RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
RABGGTA-217ENST00000560521 MYOM2P54296 1465 aa13.83□□□□□ -0.2
RABGGTA-217ENST00000560521 GLI3P10071 1580 aa13.83□□□□□ -0.2
RABGGTA-217ENST00000560521 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
RABGGTA-217ENST00000560521 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-217ENST00000560521 LRP5O75197 1615 aa13.82□□□□□ -0.2
RABGGTA-217ENST00000560521 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-217ENST00000560521 PPLO60437 1756 aa13.8□□□□□ -0.2
RABGGTA-217ENST00000560521 PXDNQ92626 1479 aa13.8□□□□□ -0.2
RABGGTA-217ENST00000560521 DEFB132Q7Z7B7 95 aa13.79□□□□□ -0.2
RABGGTA-217ENST00000560521 BLMP54132 1417 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-217ENST00000560521 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
RABGGTA-217ENST00000560521 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
RABGGTA-217ENST00000560521 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
RABGGTA-217ENST00000560521 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.21
RABGGTA-217ENST00000560521 SLIT2O94813 1529 aa13.76□□□□□ -0.21
RABGGTA-217ENST00000560521 XPCQ01831 940 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-217ENST00000560521 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
RABGGTA-217ENST00000560521 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
RABGGTA-217ENST00000560521 FOXO3O43524 673 aa13.75□□□□□ -0.21
RABGGTA-217ENST00000560521 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
RABGGTA-217ENST00000560521 PLCH1Q4KWH8 1693 aa13.75□□□□□ -0.21
RABGGTA-217ENST00000560521 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
RABGGTA-217ENST00000560521 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-217ENST00000560521 ITGAEP38570 1179 aa13.74□□□□□ -0.21
RABGGTA-217ENST00000560521 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
RABGGTA-217ENST00000560521 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
RABGGTA-217ENST00000560521 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
RABGGTA-217ENST00000560521 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-217ENST00000560521 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.21
RABGGTA-217ENST00000560521 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
RABGGTA-217ENST00000560521 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
RABGGTA-217ENST00000560521 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-217ENST00000560521 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 NAIPQ13075 1403 aa13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 IFT172Q9UG01 1749 aa13.69□□□□□ -0.22
RABGGTA-217ENST00000560521 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
RABGGTA-217ENST00000560521 RGPD1P0DJD0 1748 aa13.68□□□□□ -0.22
RABGGTA-217ENST00000560521 HRCP23327 699 aa13.68□□□□□ -0.22
RABGGTA-217ENST00000560521 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
RABGGTA-217ENST00000560521 VPS72Q15906 364 aa13.67□□□□□ -0.22
RABGGTA-217ENST00000560521 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
RABGGTA-217ENST00000560521 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
RABGGTA-217ENST00000560521 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
RABGGTA-217ENST00000560521 CABLES1Q8TDN4 633 aa13.65□□□□□ -0.22
RABGGTA-217ENST00000560521 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-217ENST00000560521 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
RABGGTA-217ENST00000560521 TECPR2O15040 1411 aa13.64□□□□□ -0.23
RABGGTA-217ENST00000560521 BAG6P46379 1132 aa13.63□□□□□ -0.23
RABGGTA-217ENST00000560521 STK26Q9P289 416 aa13.63□□□□□ -0.23
RABGGTA-217ENST00000560521 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
RABGGTA-217ENST00000560521 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-217ENST00000560521 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
RABGGTA-217ENST00000560521 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
RABGGTA-217ENST00000560521 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-217ENST00000560521 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-217ENST00000560521 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
RABGGTA-217ENST00000560521 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
RABGGTA-217ENST00000560521 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
RABGGTA-217ENST00000560521 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
RABGGTA-217ENST00000560521 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-217ENST00000560521 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
RABGGTA-217ENST00000560521 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 PSME1Q06323 249 aa13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 R3HDM1Q15032 1099 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 PPARGC1BQ86YN6 1023 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
RABGGTA-217ENST00000560521 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
RABGGTA-217ENST00000560521 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
RABGGTA-217ENST00000560521 A0A0G2JS52 829 aa13.57□□□□□ -0.24
RABGGTA-217ENST00000560521 MYT1Q01538 1121 aa13.57□□□□□ -0.24
RABGGTA-217ENST00000560521 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
RABGGTA-217ENST00000560521 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
RABGGTA-217ENST00000560521 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
RABGGTA-217ENST00000560521 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
RABGGTA-217ENST00000560521 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-217ENST00000560521 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
RABGGTA-217ENST00000560521 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-217ENST00000560521 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
RABGGTA-217ENST00000560521 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
RABGGTA-217ENST00000560521 RREB1Q92766 1687 aa13.54□□□□□ -0.24
RABGGTA-217ENST00000560521 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-217ENST00000560521 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
RABGGTA-217ENST00000560521 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
RABGGTA-217ENST00000560521 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
RABGGTA-217ENST00000560521 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
RABGGTA-217ENST00000560521 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
RABGGTA-217ENST00000560521 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
RABGGTA-217ENST00000560521 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
RABGGTA-217ENST00000560521 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
RABGGTA-217ENST00000560521 SPATA31A5Q5VU36 1347 aa13.51□□□□□ -0.25
RABGGTA-217ENST00000560521 SPATA31A7Q8IWB4 1347 aa13.51□□□□□ -0.25
RABGGTA-217ENST00000560521 CAMKK2Q96RR4 588 aa13.51□□□□□ -0.25
RABGGTA-217ENST00000560521 YY1P25490 414 aa13.5□□□□□ -0.25
RABGGTA-217ENST00000560521 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms