RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.09
HERC1-209ENST00000560519 MYOM2P54296 1465 aa14.51□□□□□ -0.09
HERC1-209ENST00000560519 PXDNQ92626 1479 aa14.51□□□□□ -0.09
HERC1-209ENST00000560519 NPHP3Q7Z494 1330 aa14.51□□□□□ -0.09
HERC1-209ENST00000560519 DDX17Q92841 729 aaKnown RBP14.51□□□□□ -0.09
HERC1-209ENST00000560519 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
HERC1-209ENST00000560519 TECPR2O15040 1411 aa14.5□□□□□ -0.09
HERC1-209ENST00000560519 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
HERC1-209ENST00000560519 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
HERC1-209ENST00000560519 FOXD1Q16676 465 aa14.5□□□□□ -0.09
HERC1-209ENST00000560519 USP21Q9UK80 565 aa14.49□□□□□ -0.09
HERC1-209ENST00000560519 TRPC5Q9UL62 973 aaPredicted RBP14.49□□□□□ -0.09
HERC1-209ENST00000560519 ATRNO75882 1429 aa14.49□□□□□ -0.09
HERC1-209ENST00000560519 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
HERC1-209ENST00000560519 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
HERC1-209ENST00000560519 ABCA3Q99758 1704 aa14.47□□□□□ -0.09
HERC1-209ENST00000560519 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
HERC1-209ENST00000560519 ORAI2Q96SN7 254 aa14.47□□□□□ -0.09
HERC1-209ENST00000560519 NWD2Q9ULI1 1742 aa14.46□□□□□ -0.09
HERC1-209ENST00000560519 ANKRD30BQ9BXX2 1392 aa14.46□□□□□ -0.1
HERC1-209ENST00000560519 PLCH1Q4KWH8 1693 aa14.46□□□□□ -0.1
HERC1-209ENST00000560519 PIK3C2GO75747 1445 aa14.45□□□□□ -0.1
HERC1-209ENST00000560519 FNBP4Q8N3X1 1017 aaPredicted RBP14.45□□□□□ -0.1
HERC1-209ENST00000560519 RGPD8O14715 1765 aaPredicted RBP14.44□□□□□ -0.1
HERC1-209ENST00000560519 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
HERC1-209ENST00000560519 ESCO1Q5FWF5 840 aa14.43□□□□□ -0.1
HERC1-209ENST00000560519 BCL9LQ86UU0 1499 aa14.42□□□□□ -0.1
HERC1-209ENST00000560519 GLI3P10071 1580 aa14.41□□□□□ -0.1
HERC1-209ENST00000560519 BRWD3Q6RI45 1802 aa14.41□□□□□ -0.1
HERC1-209ENST00000560519 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
HERC1-209ENST00000560519 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
HERC1-209ENST00000560519 CCDC125Q86Z20 511 aa14.4□□□□□ -0.1
HERC1-209ENST00000560519 YTHDC2Q9H6S0 1430 aaKnown RBP14.4□□□□□ -0.1
HERC1-209ENST00000560519 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
HERC1-209ENST00000560519 EP400Q96L91 3159 aa14.39□□□□□ -0.11
HERC1-209ENST00000560519 SLIT2O94813 1529 aa14.39□□□□□ -0.11
HERC1-209ENST00000560519 ADGRF5Q8IZF2 1346 aa14.39□□□□□ -0.11
HERC1-209ENST00000560519 TNS3Q68CZ2 1445 aa14.38□□□□□ -0.11
HERC1-209ENST00000560519 FOXO3O43524 673 aa14.37□□□□□ -0.11
HERC1-209ENST00000560519 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
HERC1-209ENST00000560519 RALGAPBQ86X10 1494 aa14.37□□□□□ -0.11
HERC1-209ENST00000560519 NRXN1Q9ULB1 1477 aa14.37□□□□□ -0.11
HERC1-209ENST00000560519 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
HERC1-209ENST00000560519 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
HERC1-209ENST00000560519 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
HERC1-209ENST00000560519 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
HERC1-209ENST00000560519 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
HERC1-209ENST00000560519 STK26Q9P289 416 aa14.35□□□□□ -0.11
HERC1-209ENST00000560519 SPATA31A3Q5VYP0 1347 aa14.35□□□□□ -0.11
HERC1-209ENST00000560519 TRPM3Q9HCF6 1732 aaPredicted RBP14.35□□□□□ -0.11
HERC1-209ENST00000560519 XPCQ01831 940 aaPredicted RBP14.34□□□□□ -0.11
HERC1-209ENST00000560519 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
HERC1-209ENST00000560519 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
HERC1-209ENST00000560519 LRP5O75197 1615 aa14.33□□□□□ -0.11
HERC1-209ENST00000560519 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.11
HERC1-209ENST00000560519 ALS2Q96Q42 1657 aa14.33□□□□□ -0.11
HERC1-209ENST00000560519 RGPD1P0DJD0 1748 aa14.33□□□□□ -0.12
HERC1-209ENST00000560519 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.12
HERC1-209ENST00000560519 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
HERC1-209ENST00000560519 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
HERC1-209ENST00000560519 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
HERC1-209ENST00000560519 UNC5CLQ8IV45 518 aa14.33□□□□□ -0.12
HERC1-209ENST00000560519 CRYBG1Q9Y4K1 1723 aa14.32□□□□□ -0.12
HERC1-209ENST00000560519 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
HERC1-209ENST00000560519 SIRT1Q96EB6 747 aa14.32□□□□□ -0.12
HERC1-209ENST00000560519 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
HERC1-209ENST00000560519 SBNO1A3KN83 1393 aa14.32□□□□□ -0.12
HERC1-209ENST00000560519 EIF3AQ14152 1382 aaKnown RBP14.32□□□□□ -0.12
HERC1-209ENST00000560519 DHX57Q6P158 1386 aaKnown RBP14.32□□□□□ -0.12
HERC1-209ENST00000560519 PSME1Q06323 249 aa14.31□□□□□ -0.12
HERC1-209ENST00000560519 SF3B2Q13435 895 aaKnown RBP14.29□□□□□ -0.12
HERC1-209ENST00000560519 TMEM132EQ6IEE7 984 aa14.29□□□□□ -0.12
HERC1-209ENST00000560519 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
HERC1-209ENST00000560519 PHF8Q9UPP1 1060 aa14.29□□□□□ -0.12
HERC1-209ENST00000560519 TULP4Q9NRJ4 1543 aa14.29□□□□□ -0.12
HERC1-209ENST00000560519 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
HERC1-209ENST00000560519 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
HERC1-209ENST00000560519 C14orf93Q9H972 538 aaKnown RBP14.27□□□□□ -0.13
HERC1-209ENST00000560519 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
HERC1-209ENST00000560519 VPS72Q15906 364 aa14.26□□□□□ -0.13
HERC1-209ENST00000560519 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
HERC1-209ENST00000560519 THSD7AQ9UPZ6 1657 aa14.24□□□□□ -0.13
HERC1-209ENST00000560519 PRAM1Q96QH2 718 aa14.24□□□□□ -0.13
HERC1-209ENST00000560519 CCDC9Q9Y3X0 531 aaKnown RBP14.24□□□□□ -0.13
HERC1-209ENST00000560519 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
HERC1-209ENST00000560519 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
HERC1-209ENST00000560519 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
HERC1-209ENST00000560519 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
HERC1-209ENST00000560519 POGKQ9P215 609 aa14.22□□□□□ -0.13
HERC1-209ENST00000560519 ATP7BP35670 1465 aa14.21□□□□□ -0.13
HERC1-209ENST00000560519 CFAP70Q5T0N1 1121 aa14.21□□□□□ -0.13
HERC1-209ENST00000560519 KRT27Q7Z3Y8 459 aa14.21□□□□□ -0.13
HERC1-209ENST00000560519 KIAA1210Q9ULL0 1709 aa14.21□□□□□ -0.14
HERC1-209ENST00000560519 A0A0G2JS52 829 aa14.2□□□□□ -0.14
HERC1-209ENST00000560519 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
HERC1-209ENST00000560519 MYT1Q01538 1121 aa14.2□□□□□ -0.14
HERC1-209ENST00000560519 BAG6P46379 1132 aa14.19□□□□□ -0.14
HERC1-209ENST00000560519 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 15
HERC1-209ENST00000560519 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
HERC1-209ENST00000560519 SRCAPQ6ZRS2 3230 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms