RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 STK26Q9P289 416 aa17.73■□□□□ 0.43
NSMCE1-202ENST00000561960 ESCO1Q5FWF5 840 aa17.72■□□□□ 0.43
NSMCE1-202ENST00000561960 BRWD3Q6RI45 1802 aa17.72■□□□□ 0.43
NSMCE1-202ENST00000561960 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-202ENST00000561960 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
NSMCE1-202ENST00000561960 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
NSMCE1-202ENST00000561960 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
NSMCE1-202ENST00000561960 PXDNQ92626 1479 aa17.69■□□□□ 0.42
NSMCE1-202ENST00000561960 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 FOXO3O43524 673 aa17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 ATRNO75882 1429 aa17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 CDC42BPGQ6DT37 1551 aa17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 TRPC5Q9UL62 973 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-202ENST00000561960 PLEKHH1Q9ULM0 1364 aa17.67■□□□□ 0.42
NSMCE1-202ENST00000561960 MYOM2P54296 1465 aa17.67■□□□□ 0.42
NSMCE1-202ENST00000561960 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
NSMCE1-202ENST00000561960 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
NSMCE1-202ENST00000561960 HFM1A2PYH4 1435 aa17.65■□□□□ 0.42
NSMCE1-202ENST00000561960 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
NSMCE1-202ENST00000561960 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
NSMCE1-202ENST00000561960 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
NSMCE1-202ENST00000561960 GLI3P10071 1580 aa17.63■□□□□ 0.41
NSMCE1-202ENST00000561960 FNBP4Q8N3X1 1017 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-202ENST00000561960 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
NSMCE1-202ENST00000561960 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
NSMCE1-202ENST00000561960 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
NSMCE1-202ENST00000561960 NPHP3Q7Z494 1330 aa17.61■□□□□ 0.41
NSMCE1-202ENST00000561960 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
NSMCE1-202ENST00000561960 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
NSMCE1-202ENST00000561960 CABLES1Q8TDN4 633 aa17.59■□□□□ 0.41
NSMCE1-202ENST00000561960 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.41
NSMCE1-202ENST00000561960 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
NSMCE1-202ENST00000561960 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
NSMCE1-202ENST00000561960 SAFB2Q14151 953 aaKnown RBP eCLIP17.58■□□□□ 0.4
NSMCE1-202ENST00000561960 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
NSMCE1-202ENST00000561960 KIF1AQ12756 1690 aa17.58■□□□□ 0.4
NSMCE1-202ENST00000561960 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
NSMCE1-202ENST00000561960 CCDC144AA2RUR9 1427 aa17.56■□□□□ 0.4
NSMCE1-202ENST00000561960 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
NSMCE1-202ENST00000561960 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
NSMCE1-202ENST00000561960 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
NSMCE1-202ENST00000561960 SPATA31E1Q6ZUB1 1445 aa17.54■□□□□ 0.4
NSMCE1-202ENST00000561960 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
NSMCE1-202ENST00000561960 KRT28Q7Z3Y7 464 aa17.53■□□□□ 0.4
NSMCE1-202ENST00000561960 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
NSMCE1-202ENST00000561960 SLIT2O94813 1529 aa17.52■□□□□ 0.4
NSMCE1-202ENST00000561960 SPATA31A3Q5VYP0 1347 aa17.52■□□□□ 0.4
NSMCE1-202ENST00000561960 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.4
NSMCE1-202ENST00000561960 YTHDC2Q9H6S0 1430 aaKnown RBP17.52■□□□□ 0.4
NSMCE1-202ENST00000561960 TECPR2O15040 1411 aa17.51■□□□□ 0.39
NSMCE1-202ENST00000561960 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
NSMCE1-202ENST00000561960 A0A0G2JS52 829 aa17.5■□□□□ 0.39
NSMCE1-202ENST00000561960 MYT1Q01538 1121 aa17.5■□□□□ 0.39
NSMCE1-202ENST00000561960 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
NSMCE1-202ENST00000561960 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
NSMCE1-202ENST00000561960 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
NSMCE1-202ENST00000561960 NWD2Q9ULI1 1742 aa17.48■□□□□ 0.39
NSMCE1-202ENST00000561960 CFAP70Q5T0N1 1121 aa17.48■□□□□ 0.39
NSMCE1-202ENST00000561960 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
NSMCE1-202ENST00000561960 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
NSMCE1-202ENST00000561960 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
NSMCE1-202ENST00000561960 PHF8Q9UPP1 1060 aa17.47■□□□□ 0.39
NSMCE1-202ENST00000561960 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
NSMCE1-202ENST00000561960 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
NSMCE1-202ENST00000561960 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
NSMCE1-202ENST00000561960 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
NSMCE1-202ENST00000561960 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
NSMCE1-202ENST00000561960 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
NSMCE1-202ENST00000561960 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
NSMCE1-202ENST00000561960 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
NSMCE1-202ENST00000561960 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
NSMCE1-202ENST00000561960 PSME1Q06323 249 aa17.42■□□□□ 0.38
NSMCE1-202ENST00000561960 FAM98CQ17RN3 349 aaKnown RBP17.42■□□□□ 0.38
NSMCE1-202ENST00000561960 CCDC125Q86Z20 511 aa17.42■□□□□ 0.38
NSMCE1-202ENST00000561960 SF3B2Q13435 895 aaKnown RBP17.41■□□□□ 0.38
NSMCE1-202ENST00000561960 VPS72Q15906 364 aa17.41■□□□□ 0.38
NSMCE1-202ENST00000561960 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
NSMCE1-202ENST00000561960 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
NSMCE1-202ENST00000561960 CRYBG1Q9Y4K1 1723 aa17.4■□□□□ 0.38
NSMCE1-202ENST00000561960 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
NSMCE1-202ENST00000561960 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
NSMCE1-202ENST00000561960 POGKQ9P215 609 aa17.39■□□□□ 0.37
NSMCE1-202ENST00000561960 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
NSMCE1-202ENST00000561960 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
NSMCE1-202ENST00000561960 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
NSMCE1-202ENST00000561960 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
NSMCE1-202ENST00000561960 RGPD1P0DJD0 1748 aa17.37■□□□□ 0.37
NSMCE1-202ENST00000561960 TNS1Q9HBL0 1735 aaKnown RBP17.37■□□□□ 0.37
NSMCE1-202ENST00000561960 LRP5O75197 1615 aa17.36■□□□□ 0.37
NSMCE1-202ENST00000561960 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
NSMCE1-202ENST00000561960 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 PRR36Q9H6K5 1346 aa17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
NSMCE1-202ENST00000561960 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
NSMCE1-202ENST00000561960 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms