RNA–Protein interactions for RNA: ENST00000560868.1

CHRNB4-206, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 547 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-206ENST00000560868 PKDCCQ504Y2 493 aa6.87□□□□□ -1.31
CHRNB4-206ENST00000560868 ZNF775Q96BV0 537 aaPredicted RBP6.87□□□□□ -1.31
CHRNB4-206ENST00000560868 NR1I2O75469 434 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 DGAT1O75907 488 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 ADH1BP00325 375 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 PRR20EP86478 221 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 PRR20CP86479 221 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 PRR20DP86480 221 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 PRR20BP86481 221 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 PRR20AP86496 221 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 ZNF697Q5TEC3 545 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 SCUBE3Q8IX30 993 aa6.86□□□□□ -1.31
CHRNB4-206ENST00000560868 BEGAINQ9BUH8 593 aa6.85□□□□□ -1.31
CHRNB4-206ENST00000560868 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
CHRNB4-206ENST00000560868 TNFRSF10AO00220 468 aa6.84□□□□□ -1.31
CHRNB4-206ENST00000560868 GDF9O60383 454 aa6.84□□□□□ -1.31
CHRNB4-206ENST00000560868 CD46P15529 392 aa6.84□□□□□ -1.31
CHRNB4-206ENST00000560868 PUS10Q3MIT2 529 aaKnown RBP6.84□□□□□ -1.31
CHRNB4-206ENST00000560868 SULF1Q8IWU6 871 aa6.84□□□□□ -1.31
CHRNB4-206ENST00000560868 PLA2G2CQ5R387 149 aa6.83□□□□□ -1.32
CHRNB4-206ENST00000560868 RSPH4AQ5TD94 716 aa6.83□□□□□ -1.32
CHRNB4-206ENST00000560868 RSPH6AQ9H0K4 717 aa6.83□□□□□ -1.32
CHRNB4-206ENST00000560868 FAM187AA6NFU0 413 aa6.82□□□□□ -1.32
CHRNB4-206ENST00000560868 POTECB2RU33 542 aa6.82□□□□□ -1.32
CHRNB4-206ENST00000560868 DIXDC1Q155Q3 683 aa6.82□□□□□ -1.32
CHRNB4-206ENST00000560868 SPSB2Q99619 263 aa6.82□□□□□ -1.32
CHRNB4-206ENST00000560868 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
CHRNB4-206ENST00000560868 MYSM1Q5VVJ2 828 aa6.8□□□□□ -1.32
CHRNB4-206ENST00000560868 DDX11L8A8MPP1 907 aa6.79□□□□□ -1.32
CHRNB4-206ENST00000560868 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
CHRNB4-206ENST00000560868 PCMTD1Q96MG8 357 aaPredicted RBP6.79□□□□□ -1.32
CHRNB4-206ENST00000560868 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
CHRNB4-206ENST00000560868 HRCP23327 699 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 GJA5P36382 358 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 FOXC1Q12948 553 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 TUSC1Q2TAM9 212 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 RDH13Q8NBN7 331 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 SPIRE2Q8WWL2 714 aa6.78□□□□□ -1.32
CHRNB4-206ENST00000560868 FUT2Q10981 343 aa6.77□□□□□ -1.33
CHRNB4-206ENST00000560868 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHRNB4-206ENST00000560868 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
CHRNB4-206ENST00000560868 SPTLC1O15269 473 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 ST8SIA5O15466 376 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 GCGRP47871 477 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 CLK2P49760 499 aaKnown RBP6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 USP46P62068 366 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 MORN1Q5T089 497 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 AAASQ9NRG9 546 aa6.76□□□□□ -1.33
CHRNB4-206ENST00000560868 CD2BP2O95400 341 aaKnown RBP6.75□□□□□ -1.33
CHRNB4-206ENST00000560868 ATP6V1AP38606 617 aa6.75□□□□□ -1.33
CHRNB4-206ENST00000560868 THAP11Q96EK4 314 aa6.75□□□□□ -1.33
CHRNB4-206ENST00000560868 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
CHRNB4-206ENST00000560868 KDM4AO75164 1064 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 RPIAP49247 311 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 RSBN1LQ6PCB5 846 aaPredicted RBP6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 NUTM1Q86Y26 1132 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 PROCA1Q8NCQ7 364 aaPredicted RBP6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 POLR3EQ9NVU0 708 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 LIMD1Q9UGP4 676 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 SLC27A5Q9Y2P5 690 aa6.74□□□□□ -1.33
CHRNB4-206ENST00000560868 MOXD2PA6NHM9 499 aa6.73□□□□□ -1.33
CHRNB4-206ENST00000560868 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
CHRNB4-206ENST00000560868 PPP2R2DQ66LE6 453 aa6.73□□□□□ -1.33
CHRNB4-206ENST00000560868 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
CHRNB4-206ENST00000560868 HOXA2O43364 376 aa6.72□□□□□ -1.33
CHRNB4-206ENST00000560868 HMGB1P09429 215 aaKnown RBP6.72□□□□□ -1.33
CHRNB4-206ENST00000560868 TOR4AQ9NXH8 423 aa6.72□□□□□ -1.33
CHRNB4-206ENST00000560868 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 FLIIQ13045 1269 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 BRICD5Q6PL45 260 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 CYP4X1Q8N118 509 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 PRDM9Q9NQV7 894 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 DACH1Q9UI36 760 aa6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 SALL2Q9Y467 1007 aaPredicted RBP6.71□□□□□ -1.34
CHRNB4-206ENST00000560868 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
CHRNB4-206ENST00000560868 CRIPAKQ8N1N5 446 aa6.7□□□□□ -1.34
CHRNB4-206ENST00000560868 ZBTB24O43167 697 aaPredicted RBP6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 LILRB3O75022 631 aa6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 AVPP01185 164 aa6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 NDUFV2P19404 249 aa6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 FBXO31Q5XUX0 539 aaPredicted RBP6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 TREML4Q6UXN2 200 aa6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 RNF19BQ6ZMZ0 732 aa6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 CDK11AQ9UQ88 783 aaPredicted RBP6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 CCDC9Q9Y3X0 531 aaKnown RBP6.69□□□□□ -1.34
CHRNB4-206ENST00000560868 AXIN1O15169 862 aa6.68□□□□□ -1.34
CHRNB4-206ENST00000560868 RFC5P40937 340 aa6.68□□□□□ -1.34
CHRNB4-206ENST00000560868 MCM6Q14566 821 aa6.68□□□□□ -1.34
CHRNB4-206ENST00000560868 GRIPAP1Q4V328 841 aa6.68□□□□□ -1.34
CHRNB4-206ENST00000560868 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
CHRNB4-206ENST00000560868 SHROOM4Q9ULL8 1493 aa6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 FDX1P10109 184 aa6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 QPCTQ16769 361 aa6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 BANK1Q8NDB2 785 aa6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 GMPR2Q9P2T1 348 aaKnown RBP6.67□□□□□ -1.34
CHRNB4-206ENST00000560868 PCDHGC3Q9UN70 934 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms