RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
NIP7-203ENST00000562131 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
NIP7-203ENST00000562131 ABCC11Q96J66 1382 aa14□□□□□ -0.17
NIP7-203ENST00000562131 HRCP23327 699 aa14□□□□□ -0.17
NIP7-203ENST00000562131 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
NIP7-203ENST00000562131 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
NIP7-203ENST00000562131 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
NIP7-203ENST00000562131 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
NIP7-203ENST00000562131 NHSL1Q5SYE7 1610 aa13.99□□□□□ -0.17
NIP7-203ENST00000562131 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
NIP7-203ENST00000562131 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
NIP7-203ENST00000562131 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
NIP7-203ENST00000562131 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
NIP7-203ENST00000562131 TECPR2O15040 1411 aa13.97□□□□□ -0.17
NIP7-203ENST00000562131 SOS2Q07890 1332 aaPredicted RBP13.96□□□□□ -0.17
NIP7-203ENST00000562131 FOXO3O43524 673 aa13.96□□□□□ -0.17
NIP7-203ENST00000562131 SAFB2Q14151 953 aaKnown RBP eCLIP13.96□□□□□ -0.17
NIP7-203ENST00000562131 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.18
NIP7-203ENST00000562131 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
NIP7-203ENST00000562131 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
NIP7-203ENST00000562131 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
NIP7-203ENST00000562131 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
NIP7-203ENST00000562131 AFF2P51816 1311 aa13.94□□□□□ -0.18
NIP7-203ENST00000562131 MYOM2P54296 1465 aa13.94□□□□□ -0.18
NIP7-203ENST00000562131 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
NIP7-203ENST00000562131 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
NIP7-203ENST00000562131 POGKQ9P215 609 aa13.94□□□□□ -0.18
NIP7-203ENST00000562131 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
NIP7-203ENST00000562131 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
NIP7-203ENST00000562131 RXRBP28702 533 aa13.92□□□□□ -0.18
NIP7-203ENST00000562131 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
NIP7-203ENST00000562131 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
NIP7-203ENST00000562131 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
NIP7-203ENST00000562131 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
NIP7-203ENST00000562131 LAMC1P11047 1609 aa13.9□□□□□ -0.19
NIP7-203ENST00000562131 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
NIP7-203ENST00000562131 CLSPNQ9HAW4 1339 aa13.89□□□□□ -0.19
NIP7-203ENST00000562131 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
NIP7-203ENST00000562131 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
NIP7-203ENST00000562131 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
NIP7-203ENST00000562131 PXDNQ92626 1479 aa13.87□□□□□ -0.19
NIP7-203ENST00000562131 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
NIP7-203ENST00000562131 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
NIP7-203ENST00000562131 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
NIP7-203ENST00000562131 USP21Q9UK80 565 aa13.86□□□□□ -0.19
NIP7-203ENST00000562131 ADGRB1O14514 1584 aa13.85□□□□□ -0.19
NIP7-203ENST00000562131 ZEB1P37275 1124 aaPredicted RBP13.85□□□□□ -0.19
NIP7-203ENST00000562131 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
NIP7-203ENST00000562131 PSME1Q06323 249 aa13.85□□□□□ -0.19
NIP7-203ENST00000562131 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
NIP7-203ENST00000562131 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
NIP7-203ENST00000562131 DLC1Q96QB1 1528 aa13.84□□□□□ -0.19
NIP7-203ENST00000562131 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
NIP7-203ENST00000562131 FNBP4Q8N3X1 1017 aaPredicted RBP13.83□□□□□ -0.2
NIP7-203ENST00000562131 RGPD8O14715 1765 aaPredicted RBP13.82□□□□□ -0.2
NIP7-203ENST00000562131 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
NIP7-203ENST00000562131 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
NIP7-203ENST00000562131 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
NIP7-203ENST00000562131 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
NIP7-203ENST00000562131 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
NIP7-203ENST00000562131 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
NIP7-203ENST00000562131 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
NIP7-203ENST00000562131 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
NIP7-203ENST00000562131 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
NIP7-203ENST00000562131 NBPF1Q3BBV0 1214 aa13.79□□□□□ -0.2
NIP7-203ENST00000562131 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
NIP7-203ENST00000562131 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
NIP7-203ENST00000562131 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
NIP7-203ENST00000562131 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
NIP7-203ENST00000562131 RGS12O14924 1447 aa13.78□□□□□ -0.2
NIP7-203ENST00000562131 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
NIP7-203ENST00000562131 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
NIP7-203ENST00000562131 ADGRB2O60241 1585 aa13.77□□□□□ -0.21
NIP7-203ENST00000562131 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.21
NIP7-203ENST00000562131 USP32Q8NFA0 1604 aa13.77□□□□□ -0.21
NIP7-203ENST00000562131 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
NIP7-203ENST00000562131 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
NIP7-203ENST00000562131 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
NIP7-203ENST00000562131 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
NIP7-203ENST00000562131 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
NIP7-203ENST00000562131 ATRNO75882 1429 aa13.75□□□□□ -0.21
NIP7-203ENST00000562131 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
NIP7-203ENST00000562131 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
NIP7-203ENST00000562131 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
NIP7-203ENST00000562131 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
NIP7-203ENST00000562131 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
NIP7-203ENST00000562131 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
NIP7-203ENST00000562131 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
NIP7-203ENST00000562131 SLIT2O94813 1529 aa13.71□□□□□ -0.21
NIP7-203ENST00000562131 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
NIP7-203ENST00000562131 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
NIP7-203ENST00000562131 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
NIP7-203ENST00000562131 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
NIP7-203ENST00000562131 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
NIP7-203ENST00000562131 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
NIP7-203ENST00000562131 ACEP12821 1306 aa13.69□□□□□ -0.22
NIP7-203ENST00000562131 ATP7BP35670 1465 aa13.69□□□□□ -0.22
NIP7-203ENST00000562131 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
NIP7-203ENST00000562131 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
NIP7-203ENST00000562131 TONSLQ96HA7 1378 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms