RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 LRP6O75581 1613 aa12.24□□□□□ -0.45
GINS3-204ENST00000561952 DDX17Q92841 729 aaKnown RBP12.24□□□□□ -0.45
GINS3-204ENST00000561952 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
GINS3-204ENST00000561952 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
GINS3-204ENST00000561952 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
GINS3-204ENST00000561952 STK26Q9P289 416 aa12.23□□□□□ -0.45
GINS3-204ENST00000561952 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
GINS3-204ENST00000561952 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
GINS3-204ENST00000561952 POTEAQ6S8J7 498 aa12.22□□□□□ -0.45
GINS3-204ENST00000561952 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
GINS3-204ENST00000561952 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
GINS3-204ENST00000561952 C1orf167Q5SNV9 1468 aa12.2□□□□□ -0.46
GINS3-204ENST00000561952 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
GINS3-204ENST00000561952 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
GINS3-204ENST00000561952 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
GINS3-204ENST00000561952 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
GINS3-204ENST00000561952 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
GINS3-204ENST00000561952 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
GINS3-204ENST00000561952 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
GINS3-204ENST00000561952 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
GINS3-204ENST00000561952 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
GINS3-204ENST00000561952 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
GINS3-204ENST00000561952 KCNA4P22459 653 aa12.16□□□□□ -0.46
GINS3-204ENST00000561952 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
GINS3-204ENST00000561952 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
GINS3-204ENST00000561952 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
GINS3-204ENST00000561952 LAMC1P11047 1609 aa12.15□□□□□ -0.47
GINS3-204ENST00000561952 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
GINS3-204ENST00000561952 CFAP70Q5T0N1 1121 aa12.14□□□□□ -0.47
GINS3-204ENST00000561952 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
GINS3-204ENST00000561952 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
GINS3-204ENST00000561952 MYOM2P54296 1465 aa12.14□□□□□ -0.47
GINS3-204ENST00000561952 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
GINS3-204ENST00000561952 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
GINS3-204ENST00000561952 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
GINS3-204ENST00000561952 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
GINS3-204ENST00000561952 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
GINS3-204ENST00000561952 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
GINS3-204ENST00000561952 TECPR2O15040 1411 aa12.12□□□□□ -0.47
GINS3-204ENST00000561952 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
GINS3-204ENST00000561952 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
GINS3-204ENST00000561952 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
GINS3-204ENST00000561952 AFF2P51816 1311 aa12.11□□□□□ -0.47
GINS3-204ENST00000561952 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
GINS3-204ENST00000561952 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
GINS3-204ENST00000561952 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
GINS3-204ENST00000561952 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
GINS3-204ENST00000561952 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
GINS3-204ENST00000561952 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
GINS3-204ENST00000561952 SOS2Q07890 1332 aaPredicted RBP12.09□□□□□ -0.47
GINS3-204ENST00000561952 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 FOXO3O43524 673 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 PXDNQ92626 1479 aa12.08□□□□□ -0.48
GINS3-204ENST00000561952 POGKQ9P215 609 aa12.07□□□□□ -0.48
GINS3-204ENST00000561952 COL22A1Q8NFW1 1626 aaPredicted RBP12.07□□□□□ -0.48
GINS3-204ENST00000561952 RXRBP28702 533 aa12.06□□□□□ -0.48
GINS3-204ENST00000561952 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
GINS3-204ENST00000561952 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
GINS3-204ENST00000561952 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
GINS3-204ENST00000561952 MARF1Q9Y4F3 1742 aaKnown RBP12.06□□□□□ -0.48
GINS3-204ENST00000561952 ADGRB1O14514 1584 aa12.05□□□□□ -0.48
GINS3-204ENST00000561952 DLC1Q96QB1 1528 aa12.04□□□□□ -0.48
GINS3-204ENST00000561952 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
GINS3-204ENST00000561952 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
GINS3-204ENST00000561952 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
GINS3-204ENST00000561952 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
GINS3-204ENST00000561952 RGS12O14924 1447 aa12.03□□□□□ -0.48
GINS3-204ENST00000561952 ADGRB2O60241 1585 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 USP21Q9UK80 565 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
GINS3-204ENST00000561952 HRCP23327 699 aa12.01□□□□□ -0.49
GINS3-204ENST00000561952 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
GINS3-204ENST00000561952 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
GINS3-204ENST00000561952 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
GINS3-204ENST00000561952 ABCA3Q99758 1704 aa12□□□□□ -0.49
GINS3-204ENST00000561952 RBM6P78332 1123 aaKnown RBP11.99□□□□□ -0.49
GINS3-204ENST00000561952 SPATA31A3Q5VYP0 1347 aa11.99□□□□□ -0.49
GINS3-204ENST00000561952 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
GINS3-204ENST00000561952 CDK12Q9NYV4 1490 aaPredicted RBP11.99□□□□□ -0.49
GINS3-204ENST00000561952 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
GINS3-204ENST00000561952 TULP4Q9NRJ4 1543 aa11.97□□□□□ -0.49
GINS3-204ENST00000561952 PSME1Q06323 249 aa11.97□□□□□ -0.49
GINS3-204ENST00000561952 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
GINS3-204ENST00000561952 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
GINS3-204ENST00000561952 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
GINS3-204ENST00000561952 ATRNO75882 1429 aa11.96□□□□□ -0.49
GINS3-204ENST00000561952 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.49
GINS3-204ENST00000561952 PRR36Q9H6K5 1346 aa11.96□□□□□ -0.49
GINS3-204ENST00000561952 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.49
GINS3-204ENST00000561952 TRPM3Q9HCF6 1732 aaPredicted RBP11.96□□□□□ -0.49
GINS3-204ENST00000561952 KIAA1210Q9ULL0 1709 aa11.96□□□□□ -0.49
GINS3-204ENST00000561952 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
GINS3-204ENST00000561952 POLA2Q14181 598 aa11.95□□□□□ -0.5
GINS3-204ENST00000561952 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms