RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 DCCP43146 1447 aa22.18■■□□□ 1.14
LYSMD2-204ENST00000560491 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
LYSMD2-204ENST00000560491 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
LYSMD2-204ENST00000560491 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
LYSMD2-204ENST00000560491 ATF3P18847 181 aa22.17■■□□□ 1.14
LYSMD2-204ENST00000560491 ILDR1Q86SU0 546 aaPredicted RBP22.17■■□□□ 1.14
LYSMD2-204ENST00000560491 TIMELESSQ9UNS1 1208 aa22.17■■□□□ 1.14
LYSMD2-204ENST00000560491 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
LYSMD2-204ENST00000560491 POGKQ9P215 609 aa22.16■■□□□ 1.14
LYSMD2-204ENST00000560491 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
LYSMD2-204ENST00000560491 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.14
LYSMD2-204ENST00000560491 GPRASP1Q5JY77 1395 aa22.13■■□□□ 1.13
LYSMD2-204ENST00000560491 MST1RQ04912 1400 aa22.13■■□□□ 1.13
LYSMD2-204ENST00000560491 QRICH2Q9H0J4 1663 aa22.12■■□□□ 1.13
LYSMD2-204ENST00000560491 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
LYSMD2-204ENST00000560491 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
LYSMD2-204ENST00000560491 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
LYSMD2-204ENST00000560491 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
LYSMD2-204ENST00000560491 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
LYSMD2-204ENST00000560491 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
LYSMD2-204ENST00000560491 C1orf167Q5SNV9 1468 aa22.06■■□□□ 1.12
LYSMD2-204ENST00000560491 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
LYSMD2-204ENST00000560491 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
LYSMD2-204ENST00000560491 NUTM2FA1L443 756 aa22.05■■□□□ 1.12
LYSMD2-204ENST00000560491 EIF3AQ14152 1382 aaKnown RBP22.04■■□□□ 1.12
LYSMD2-204ENST00000560491 USP32Q8NFA0 1604 aa22.04■■□□□ 1.12
LYSMD2-204ENST00000560491 BRINP3Q76B58 766 aa22.02■■□□□ 1.12
LYSMD2-204ENST00000560491 HSPA1LP34931 641 aa22.01■■□□□ 1.11
LYSMD2-204ENST00000560491 PHLPP1O60346 1717 aa22■■□□□ 1.11
LYSMD2-204ENST00000560491 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
LYSMD2-204ENST00000560491 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
LYSMD2-204ENST00000560491 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
LYSMD2-204ENST00000560491 TULP4Q9NRJ4 1543 aa21.99■■□□□ 1.11
LYSMD2-204ENST00000560491 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
LYSMD2-204ENST00000560491 ESCO1Q5FWF5 840 aa21.96■■□□□ 1.11
LYSMD2-204ENST00000560491 USP47Q96K76 1375 aa21.96■■□□□ 1.11
LYSMD2-204ENST00000560491 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
LYSMD2-204ENST00000560491 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
LYSMD2-204ENST00000560491 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
LYSMD2-204ENST00000560491 PRR36Q9H6K5 1346 aa21.95■■□□□ 1.1
LYSMD2-204ENST00000560491 ATP7BP35670 1465 aa21.95■■□□□ 1.1
LYSMD2-204ENST00000560491 KIF1AQ12756 1690 aa21.95■■□□□ 1.1
LYSMD2-204ENST00000560491 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
LYSMD2-204ENST00000560491 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
LYSMD2-204ENST00000560491 TOPAZ1Q8N9V7 1692 aa21.93■■□□□ 1.1
LYSMD2-204ENST00000560491 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
LYSMD2-204ENST00000560491 ST20-MTHFSA0A0A6YYL1 179 aa21.91■■□□□ 1.1
LYSMD2-204ENST00000560491 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
LYSMD2-204ENST00000560491 NUDT16Q96DE0 195 aaKnown RBP21.89■■□□□ 1.09
LYSMD2-204ENST00000560491 CABP2Q9NPB3 220 aa21.89■■□□□ 1.09
LYSMD2-204ENST00000560491 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
LYSMD2-204ENST00000560491 PHF8Q9UPP1 1060 aa21.88■■□□□ 1.09
LYSMD2-204ENST00000560491 PMFBP1Q8TBY8 1022 aa21.87■■□□□ 1.09
LYSMD2-204ENST00000560491 TESK2Q96S53 571 aa21.87■■□□□ 1.09
LYSMD2-204ENST00000560491 PXDNQ92626 1479 aa21.86■■□□□ 1.09
LYSMD2-204ENST00000560491 FOXO3O43524 673 aa21.86■■□□□ 1.09
LYSMD2-204ENST00000560491 XPCQ01831 940 aaPredicted RBP21.85■■□□□ 1.09
LYSMD2-204ENST00000560491 NPHP3Q7Z494 1330 aa21.84■■□□□ 1.09
LYSMD2-204ENST00000560491 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
LYSMD2-204ENST00000560491 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
LYSMD2-204ENST00000560491 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
LYSMD2-204ENST00000560491 CCDC61Q9Y6R9 512 aa21.81■■□□□ 1.08
LYSMD2-204ENST00000560491 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
LYSMD2-204ENST00000560491 HSPA5P11021 654 aaKnown RBP21.79■■□□□ 1.08
LYSMD2-204ENST00000560491 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
LYSMD2-204ENST00000560491 TRPM3Q9HCF6 1732 aaPredicted RBP21.79■■□□□ 1.08
LYSMD2-204ENST00000560491 JCADQ9P266 1359 aa21.78■■□□□ 1.08
LYSMD2-204ENST00000560491 KRT28Q7Z3Y7 464 aa21.78■■□□□ 1.08
LYSMD2-204ENST00000560491 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
LYSMD2-204ENST00000560491 ATAD2Q6PL18 1390 aa21.77■■□□□ 1.08
LYSMD2-204ENST00000560491 ACEP12821 1306 aa21.77■■□□□ 1.07
LYSMD2-204ENST00000560491 PLEKHG3A1L390 1219 aa21.76■■□□□ 1.07
LYSMD2-204ENST00000560491 PSME1Q06323 249 aa21.76■■□□□ 1.07
LYSMD2-204ENST00000560491 LRRC59Q96AG4 307 aaKnown RBP21.76■■□□□ 1.07
LYSMD2-204ENST00000560491 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
LYSMD2-204ENST00000560491 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
LYSMD2-204ENST00000560491 AKAP12Q02952 1782 aa21.75■■□□□ 1.07
LYSMD2-204ENST00000560491 TMF1P82094 1093 aa21.75■■□□□ 1.07
LYSMD2-204ENST00000560491 PNPLA6Q8IY17 1366 aa21.74■■□□□ 1.07
LYSMD2-204ENST00000560491 ALS2Q96Q42 1657 aa21.72■■□□□ 1.07
LYSMD2-204ENST00000560491 TNS3Q68CZ2 1445 aa21.72■■□□□ 1.07
LYSMD2-204ENST00000560491 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
LYSMD2-204ENST00000560491 MED1Q15648 1581 aaPredicted RBP21.72■■□□□ 1.07
LYSMD2-204ENST00000560491 COL22A1Q8NFW1 1626 aaPredicted RBP21.72■■□□□ 1.07
LYSMD2-204ENST00000560491 SPATA31A3Q5VYP0 1347 aa21.71■■□□□ 1.07
LYSMD2-204ENST00000560491 SBNO1A3KN83 1393 aa21.71■■□□□ 1.07
LYSMD2-204ENST00000560491 TMC1Q8TDI8 760 aa21.7■■□□□ 1.06
LYSMD2-204ENST00000560491 LRP6O75581 1613 aa21.69■■□□□ 1.06
LYSMD2-204ENST00000560491 MYOM1P52179 1685 aa21.69■■□□□ 1.06
LYSMD2-204ENST00000560491 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
LYSMD2-204ENST00000560491 PUS7Q96PZ0 661 aaKnown RBP21.69■■□□□ 1.06
LYSMD2-204ENST00000560491 CD163L1Q9NR16 1453 aa21.69■■□□□ 1.06
LYSMD2-204ENST00000560491 SLC12A5Q9H2X9 1139 aa21.68■■□□□ 1.06
LYSMD2-204ENST00000560491 NRKQ7Z2Y5 1582 aa21.68■■□□□ 1.06
LYSMD2-204ENST00000560491 USP6P35125 1406 aa21.67■■□□□ 1.06
LYSMD2-204ENST00000560491 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
LYSMD2-204ENST00000560491 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
LYSMD2-204ENST00000560491 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
LYSMD2-204ENST00000560491 ABCA3Q99758 1704 aa21.66■■□□□ 1.06
LYSMD2-204ENST00000560491 CPSF1Q10570 1443 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms