 249 aa15.82■□□□□ 0.12
TSC2-218ENST00000562474 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
TSC2-218ENST00000562474 TESK2Q96S53 571 aa15.82■□□□□ 0.12
TSC2-218ENST00000562474 COL22A1Q8NFW1 1626 aaPredicted RBP15.82■□□□□ 0.12
TSC2-218ENST00000562474 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
TSC2-218ENST00000562474 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 CRYBG1Q9Y4K1 1723 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 ACEP12821 1306 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 CABP1Q9NZU7 370 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
TSC2-218ENST00000562474 MYOM1P52179 1685 aa15.79■□□□□ 0.12
TSC2-218ENST00000562474 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
TSC2-218ENST00000562474 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
TSC2-218ENST00000562474 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
TSC2-218ENST00000562474 SPATA31A3Q5VYP0 1347 aa15.78■□□□□ 0.12
TSC2-218ENST00000562474 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
TSC2-218ENST00000562474 NUTM2GQ5VZR2 741 aa15.77■□□□□ 0.12
TSC2-218ENST00000562474 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
TSC2-218ENST00000562474 NRKQ7Z2Y5 1582 aa15.77■□□□□ 0.11
TSC2-218ENST00000562474 PHRF1Q9P1Y6 1649 aaKnown RBP15.76■□□□□ 0.11
TSC2-218ENST00000562474 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
TSC2-218ENST00000562474 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
TSC2-218ENST00000562474 POLR3GLQ9BT43 218 aa15.76■□□□□ 0.11
TSC2-218ENST00000562474 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
TSC2-218ENST00000562474 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms