RNA–Protein interactions for RNA: ENST00000560622.5

USP3-AS1-207, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 508 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-207ENST00000560622 RGS12O14924 1447 aa24.38■■□□□ 1.49
USP3-AS1-207ENST00000560622 RXRBP28702 533 aa24.37■■□□□ 1.49
USP3-AS1-207ENST00000560622 PXDNQ92626 1479 aa24.36■■□□□ 1.49
USP3-AS1-207ENST00000560622 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
USP3-AS1-207ENST00000560622 RGPD8O14715 1765 aaPredicted RBP24.35■■□□□ 1.49
USP3-AS1-207ENST00000560622 C8orf37Q96NL8 207 aa24.34■■□□□ 1.49
USP3-AS1-207ENST00000560622 CCDC144AA2RUR9 1427 aa24.34■■□□□ 1.49
USP3-AS1-207ENST00000560622 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
USP3-AS1-207ENST00000560622 MYOM2P54296 1465 aa24.32■■□□□ 1.48
USP3-AS1-207ENST00000560622 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
USP3-AS1-207ENST00000560622 PLEKHH1Q9ULM0 1364 aa24.31■■□□□ 1.48
USP3-AS1-207ENST00000560622 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
USP3-AS1-207ENST00000560622 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
USP3-AS1-207ENST00000560622 NRXN1Q9ULB1 1477 aa24.29■■□□□ 1.48
USP3-AS1-207ENST00000560622 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
USP3-AS1-207ENST00000560622 QTRT2Q9H974 415 aaKnown RBP24.28■■□□□ 1.48
USP3-AS1-207ENST00000560622 ABCC11Q96J66 1382 aa24.28■■□□□ 1.48
USP3-AS1-207ENST00000560622 ADAMTS2O95450 1211 aa24.27■■□□□ 1.48
USP3-AS1-207ENST00000560622 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
USP3-AS1-207ENST00000560622 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
USP3-AS1-207ENST00000560622 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
USP3-AS1-207ENST00000560622 TMEM132EQ6IEE7 984 aa24.25■■□□□ 1.47
USP3-AS1-207ENST00000560622 ATRNO75882 1429 aa24.24■■□□□ 1.47
USP3-AS1-207ENST00000560622 YTHDC2Q9H6S0 1430 aaKnown RBP24.24■■□□□ 1.47
USP3-AS1-207ENST00000560622 KIF1AQ12756 1690 aa24.24■■□□□ 1.47
USP3-AS1-207ENST00000560622 FNBP4Q8N3X1 1017 aaPredicted RBP24.23■■□□□ 1.47
USP3-AS1-207ENST00000560622 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.23■■□□□ 1.47
USP3-AS1-207ENST00000560622 NGLY1Q96IV0 654 aa24.22■■□□□ 1.47
USP3-AS1-207ENST00000560622 STK26Q9P289 416 aa24.22■■□□□ 1.47
USP3-AS1-207ENST00000560622 BCL9LQ86UU0 1499 aa24.21■■□□□ 1.47
USP3-AS1-207ENST00000560622 NPHP3Q7Z494 1330 aa24.2■■□□□ 1.46
USP3-AS1-207ENST00000560622 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
USP3-AS1-207ENST00000560622 ABCA3Q99758 1704 aa24.19■■□□□ 1.46
USP3-AS1-207ENST00000560622 XPCQ01831 940 aaPredicted RBP24.19■■□□□ 1.46
USP3-AS1-207ENST00000560622 USP32Q8NFA0 1604 aa24.19■■□□□ 1.46
USP3-AS1-207ENST00000560622 FOXO3O43524 673 aa24.18■■□□□ 1.46
USP3-AS1-207ENST00000560622 NUTM2FA1L443 756 aa24.17■■□□□ 1.46
USP3-AS1-207ENST00000560622 USP21Q9UK80 565 aa24.17■■□□□ 1.46
USP3-AS1-207ENST00000560622 C14orf93Q9H972 538 aaKnown RBP24.16■■□□□ 1.46
USP3-AS1-207ENST00000560622 ADGRB1O14514 1584 aa24.15■■□□□ 1.46
USP3-AS1-207ENST00000560622 GLI3P10071 1580 aa24.14■■□□□ 1.45
USP3-AS1-207ENST00000560622 BRWD3Q6RI45 1802 aa24.14■■□□□ 1.45
USP3-AS1-207ENST00000560622 SIRT1Q96EB6 747 aa24.13■■□□□ 1.45
USP3-AS1-207ENST00000560622 TRPC5Q9UL62 973 aaPredicted RBP24.13■■□□□ 1.45
USP3-AS1-207ENST00000560622 DLC1Q96QB1 1528 aa24.12■■□□□ 1.45
USP3-AS1-207ENST00000560622 CFAP70Q5T0N1 1121 aa24.12■■□□□ 1.45
USP3-AS1-207ENST00000560622 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
USP3-AS1-207ENST00000560622 SLIT2O94813 1529 aa24.11■■□□□ 1.45
USP3-AS1-207ENST00000560622 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
USP3-AS1-207ENST00000560622 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
USP3-AS1-207ENST00000560622 PLCH1Q4KWH8 1693 aa24.1■■□□□ 1.45
USP3-AS1-207ENST00000560622 TRPM3Q9HCF6 1732 aaPredicted RBP24.1■■□□□ 1.45
USP3-AS1-207ENST00000560622 NWD2Q9ULI1 1742 aa24.06■■□□□ 1.44
USP3-AS1-207ENST00000560622 ATAD2Q6PL18 1390 aa24.05■■□□□ 1.44
USP3-AS1-207ENST00000560622 ALS2Q96Q42 1657 aa24.05■■□□□ 1.44
USP3-AS1-207ENST00000560622 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
USP3-AS1-207ENST00000560622 TNS3Q68CZ2 1445 aa24.04■■□□□ 1.44
USP3-AS1-207ENST00000560622 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
USP3-AS1-207ENST00000560622 RALGAPBQ86X10 1494 aa24.03■■□□□ 1.44
USP3-AS1-207ENST00000560622 KRT28Q7Z3Y7 464 aa24.03■■□□□ 1.44
USP3-AS1-207ENST00000560622 PRAM1Q96QH2 718 aa24.02■■□□□ 1.44
USP3-AS1-207ENST00000560622 NRAPQ86VF7 1730 aa24.01■■□□□ 1.43
USP3-AS1-207ENST00000560622 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
USP3-AS1-207ENST00000560622 PHF8Q9UPP1 1060 aa24.01■■□□□ 1.43
USP3-AS1-207ENST00000560622 ARHGEF28Q8N1W1 1705 aaKnown RBP24.01■■□□□ 1.43
USP3-AS1-207ENST00000560622 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
USP3-AS1-207ENST00000560622 SBNO1A3KN83 1393 aa23.99■■□□□ 1.43
USP3-AS1-207ENST00000560622 ANKARQ7Z5J8 1434 aa23.99■■□□□ 1.43
USP3-AS1-207ENST00000560622 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
USP3-AS1-207ENST00000560622 UNC5CLQ8IV45 518 aa23.97■■□□□ 1.43
USP3-AS1-207ENST00000560622 CABLES1Q8TDN4 633 aa23.97■■□□□ 1.43
USP3-AS1-207ENST00000560622 PRR36Q9H6K5 1346 aa23.95■■□□□ 1.42
USP3-AS1-207ENST00000560622 TULP4Q9NRJ4 1543 aa23.94■■□□□ 1.42
USP3-AS1-207ENST00000560622 PMFBP1Q8TBY8 1022 aa23.91■■□□□ 1.42
USP3-AS1-207ENST00000560622 TRAK1Q9UPV9 953 aa23.9■■□□□ 1.42
USP3-AS1-207ENST00000560622 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
USP3-AS1-207ENST00000560622 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.41
USP3-AS1-207ENST00000560622 ARHGEF10O15013 1369 aa23.89■■□□□ 1.41
USP3-AS1-207ENST00000560622 COL14A1Q05707 1796 aaKnown RBP23.88■■□□□ 1.41
USP3-AS1-207ENST00000560622 PSME1Q06323 249 aa23.88■■□□□ 1.41
USP3-AS1-207ENST00000560622 TOPAZ1Q8N9V7 1692 aa23.88■■□□□ 1.41
USP3-AS1-207ENST00000560622 VPS72Q15906 364 aa23.87■■□□□ 1.41
USP3-AS1-207ENST00000560622 POGKQ9P215 609 aa23.87■■□□□ 1.41
USP3-AS1-207ENST00000560622 MINK1Q8N4C8 1332 aaPredicted RBP23.86■■□□□ 1.41
USP3-AS1-207ENST00000560622 FAM83GA6ND36 823 aa23.86■■□□□ 1.41
USP3-AS1-207ENST00000560622 ONECUT3O60422 494 aaPredicted RBP23.86■■□□□ 1.41
USP3-AS1-207ENST00000560622 ATP7BP35670 1465 aa23.86■■□□□ 1.41
USP3-AS1-207ENST00000560622 KIAA1210Q9ULL0 1709 aa23.85■■□□□ 1.41
USP3-AS1-207ENST00000560622 DCAF11Q8TEB1 546 aa23.85■■□□□ 1.41
USP3-AS1-207ENST00000560622 PHRF1Q9P1Y6 1649 aaKnown RBP23.84■■□□□ 1.41
USP3-AS1-207ENST00000560622 KDM2AQ9Y2K7 1162 aa23.84■■□□□ 1.41
USP3-AS1-207ENST00000560622 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
USP3-AS1-207ENST00000560622 PLEKHG5O94827 1062 aa23.83■■□□□ 1.41
USP3-AS1-207ENST00000560622 CCDC125Q86Z20 511 aa23.83■■□□□ 1.41
USP3-AS1-207ENST00000560622 WASLO00401 505 aaPredicted RBP23.82■■□□□ 1.4
USP3-AS1-207ENST00000560622 HRCP23327 699 aa23.82■■□□□ 1.4
USP3-AS1-207ENST00000560622 SEPT12Q8IYM1 358 aa23.82■■□□□ 1.4
USP3-AS1-207ENST00000560622 THSD7AQ9UPZ6 1657 aa23.8■■□□□ 1.4
USP3-AS1-207ENST00000560622 LMOD2Q6P5Q4 547 aa23.8■■□□□ 1.4
USP3-AS1-207ENST00000560622 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms