RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 PRAM1Q96QH2 718 aa8.51□□□□□ -1.05
AP4E1-203ENST00000560508 ADGRL1O94910 1474 aa8.5□□□□□ -1.05
AP4E1-203ENST00000560508 ATP6V1DQ9Y5K8 247 aa8.5□□□□□ -1.05
AP4E1-203ENST00000560508 H3BQV1 296 aa8.5□□□□□ -1.05
AP4E1-203ENST00000560508 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
AP4E1-203ENST00000560508 SLC52A1Q9NWF4 448 aa8.5□□□□□ -1.05
AP4E1-203ENST00000560508 IFIT2P09913 472 aaKnown RBP8.49□□□□□ -1.05
AP4E1-203ENST00000560508 HSP90AB4PQ58FF6 505 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 ATF3P18847 181 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 FKBP5Q13451 457 aaPredicted RBP8.49□□□□□ -1.05
AP4E1-203ENST00000560508 GPRASP1Q5JY77 1395 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 PANK1Q8TE04 598 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 ADGBQ8N7X0 1667 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 RTEL1-TNFRSF6BF6WH68 1400 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
AP4E1-203ENST00000560508 RPRD2Q5VT52 1461 aaKnown RBP8.49□□□□□ -1.05
AP4E1-203ENST00000560508 FAM184AQ8NB25 1140 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 G3V3G9 751 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 DUOX2Q9NRD8 1548 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 POGZQ7Z3K3 1410 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
AP4E1-203ENST00000560508 WDR63Q8IWG1 891 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 WDR62O43379 1518 aa8.48□□□□□ -1.05
AP4E1-203ENST00000560508 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
AP4E1-203ENST00000560508 FOXD4L4Q8WXT5 416 aaPredicted RBP8.48□□□□□ -1.05
AP4E1-203ENST00000560508 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
AP4E1-203ENST00000560508 G3BP1Q13283 466 aaKnown RBP eCLIP8.47□□□□□ -1.05
AP4E1-203ENST00000560508 ZNF692Q9BU19 519 aaPredicted RBP8.47□□□□□ -1.05
AP4E1-203ENST00000560508 ERC2O15083 957 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 SLC4A3P48751 1232 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 GSE1Q14687 1217 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 CCDC30Q5VVM6 783 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 CD109Q6YHK3 1445 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 NSD3Q9BZ95 1437 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 CHMP5Q9NZZ3 219 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 FRAT2O75474 233 aaPredicted RBP8.47□□□□□ -1.05
AP4E1-203ENST00000560508 GTF2E1P29083 439 aaPredicted RBP8.47□□□□□ -1.05
AP4E1-203ENST00000560508 PDE3AQ14432 1141 aa8.47□□□□□ -1.05
AP4E1-203ENST00000560508 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.05
AP4E1-203ENST00000560508 CDC45O75419 566 aa8.46□□□□□ -1.05
AP4E1-203ENST00000560508 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.05
AP4E1-203ENST00000560508 SF3A1Q15459 793 aaKnown RBP8.46□□□□□ -1.05
AP4E1-203ENST00000560508 RNF20Q5VTR2 975 aa8.46□□□□□ -1.05
AP4E1-203ENST00000560508 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.05
AP4E1-203ENST00000560508 CDCA7LQ96GN5 454 aa8.46□□□□□ -1.05
AP4E1-203ENST00000560508 NCOA1Q15788 1441 aa8.46□□□□□ -1.06
AP4E1-203ENST00000560508 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
AP4E1-203ENST00000560508 C22orf23Q9BZE7 217 aa8.46□□□□□ -1.06
AP4E1-203ENST00000560508 DDX49Q9Y6V7 483 aaKnown RBP8.46□□□□□ -1.06
AP4E1-203ENST00000560508 CLSTN1O94985 981 aa8.46□□□□□ -1.06
AP4E1-203ENST00000560508 TOMM22Q9NS69 142 aa8.46□□□□□ -1.06
AP4E1-203ENST00000560508 TCOF1Q13428 1488 aaKnown RBP8.45□□□□□ -1.06
AP4E1-203ENST00000560508 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 SYNE3Q6ZMZ3 975 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 MAPKBP1O60336 1514 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 FANCAO15360 1455 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 UBTFL1P0CB47 393 aaPredicted RBP8.45□□□□□ -1.06
AP4E1-203ENST00000560508 EIF4G3O43432 1585 aaKnown RBP8.45□□□□□ -1.06
AP4E1-203ENST00000560508 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 ABTB2Q8N961 1025 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 LNPKQ9C0E8 428 aa8.45□□□□□ -1.06
AP4E1-203ENST00000560508 GPATCH8Q9UKJ3 1502 aaKnown RBP8.45□□□□□ -1.06
AP4E1-203ENST00000560508 NLRP6P59044 892 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 NOB1Q9ULX3 412 aaKnown RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 GCC1Q96CN9 775 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 DNMT1P26358 1616 aaKnown RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 AKAP17AQ02040 695 aaKnown RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 PLEKHO1Q53GL0 409 aaPredicted RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 RASSF8Q8NHQ8 419 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 NUCB2P80303 420 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 AMOTL1Q8IY63 956 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 THEMISQ8N1K5 641 aaPredicted RBP8.44□□□□□ -1.06
AP4E1-203ENST00000560508 SLC12A5Q9H2X9 1139 aa8.44□□□□□ -1.06
AP4E1-203ENST00000560508 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 NOL10Q9BSC4 688 aaKnown RBP8.43□□□□□ -1.06
AP4E1-203ENST00000560508 GNAI3P08754 354 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 TWISTNBQ3B726 338 aaPredicted RBP8.43□□□□□ -1.06
AP4E1-203ENST00000560508 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 TRIM29Q14134 588 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 RALGAPBQ86X10 1494 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 SYCP2Q9BX26 1530 aa8.43□□□□□ -1.06
AP4E1-203ENST00000560508 GCC2Q8IWJ2 1684 aa8.42□□□□□ -1.06
AP4E1-203ENST00000560508 GOLGA6L19H0YKK7 550 aa8.42□□□□□ -1.06
AP4E1-203ENST00000560508 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
AP4E1-203ENST00000560508 CPLX2Q6PUV4 134 aaKnown RBP8.42□□□□□ -1.06
AP4E1-203ENST00000560508 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 RAPGEF3O95398 923 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 CCT4P50991 539 aaKnown RBP8.41□□□□□ -1.06
AP4E1-203ENST00000560508 SMC3Q9UQE7 1217 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 ERC1Q8IUD2 1116 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms