RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 AFF2P51816 1311 aa20.15■□□□□ 0.82
SMAD3-214ENST00000560402 MYOM2P54296 1465 aa20.15■□□□□ 0.82
SMAD3-214ENST00000560402 FMN2Q9NZ56 1722 aa20.14■□□□□ 0.81
SMAD3-214ENST00000560402 KIF1AQ12756 1690 aa20.14■□□□□ 0.81
SMAD3-214ENST00000560402 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
SMAD3-214ENST00000560402 DDX17Q92841 729 aaKnown RBP20.14■□□□□ 0.81
SMAD3-214ENST00000560402 RXRBP28702 533 aa20.13■□□□□ 0.81
SMAD3-214ENST00000560402 NRXN1Q9ULB1 1477 aa20.12■□□□□ 0.81
SMAD3-214ENST00000560402 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
SMAD3-214ENST00000560402 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
SMAD3-214ENST00000560402 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
SMAD3-214ENST00000560402 NPHP3Q7Z494 1330 aa20.11■□□□□ 0.81
SMAD3-214ENST00000560402 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
SMAD3-214ENST00000560402 PXDNQ92626 1479 aa20.1■□□□□ 0.81
SMAD3-214ENST00000560402 C8orf37Q96NL8 207 aa20.09■□□□□ 0.81
SMAD3-214ENST00000560402 RGS12O14924 1447 aa20.07■□□□□ 0.8
SMAD3-214ENST00000560402 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
SMAD3-214ENST00000560402 RBM6P78332 1123 aaKnown RBP20.05■□□□□ 0.8
SMAD3-214ENST00000560402 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
SMAD3-214ENST00000560402 STK26Q9P289 416 aa20.05■□□□□ 0.8
SMAD3-214ENST00000560402 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
SMAD3-214ENST00000560402 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
SMAD3-214ENST00000560402 WAPLQ7Z5K2 1190 aa20.03■□□□□ 0.8
SMAD3-214ENST00000560402 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.87e-10■■■■□ 19.8
SMAD3-214ENST00000560402 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
SMAD3-214ENST00000560402 PLEKHH1Q9ULM0 1364 aa20.03■□□□□ 0.8
SMAD3-214ENST00000560402 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.02■□□□□ 0.8
SMAD3-214ENST00000560402 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
SMAD3-214ENST00000560402 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.8
SMAD3-214ENST00000560402 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
SMAD3-214ENST00000560402 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
SMAD3-214ENST00000560402 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
SMAD3-214ENST00000560402 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
SMAD3-214ENST00000560402 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
SMAD3-214ENST00000560402 ATRNO75882 1429 aa19.99■□□□□ 0.79
SMAD3-214ENST00000560402 FOXO3O43524 673 aa19.98■□□□□ 0.79
SMAD3-214ENST00000560402 FNBP4Q8N3X1 1017 aaPredicted RBP19.98■□□□□ 0.79
SMAD3-214ENST00000560402 USP21Q9UK80 565 aa19.98■□□□□ 0.79
SMAD3-214ENST00000560402 TRPC5Q9UL62 973 aaPredicted RBP19.98■□□□□ 0.79
SMAD3-214ENST00000560402 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
SMAD3-214ENST00000560402 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
SMAD3-214ENST00000560402 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
SMAD3-214ENST00000560402 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
SMAD3-214ENST00000560402 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
SMAD3-214ENST00000560402 TNS3Q68CZ2 1445 aa19.94■□□□□ 0.78
SMAD3-214ENST00000560402 ABCA3Q99758 1704 aa19.94■□□□□ 0.78
SMAD3-214ENST00000560402 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
SMAD3-214ENST00000560402 ATAD2Q6PL18 1390 aa19.94■□□□□ 0.78
SMAD3-214ENST00000560402 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
SMAD3-214ENST00000560402 HRCP23327 699 aa19.92■□□□□ 0.78
SMAD3-214ENST00000560402 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
SMAD3-214ENST00000560402 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
SMAD3-214ENST00000560402 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
SMAD3-214ENST00000560402 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
SMAD3-214ENST00000560402 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
SMAD3-214ENST00000560402 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
SMAD3-214ENST00000560402 SBNO1A3KN83 1393 aa19.9■□□□□ 0.78
SMAD3-214ENST00000560402 SLIT2O94813 1529 aa19.9■□□□□ 0.78
SMAD3-214ENST00000560402 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.77
SMAD3-214ENST00000560402 PLCH1Q4KWH8 1693 aa19.89■□□□□ 0.77
SMAD3-214ENST00000560402 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
SMAD3-214ENST00000560402 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 PSME1Q06323 249 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 POGKQ9P215 609 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 ITSN1Q15811 1721 aa19.88■□□□□ 0.77
SMAD3-214ENST00000560402 TRPM3Q9HCF6 1732 aaPredicted RBP19.88■□□□□ 0.77
SMAD3-214ENST00000560402 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
SMAD3-214ENST00000560402 GLI3P10071 1580 aa19.85■□□□□ 0.77
SMAD3-214ENST00000560402 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
SMAD3-214ENST00000560402 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMAD3-214ENST00000560402 RALGAPBQ86X10 1494 aa19.82■□□□□ 0.76
SMAD3-214ENST00000560402 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
SMAD3-214ENST00000560402 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
SMAD3-214ENST00000560402 GJD4Q96KN9 370 aaPredicted RBP19.82■□□□□ 0.76
SMAD3-214ENST00000560402 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SMAD3-214ENST00000560402 EP400Q96L91 3159 aa19.81■□□□□ 0.76
SMAD3-214ENST00000560402 HAP1P54257 671 aaPredicted RBP19.81■□□□□ 0.76
SMAD3-214ENST00000560402 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
SMAD3-214ENST00000560402 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
SMAD3-214ENST00000560402 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
SMAD3-214ENST00000560402 NRAPQ86VF7 1730 aa19.79■□□□□ 0.76
SMAD3-214ENST00000560402 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
SMAD3-214ENST00000560402 BRWD3Q6RI45 1802 aa19.78■□□□□ 0.76
SMAD3-214ENST00000560402 COL14A1Q05707 1796 aaKnown RBP19.78■□□□□ 0.76
SMAD3-214ENST00000560402 ATP7BP35670 1465 aa19.77■□□□□ 0.76
SMAD3-214ENST00000560402 TOPAZ1Q8N9V7 1692 aa19.77■□□□□ 0.76
SMAD3-214ENST00000560402 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
SMAD3-214ENST00000560402 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
SMAD3-214ENST00000560402 CCDC125Q86Z20 511 aa19.76■□□□□ 0.75
SMAD3-214ENST00000560402 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
SMAD3-214ENST00000560402 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
SMAD3-214ENST00000560402 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
SMAD3-214ENST00000560402 VPS72Q15906 364 aa19.74■□□□□ 0.75
SMAD3-214ENST00000560402 LMOD2Q6P5Q4 547 aa19.74■□□□□ 0.75
SMAD3-214ENST00000560402 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
SMAD3-214ENST00000560402 PHRF1Q9P1Y6 1649 aaKnown RBP19.72■□□□□ 0.75
SMAD3-214ENST00000560402 BLMP54132 1417 aaPredicted RBP19.7■□□□□ 0.74
SMAD3-214ENST00000560402 NGDNQ8NEJ9 315 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms