RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PSME1Q06323 249 aa14.97□□□□□ -0.01
TPM1-229ENST00000561242 WASLO00401 505 aaPredicted RBP14.96□□□□□ -0.01
TPM1-229ENST00000561242 NGDNQ8NEJ9 315 aaKnown RBP14.96□□□□□ -0.01
TPM1-229ENST00000561242 ADGRL3Q9HAR2 1447 aa14.95□□□□□ -0.02
TPM1-229ENST00000561242 TMF1P82094 1093 aa14.95□□□□□ -0.02
TPM1-229ENST00000561242 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
TPM1-229ENST00000561242 TECPR2O15040 1411 aa14.94□□□□□ -0.02
TPM1-229ENST00000561242 DCCP43146 1447 aa14.94□□□□□ -0.02
TPM1-229ENST00000561242 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
TPM1-229ENST00000561242 NWD1Q149M9 1564 aa14.94□□□□□ -0.02
TPM1-229ENST00000561242 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
TPM1-229ENST00000561242 LMOD2Q6P5Q4 547 aa14.93□□□□□ -0.02
TPM1-229ENST00000561242 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
TPM1-229ENST00000561242 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
TPM1-229ENST00000561242 GPRASP1Q5JY77 1395 aa14.91□□□□□ -0.02
TPM1-229ENST00000561242 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
TPM1-229ENST00000561242 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
TPM1-229ENST00000561242 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
TPM1-229ENST00000561242 NRXN3Q9Y4C0 1643 aa14.91□□□□□ -0.02
TPM1-229ENST00000561242 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
TPM1-229ENST00000561242 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
TPM1-229ENST00000561242 NUDT16Q96DE0 195 aaKnown RBP14.9□□□□□ -0.02
TPM1-229ENST00000561242 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
TPM1-229ENST00000561242 DLC1Q96QB1 1528 aa14.9□□□□□ -0.02
TPM1-229ENST00000561242 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
TPM1-229ENST00000561242 BRINP3Q76B58 766 aa14.89□□□□□ -0.03
TPM1-229ENST00000561242 IFT172Q9UG01 1749 aa14.89□□□□□ -0.03
TPM1-229ENST00000561242 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
TPM1-229ENST00000561242 FOXO3O43524 673 aa14.88□□□□□ -0.03
TPM1-229ENST00000561242 HSPA1LP34931 641 aa14.88□□□□□ -0.03
TPM1-229ENST00000561242 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
TPM1-229ENST00000561242 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
TPM1-229ENST00000561242 ORAI2Q96SN7 254 aa14.88□□□□□ -0.03
TPM1-229ENST00000561242 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
TPM1-229ENST00000561242 USP47Q96K76 1375 aa14.87□□□□□ -0.03
TPM1-229ENST00000561242 MEX3CQ5U5Q3 659 aaKnown RBP14.87□□□□□ -0.03
TPM1-229ENST00000561242 KRT28Q7Z3Y7 464 aa14.86□□□□□ -0.03
TPM1-229ENST00000561242 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
TPM1-229ENST00000561242 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
TPM1-229ENST00000561242 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
TPM1-229ENST00000561242 ATAD2Q6PL18 1390 aa14.85□□□□□ -0.03
TPM1-229ENST00000561242 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
TPM1-229ENST00000561242 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
TPM1-229ENST00000561242 KIAA1210Q9ULL0 1709 aa14.84□□□□□ -0.03
TPM1-229ENST00000561242 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
TPM1-229ENST00000561242 ANKARQ7Z5J8 1434 aa14.83□□□□□ -0.03
TPM1-229ENST00000561242 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
TPM1-229ENST00000561242 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
TPM1-229ENST00000561242 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
TPM1-229ENST00000561242 CABP1Q9NZU7 370 aa14.82□□□□□ -0.04
TPM1-229ENST00000561242 MST1RQ04912 1400 aa14.82□□□□□ -0.04
TPM1-229ENST00000561242 ASXL1Q8IXJ9 1541 aa14.82□□□□□ -0.04
TPM1-229ENST00000561242 NUTM2BA6NNL0 878 aaPredicted RBP14.81□□□□□ -0.04
TPM1-229ENST00000561242 NUTM2EB1AL46 878 aaPredicted RBP14.81□□□□□ -0.04
TPM1-229ENST00000561242 XPCQ01831 940 aaPredicted RBP14.81□□□□□ -0.04
TPM1-229ENST00000561242 NUTM2AQ8IVF1 878 aaPredicted RBP14.81□□□□□ -0.04
TPM1-229ENST00000561242 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
TPM1-229ENST00000561242 JCADQ9P266 1359 aa14.79□□□□□ -0.04
TPM1-229ENST00000561242 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
TPM1-229ENST00000561242 PLEKHG3A1L390 1219 aa14.78□□□□□ -0.04
TPM1-229ENST00000561242 DDX17Q92841 729 aaKnown RBP14.78□□□□□ -0.04
TPM1-229ENST00000561242 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
TPM1-229ENST00000561242 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
TPM1-229ENST00000561242 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.04
TPM1-229ENST00000561242 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.04
TPM1-229ENST00000561242 ACEP12821 1306 aa14.77□□□□□ -0.04
TPM1-229ENST00000561242 ABTB2Q8N961 1025 aa14.77□□□□□ -0.05
TPM1-229ENST00000561242 PPIP5K1Q6PFW1 1433 aa14.76□□□□□ -0.05
TPM1-229ENST00000561242 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
TPM1-229ENST00000561242 SPATA31A6Q5VVP1 1343 aa14.75□□□□□ -0.05
TPM1-229ENST00000561242 NLRP13Q86W25 1043 aa14.75□□□□□ -0.05
TPM1-229ENST00000561242 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
TPM1-229ENST00000561242 NINLQ9Y2I6 1382 aa14.74□□□□□ -0.05
TPM1-229ENST00000561242 TULP4Q9NRJ4 1543 aa14.74□□□□□ -0.05
TPM1-229ENST00000561242 SOS2Q07890 1332 aaPredicted RBP14.73□□□□□ -0.05
TPM1-229ENST00000561242 TESK2Q96S53 571 aa14.73□□□□□ -0.05
TPM1-229ENST00000561242 SLC12A5Q9H2X9 1139 aa14.73□□□□□ -0.05
TPM1-229ENST00000561242 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
TPM1-229ENST00000561242 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
TPM1-229ENST00000561242 NLRP6P59044 892 aa14.72□□□□□ -0.05
TPM1-229ENST00000561242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPM1-229ENST00000561242 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
TPM1-229ENST00000561242 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
TPM1-229ENST00000561242 ADAMTS2O95450 1211 aa14.71□□□□□ -0.05
TPM1-229ENST00000561242 NGLY1Q96IV0 654 aa14.71□□□□□ -0.05
TPM1-229ENST00000561242 SBNO1A3KN83 1393 aa14.71□□□□□ -0.06
TPM1-229ENST00000561242 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
TPM1-229ENST00000561242 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
TPM1-229ENST00000561242 TTC21AQ8NDW8 1320 aa14.69□□□□□ -0.06
TPM1-229ENST00000561242 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
TPM1-229ENST00000561242 KNSTRNQ9Y448 316 aa14.69□□□□□ -0.06
TPM1-229ENST00000561242 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
TPM1-229ENST00000561242 ADGRB2O60241 1585 aa14.68□□□□□ -0.06
TPM1-229ENST00000561242 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
TPM1-229ENST00000561242 COG3Q96JB2 828 aa14.68□□□□□ -0.06
TPM1-229ENST00000561242 C8orf37Q96NL8 207 aa14.68□□□□□ -0.06
TPM1-229ENST00000561242 ARHGEF28Q8N1W1 1705 aaKnown RBP14.68□□□□□ -0.06
TPM1-229ENST00000561242 EVA1CP58658 441 aa14.67□□□□□ -0.06
TPM1-229ENST00000561242 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
TPM1-229ENST00000561242 ZNF772Q68DY9 489 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms