RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 ABCC3O15438 1527 aa22.99■■□□□ 1.27
TRPM1-211ENST00000560658 C20orf194Q5TEA3 1177 aa22.99■■□□□ 1.27
TRPM1-211ENST00000560658 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
TRPM1-211ENST00000560658 ARHGAP31Q2M1Z3 1444 aa22.97■■□□□ 1.27
TRPM1-211ENST00000560658 NSD3Q9BZ95 1437 aa22.97■■□□□ 1.27
TRPM1-211ENST00000560658 MORC1Q86VD1 984 aa22.96■■□□□ 1.27
TRPM1-211ENST00000560658 NPM2Q86SE8 214 aaKnown RBP22.95■■□□□ 1.26
TRPM1-211ENST00000560658 CFAP53Q96M91 514 aa22.95■■□□□ 1.26
TRPM1-211ENST00000560658 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
TRPM1-211ENST00000560658 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 NBR1Q14596 966 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 CAMSAP1Q5T5Y3 1602 aa22.94■■□□□ 1.26
TRPM1-211ENST00000560658 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
TRPM1-211ENST00000560658 WDR63Q8IWG1 891 aa22.93■■□□□ 1.26
TRPM1-211ENST00000560658 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
TRPM1-211ENST00000560658 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
TRPM1-211ENST00000560658 ZMYM3Q14202 1370 aa22.91■■□□□ 1.26
TRPM1-211ENST00000560658 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
TRPM1-211ENST00000560658 WWC1Q8IX03 1113 aa22.9■■□□□ 1.26
TRPM1-211ENST00000560658 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
TRPM1-211ENST00000560658 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
TRPM1-211ENST00000560658 GLI2P10070 1586 aa22.89■■□□□ 1.26
TRPM1-211ENST00000560658 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
TRPM1-211ENST00000560658 MAPK8IP3Q9UPT6 1336 aa22.88■■□□□ 1.25
TRPM1-211ENST00000560658 TRAK1Q9UPV9 953 aa22.87■■□□□ 1.25
TRPM1-211ENST00000560658 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
TRPM1-211ENST00000560658 CT47B1P0C2W7 299 aaPredicted RBP22.86■■□□□ 1.25
TRPM1-211ENST00000560658 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
TRPM1-211ENST00000560658 SLC52A1Q9NWF4 448 aa22.85■■□□□ 1.25
TRPM1-211ENST00000560658 DAXXQ9UER7 740 aaPredicted RBP22.85■■□□□ 1.25
TRPM1-211ENST00000560658 ARHGEF28Q8N1W1 1705 aaKnown RBP22.84■■□□□ 1.25
TRPM1-211ENST00000560658 C8orf34Q49A92 452 aa22.83■■□□□ 1.25
TRPM1-211ENST00000560658 GGT6Q6P531 493 aa22.83■■□□□ 1.25
TRPM1-211ENST00000560658 PMFBP1Q8TBY8 1022 aa22.82■■□□□ 1.24
TRPM1-211ENST00000560658 CLUAP1Q96AJ1 413 aa22.82■■□□□ 1.24
TRPM1-211ENST00000560658 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
TRPM1-211ENST00000560658 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
TRPM1-211ENST00000560658 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
TRPM1-211ENST00000560658 BCAR3O75815 825 aa22.81■■□□□ 1.24
TRPM1-211ENST00000560658 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
TRPM1-211ENST00000560658 TULP4Q9NRJ4 1543 aa22.81■■□□□ 1.24
TRPM1-211ENST00000560658 MED14O60244 1454 aa22.8■■□□□ 1.24
TRPM1-211ENST00000560658 TCP11L2Q8N4U5 519 aa22.79■■□□□ 1.24
TRPM1-211ENST00000560658 ADGRB2O60241 1585 aa22.78■■□□□ 1.24
TRPM1-211ENST00000560658 NEFMP07197 916 aa22.78■■□□□ 1.24
TRPM1-211ENST00000560658 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
TRPM1-211ENST00000560658 ATAD2Q6PL18 1390 aa22.77■■□□□ 1.24
TRPM1-211ENST00000560658 RARSP54136 660 aaKnown RBP22.77■■□□□ 1.24
TRPM1-211ENST00000560658 ABCC11Q96J66 1382 aa22.77■■□□□ 1.23
TRPM1-211ENST00000560658 SIGLEC1Q9BZZ2 1709 aa22.76■■□□□ 1.23
TRPM1-211ENST00000560658 MTHFSP49914 203 aa22.76■■□□□ 1.23
TRPM1-211ENST00000560658 VIRMAQ69YN4 1812 aaKnown RBP22.75■■□□□ 1.23
TRPM1-211ENST00000560658 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
TRPM1-211ENST00000560658 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
TRPM1-211ENST00000560658 DMRT2Q9Y5R5 561 aa22.74■■□□□ 1.23
TRPM1-211ENST00000560658 PNNQ9H307 717 aaKnown RBP22.73■■□□□ 1.23
TRPM1-211ENST00000560658 CLTCQ00610 1675 aaKnown RBP22.73■■□□□ 1.23
TRPM1-211ENST00000560658 IL16Q14005 1332 aa22.71■■□□□ 1.23
TRPM1-211ENST00000560658 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
TRPM1-211ENST00000560658 RGS3P49796 1198 aa22.7■■□□□ 1.22
TRPM1-211ENST00000560658 TERF2IPQ9NYB0 399 aa22.7■■□□□ 1.22
TRPM1-211ENST00000560658 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
TRPM1-211ENST00000560658 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
TRPM1-211ENST00000560658 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
TRPM1-211ENST00000560658 IGHDP01880 384 aa22.68■■□□□ 1.22
TRPM1-211ENST00000560658 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
TRPM1-211ENST00000560658 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
TRPM1-211ENST00000560658 COG6Q9Y2V7 657 aa22.67■■□□□ 1.22
TRPM1-211ENST00000560658 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
TRPM1-211ENST00000560658 PREX1Q8TCU6 1659 aa22.66■■□□□ 1.22
TRPM1-211ENST00000560658 PTPRMP28827 1452 aa22.65■■□□□ 1.22
TRPM1-211ENST00000560658 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
TRPM1-211ENST00000560658 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
TRPM1-211ENST00000560658 IDI1Q13907 227 aa22.65■■□□□ 1.22
TRPM1-211ENST00000560658 PANK1Q8TE04 598 aa22.65■■□□□ 1.22
TRPM1-211ENST00000560658 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
TRPM1-211ENST00000560658 COL3A1P02461 1466 aaPredicted RBP22.64■■□□□ 1.21
TRPM1-211ENST00000560658 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.21
TRPM1-211ENST00000560658 BECN1Q14457 450 aa22.64■■□□□ 1.21
TRPM1-211ENST00000560658 FRAT1Q92837 279 aaPredicted RBP22.64■■□□□ 1.21
TRPM1-211ENST00000560658 ZKSCAN2Q63HK3 967 aa22.63■■□□□ 1.21
TRPM1-211ENST00000560658 CFAP65Q6ZU64 1925 aaKnown RBP22.63■■□□□ 1.21
TRPM1-211ENST00000560658 KDM4FA0A1W2PPD8 638 aa22.62■■□□□ 1.21
TRPM1-211ENST00000560658 NEUROD2Q15784 382 aa22.62■■□□□ 1.21
TRPM1-211ENST00000560658 YTHDC2Q9H6S0 1430 aaKnown RBP22.62■■□□□ 1.21
TRPM1-211ENST00000560658 UPF2Q9HAU5 1272 aaKnown RBP22.61■■□□□ 1.21
TRPM1-211ENST00000560658 RRP7AQ9Y3A4 280 aaKnown RBP22.61■■□□□ 1.21
TRPM1-211ENST00000560658 DLC1Q96QB1 1528 aa22.61■■□□□ 1.21
TRPM1-211ENST00000560658 REREQ9P2R6 1566 aa22.61■■□□□ 1.21
TRPM1-211ENST00000560658 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
TRPM1-211ENST00000560658 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
TRPM1-211ENST00000560658 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
TRPM1-211ENST00000560658 CABP2Q9NPB3 220 aa22.6■■□□□ 1.21
TRPM1-211ENST00000560658 CDC42BPGQ6DT37 1551 aa22.6■■□□□ 1.21
TRPM1-211ENST00000560658 SRPK2P78362 688 aaKnown RBP22.6■■□□□ 1.21
TRPM1-211ENST00000560658 NFKBIBQ15653 356 aa22.6■■□□□ 1.21
TRPM1-211ENST00000560658 PLEKHF1Q96S99 279 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms