RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
TPM1-223ENST00000560445 STK26Q9P289 416 aa20.63■□□□□ 0.89
TPM1-223ENST00000560445 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
TPM1-223ENST00000560445 LRP6O75581 1613 aa20.6■□□□□ 0.89
TPM1-223ENST00000560445 NPHP3Q7Z494 1330 aa20.6■□□□□ 0.89
TPM1-223ENST00000560445 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
TPM1-223ENST00000560445 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
TPM1-223ENST00000560445 TMEM132EQ6IEE7 984 aa20.57■□□□□ 0.88
TPM1-223ENST00000560445 POTEAQ6S8J7 498 aa20.57■□□□□ 0.88
TPM1-223ENST00000560445 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
TPM1-223ENST00000560445 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
TPM1-223ENST00000560445 SOS2Q07890 1332 aaPredicted RBP20.56■□□□□ 0.88
TPM1-223ENST00000560445 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
TPM1-223ENST00000560445 KIF1AQ12756 1690 aa20.55■□□□□ 0.88
TPM1-223ENST00000560445 ORAI2Q96SN7 254 aa20.55■□□□□ 0.88
TPM1-223ENST00000560445 DLC1Q96QB1 1528 aa20.54■□□□□ 0.88
TPM1-223ENST00000560445 WAPLQ7Z5K2 1190 aa20.54■□□□□ 0.88
TPM1-223ENST00000560445 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
TPM1-223ENST00000560445 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
TPM1-223ENST00000560445 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
TPM1-223ENST00000560445 POGKQ9P215 609 aa20.51■□□□□ 0.87
TPM1-223ENST00000560445 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
TPM1-223ENST00000560445 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
TPM1-223ENST00000560445 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
TPM1-223ENST00000560445 AFF2P51816 1311 aa20.49■□□□□ 0.87
TPM1-223ENST00000560445 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
TPM1-223ENST00000560445 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
TPM1-223ENST00000560445 RXRBP28702 533 aa20.48■□□□□ 0.87
TPM1-223ENST00000560445 PRAM1Q96QH2 718 aa20.48■□□□□ 0.87
TPM1-223ENST00000560445 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
TPM1-223ENST00000560445 PXDNQ92626 1479 aa20.47■□□□□ 0.87
TPM1-223ENST00000560445 ADGRB1O14514 1584 aa20.46■□□□□ 0.87
TPM1-223ENST00000560445 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
TPM1-223ENST00000560445 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
TPM1-223ENST00000560445 KDM2AQ9Y2K7 1162 aa20.46■□□□□ 0.87
TPM1-223ENST00000560445 FOXO3O43524 673 aa20.45■□□□□ 0.86
TPM1-223ENST00000560445 PSME1Q06323 249 aa20.45■□□□□ 0.86
TPM1-223ENST00000560445 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
TPM1-223ENST00000560445 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
TPM1-223ENST00000560445 ADAMTS2O95450 1211 aa20.43■□□□□ 0.86
TPM1-223ENST00000560445 PHF8Q9UPP1 1060 aa20.42■□□□□ 0.86
TPM1-223ENST00000560445 RBM6P78332 1123 aaKnown RBP20.41■□□□□ 0.86
TPM1-223ENST00000560445 KIAA1210Q9ULL0 1709 aa20.41■□□□□ 0.86
TPM1-223ENST00000560445 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
TPM1-223ENST00000560445 TRAK1Q9UPV9 953 aa20.4■□□□□ 0.86
TPM1-223ENST00000560445 ARHGEF10O15013 1369 aa20.38■□□□□ 0.85
TPM1-223ENST00000560445 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
TPM1-223ENST00000560445 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
TPM1-223ENST00000560445 QTRT2Q9H974 415 aaKnown RBP20.38■□□□□ 0.85
TPM1-223ENST00000560445 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
TPM1-223ENST00000560445 SBNO1A3KN83 1393 aa20.37■□□□□ 0.85
TPM1-223ENST00000560445 MARF1Q9Y4F3 1742 aaKnown RBP20.37■□□□□ 0.85
TPM1-223ENST00000560445 USP21Q9UK80 565 aa20.37■□□□□ 0.85
TPM1-223ENST00000560445 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
TPM1-223ENST00000560445 HAP1P54257 671 aaPredicted RBP20.36■□□□□ 0.85
TPM1-223ENST00000560445 XPCQ01831 940 aaPredicted RBP20.36■□□□□ 0.85
TPM1-223ENST00000560445 FNBP4Q8N3X1 1017 aaPredicted RBP20.36■□□□□ 0.85
TPM1-223ENST00000560445 TULP4Q9NRJ4 1543 aa20.36■□□□□ 0.85
TPM1-223ENST00000560445 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
TPM1-223ENST00000560445 RGPD8O14715 1765 aaPredicted RBP20.35■□□□□ 0.85
TPM1-223ENST00000560445 ARHGEF28Q8N1W1 1705 aaKnown RBP20.34■□□□□ 0.85
TPM1-223ENST00000560445 ITSN1Q15811 1721 aa20.33■□□□□ 0.85
TPM1-223ENST00000560445 MINK1Q8N4C8 1332 aaPredicted RBP20.33■□□□□ 0.85
TPM1-223ENST00000560445 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
TPM1-223ENST00000560445 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
TPM1-223ENST00000560445 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
TPM1-223ENST00000560445 ATRNO75882 1429 aa20.29■□□□□ 0.84
TPM1-223ENST00000560445 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.29■□□□□ 0.84
TPM1-223ENST00000560445 RGS12O14924 1447 aa20.28■□□□□ 0.84
TPM1-223ENST00000560445 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
TPM1-223ENST00000560445 NGDNQ8NEJ9 315 aaKnown RBP20.27■□□□□ 0.84
TPM1-223ENST00000560445 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
TPM1-223ENST00000560445 PMFBP1Q8TBY8 1022 aa20.26■□□□□ 0.83
TPM1-223ENST00000560445 UPF1Q92900 1129 aaKnown RBP eCLIP20.24■□□□□ 0.83
TPM1-223ENST00000560445 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
TPM1-223ENST00000560445 SLIT2O94813 1529 aa20.23■□□□□ 0.83
TPM1-223ENST00000560445 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
TPM1-223ENST00000560445 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
TPM1-223ENST00000560445 ATP7BP35670 1465 aa20.23■□□□□ 0.83
TPM1-223ENST00000560445 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
TPM1-223ENST00000560445 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
TPM1-223ENST00000560445 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
TPM1-223ENST00000560445 PRR36Q9H6K5 1346 aa20.22■□□□□ 0.83
TPM1-223ENST00000560445 GJD4Q96KN9 370 aaPredicted RBP20.21■□□□□ 0.83
TPM1-223ENST00000560445 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
TPM1-223ENST00000560445 ALS2Q96Q42 1657 aa20.2■□□□□ 0.82
TPM1-223ENST00000560445 CCDC61Q9Y6R9 512 aa20.2■□□□□ 0.82
TPM1-223ENST00000560445 CDK19Q9BWU1 502 aa20.19■□□□□ 0.82
TPM1-223ENST00000560445 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
TPM1-223ENST00000560445 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
TPM1-223ENST00000560445 PLCH1Q4KWH8 1693 aa20.18■□□□□ 0.82
TPM1-223ENST00000560445 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
TPM1-223ENST00000560445 SRPK2P78362 688 aaKnown RBP20.16■□□□□ 0.82
TPM1-223ENST00000560445 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
TPM1-223ENST00000560445 VPS72Q15906 364 aa20.15■□□□□ 0.82
TPM1-223ENST00000560445 NBPF1Q3BBV0 1214 aa20.15■□□□□ 0.82
TPM1-223ENST00000560445 CABLES1Q8TDN4 633 aa20.15■□□□□ 0.82
TPM1-223ENST00000560445 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
TPM1-223ENST00000560445 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
TPM1-223ENST00000560445 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms