RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 ATF3P18847 181 aa13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 SAFB2Q14151 953 aaKnown RBP eCLIP13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
TUBBP8-201ENST00000560273 STRCP1A6NGW2 1772 aa13.38□□□□□ -0.27
TUBBP8-201ENST00000560273 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
TUBBP8-201ENST00000560273 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
TUBBP8-201ENST00000560273 LAMC1P11047 1609 aa13.38□□□□□ -0.27
TUBBP8-201ENST00000560273 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
TUBBP8-201ENST00000560273 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
TUBBP8-201ENST00000560273 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
TUBBP8-201ENST00000560273 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
TUBBP8-201ENST00000560273 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
TUBBP8-201ENST00000560273 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
TUBBP8-201ENST00000560273 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
TUBBP8-201ENST00000560273 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
TUBBP8-201ENST00000560273 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
TUBBP8-201ENST00000560273 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
TUBBP8-201ENST00000560273 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
TUBBP8-201ENST00000560273 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
TUBBP8-201ENST00000560273 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
TUBBP8-201ENST00000560273 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
TUBBP8-201ENST00000560273 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
TUBBP8-201ENST00000560273 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
TUBBP8-201ENST00000560273 DCCP43146 1447 aa13.3□□□□□ -0.28
TUBBP8-201ENST00000560273 TRPM1Q7Z4N2 1603 aa13.29□□□□□ -0.28
TUBBP8-201ENST00000560273 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
TUBBP8-201ENST00000560273 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
TUBBP8-201ENST00000560273 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
TUBBP8-201ENST00000560273 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
TUBBP8-201ENST00000560273 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
TUBBP8-201ENST00000560273 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
TUBBP8-201ENST00000560273 MST1RQ04912 1400 aa13.26□□□□□ -0.29
TUBBP8-201ENST00000560273 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
TUBBP8-201ENST00000560273 USP47Q96K76 1375 aa13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 EVC2Q86UK5 1308 aa13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
TUBBP8-201ENST00000560273 C1orf167Q5SNV9 1468 aa13.24□□□□□ -0.29
TUBBP8-201ENST00000560273 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBBP8-201ENST00000560273 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
TUBBP8-201ENST00000560273 MED1Q15648 1581 aaPredicted RBP13.24□□□□□ -0.29
TUBBP8-201ENST00000560273 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
TUBBP8-201ENST00000560273 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
TUBBP8-201ENST00000560273 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
TUBBP8-201ENST00000560273 HSPA1LP34931 641 aa13.22□□□□□ -0.29
TUBBP8-201ENST00000560273 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
TUBBP8-201ENST00000560273 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
TUBBP8-201ENST00000560273 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
TUBBP8-201ENST00000560273 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
TUBBP8-201ENST00000560273 TESK2Q96S53 571 aa13.21□□□□□ -0.29
TUBBP8-201ENST00000560273 ARHGEF28Q8N1W1 1705 aaKnown RBP13.21□□□□□ -0.3
TUBBP8-201ENST00000560273 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
TUBBP8-201ENST00000560273 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 FOXO3O43524 673 aa13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 TMF1P82094 1093 aa13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
TUBBP8-201ENST00000560273 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
TUBBP8-201ENST00000560273 PSME1Q06323 249 aa13.18□□□□□ -0.3
TUBBP8-201ENST00000560273 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
TUBBP8-201ENST00000560273 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
TUBBP8-201ENST00000560273 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
TUBBP8-201ENST00000560273 CDCA8Q53HL2 280 aa13.17□□□□□ -0.3
TUBBP8-201ENST00000560273 PUS7Q96PZ0 661 aaKnown RBP13.17□□□□□ -0.3
TUBBP8-201ENST00000560273 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
TUBBP8-201ENST00000560273 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
TUBBP8-201ENST00000560273 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
TUBBP8-201ENST00000560273 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
TUBBP8-201ENST00000560273 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
TUBBP8-201ENST00000560273 TMC1Q8TDI8 760 aa13.15□□□□□ -0.3
TUBBP8-201ENST00000560273 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
TUBBP8-201ENST00000560273 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
TUBBP8-201ENST00000560273 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.31
TUBBP8-201ENST00000560273 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
TUBBP8-201ENST00000560273 ACEP12821 1306 aa13.13□□□□□ -0.31
TUBBP8-201ENST00000560273 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
TUBBP8-201ENST00000560273 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
TUBBP8-201ENST00000560273 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
TUBBP8-201ENST00000560273 ATP7BP35670 1465 aa13.13□□□□□ -0.31
TUBBP8-201ENST00000560273 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
TUBBP8-201ENST00000560273 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
TUBBP8-201ENST00000560273 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
TUBBP8-201ENST00000560273 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
TUBBP8-201ENST00000560273 LMOD2Q6P5Q4 547 aa13.1□□□□□ -0.31
TUBBP8-201ENST00000560273 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
TUBBP8-201ENST00000560273 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
TUBBP8-201ENST00000560273 JCADQ9P266 1359 aa13.09□□□□□ -0.31
TUBBP8-201ENST00000560273 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
TUBBP8-201ENST00000560273 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
TUBBP8-201ENST00000560273 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
TUBBP8-201ENST00000560273 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
TUBBP8-201ENST00000560273 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
TUBBP8-201ENST00000560273 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
TUBBP8-201ENST00000560273 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
TUBBP8-201ENST00000560273 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms