RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 GGCXP38435 758 aa10.06□□□□□ -0.8
AP4E1-206ENST00000561397 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
AP4E1-206ENST00000561397 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
AP4E1-206ENST00000561397 LIMD1Q9UGP4 676 aa10.06□□□□□ -0.8
AP4E1-206ENST00000561397 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
AP4E1-206ENST00000561397 USP46P62068 366 aa10.05□□□□□ -0.8
AP4E1-206ENST00000561397 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
AP4E1-206ENST00000561397 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
AP4E1-206ENST00000561397 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
AP4E1-206ENST00000561397 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
AP4E1-206ENST00000561397 HOXA2O43364 376 aa10.04□□□□□ -0.8
AP4E1-206ENST00000561397 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
AP4E1-206ENST00000561397 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
AP4E1-206ENST00000561397 SPSB2Q99619 263 aa10.04□□□□□ -0.8
AP4E1-206ENST00000561397 NDUFV2P19404 249 aa10.02□□□□□ -0.81
AP4E1-206ENST00000561397 FAM160A2Q8N612 972 aaPredicted RBP10.02□□□□□ -0.81
AP4E1-206ENST00000561397 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
AP4E1-206ENST00000561397 SLC6A16Q9GZN6 736 aa10.02□□□□□ -0.81
AP4E1-206ENST00000561397 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
AP4E1-206ENST00000561397 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
AP4E1-206ENST00000561397 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
AP4E1-206ENST00000561397 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
AP4E1-206ENST00000561397 RNF19BQ6ZMZ0 732 aa10□□□□□ -0.81
AP4E1-206ENST00000561397 Q6ZNB5 142 aa10□□□□□ -0.81
AP4E1-206ENST00000561397 HLA-CQ95604 372 aa10□□□□□ -0.81
AP4E1-206ENST00000561397 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
AP4E1-206ENST00000561397 PCDHB15Q9Y5E8 787 aa9.99□□□□□ -0.81
AP4E1-206ENST00000561397 GFRA3O60609 400 aa9.98□□□□□ -0.81
AP4E1-206ENST00000561397 LILRB3O75022 631 aa9.98□□□□□ -0.81
AP4E1-206ENST00000561397 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
AP4E1-206ENST00000561397 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
AP4E1-206ENST00000561397 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
AP4E1-206ENST00000561397 SLC19A1P41440 591 aa9.97□□□□□ -0.81
AP4E1-206ENST00000561397 PRDM9Q9NQV7 894 aa9.97□□□□□ -0.81
AP4E1-206ENST00000561397 FDX1P10109 184 aa9.96□□□□□ -0.82
AP4E1-206ENST00000561397 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
AP4E1-206ENST00000561397 QPCTQ16769 361 aa9.96□□□□□ -0.82
AP4E1-206ENST00000561397 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
AP4E1-206ENST00000561397 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
AP4E1-206ENST00000561397 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
AP4E1-206ENST00000561397 LCE2BO14633 110 aa9.94□□□□□ -0.82
AP4E1-206ENST00000561397 RFC5P40937 340 aa9.94□□□□□ -0.82
AP4E1-206ENST00000561397 SPRYD7Q5W111 196 aa9.94□□□□□ -0.82
AP4E1-206ENST00000561397 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
AP4E1-206ENST00000561397 MSS51Q4VC12 460 aa9.93□□□□□ -0.82
AP4E1-206ENST00000561397 HRCP23327 699 aa9.92□□□□□ -0.82
AP4E1-206ENST00000561397 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
AP4E1-206ENST00000561397 CSPP1Q1MSJ5 1256 aa9.91□□□□□ -0.82
AP4E1-206ENST00000561397 Q3C1V9 767 aa9.91□□□□□ -0.82
AP4E1-206ENST00000561397 RTL5Q5HYW3 569 aaPredicted RBP9.91□□□□□ -0.82
AP4E1-206ENST00000561397 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
AP4E1-206ENST00000561397 ZBTB3Q9H5J0 574 aa9.91□□□□□ -0.82
AP4E1-206ENST00000561397 FCF1Q9Y324 198 aaKnown RBP9.91□□□□□ -0.82
AP4E1-206ENST00000561397 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
AP4E1-206ENST00000561397 NRG2O14511 850 aaPredicted RBP9.89□□□□□ -0.83
AP4E1-206ENST00000561397 MMP16P51512 607 aa9.89□□□□□ -0.83
AP4E1-206ENST00000561397 FLIIQ13045 1269 aa9.89□□□□□ -0.83
AP4E1-206ENST00000561397 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
AP4E1-206ENST00000561397 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
AP4E1-206ENST00000561397 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
AP4E1-206ENST00000561397 PDZRN3Q9UPQ7 1066 aa9.89□□□□□ -0.83
AP4E1-206ENST00000561397 MTMR2Q13614 643 aa9.88□□□□□ -0.83
AP4E1-206ENST00000561397 MCM6Q14566 821 aa9.87□□□□□ -0.83
AP4E1-206ENST00000561397 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
AP4E1-206ENST00000561397 ZNF697Q5TEC3 545 aa9.87□□□□□ -0.83
AP4E1-206ENST00000561397 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
AP4E1-206ENST00000561397 DXOO77932 396 aaKnown RBP9.86□□□□□ -0.83
AP4E1-206ENST00000561397 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
AP4E1-206ENST00000561397 ATP1B4Q9UN42 357 aaPredicted RBP9.86□□□□□ -0.83
AP4E1-206ENST00000561397 CFAP99D6REC4 459 aa9.85□□□□□ -0.83
AP4E1-206ENST00000561397 GDF9O60383 454 aa9.85□□□□□ -0.83
AP4E1-206ENST00000561397 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-206ENST00000561397 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-206ENST00000561397 SOCS7O14512 581 aa9.84□□□□□ -0.83
AP4E1-206ENST00000561397 RPIAP49247 311 aa9.84□□□□□ -0.83
AP4E1-206ENST00000561397 NUTM2DQ5VT03 806 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-206ENST00000561397 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
AP4E1-206ENST00000561397 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PRR20EP86478 221 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PRR20CP86479 221 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PRR20DP86480 221 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PRR20BP86481 221 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PRR20AP86496 221 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 PKD2L1Q9P0L9 805 aa9.83□□□□□ -0.84
AP4E1-206ENST00000561397 TRAF7Q6Q0C0 670 aa9.82□□□□□ -0.84
AP4E1-206ENST00000561397 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
AP4E1-206ENST00000561397 MTMR14Q8NCE2 650 aa9.81□□□□□ -0.84
AP4E1-206ENST00000561397 DESI1Q6ICB0 168 aa9.8□□□□□ -0.84
AP4E1-206ENST00000561397 PRR7Q8TB68 274 aa9.8□□□□□ -0.84
AP4E1-206ENST00000561397 AP1G2O75843 785 aa9.79□□□□□ -0.84
AP4E1-206ENST00000561397 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
AP4E1-206ENST00000561397 CTDSPL2Q05D32 466 aa9.79□□□□□ -0.84
AP4E1-206ENST00000561397 JUNDP17535 347 aa9.78□□□□□ -0.84
AP4E1-206ENST00000561397 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
AP4E1-206ENST00000561397 CD2BP2O95400 341 aaKnown RBP9.77□□□□□ -0.85
AP4E1-206ENST00000561397 FOXC1Q12948 553 aa9.76□□□□□ -0.85
AP4E1-206ENST00000561397 GJD4Q96KN9 370 aaPredicted RBP9.76□□□□□ -0.85
AP4E1-206ENST00000561397 TRIM32Q13049 653 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms