RNA–Protein interactions for RNA: ENST00000559982.1

TMC3-203, Transcript of transmembrane channel like 3, humanhuman

TSL 5

Gene TMC3, Length 2,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-203ENST00000559982 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
TMC3-203ENST00000559982 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
TMC3-203ENST00000559982 DISP3Q9P2K9 1392 aa11.24□□□□□ -0.61
TMC3-203ENST00000559982 USP19O94966 1318 aa11.24□□□□□ -0.61
TMC3-203ENST00000559982 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
TMC3-203ENST00000559982 SYNMO15061 1565 aa11.23□□□□□ -0.61
TMC3-203ENST00000559982 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
TMC3-203ENST00000559982 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
TMC3-203ENST00000559982 NOS1P29475 1434 aa11.22□□□□□ -0.61
TMC3-203ENST00000559982 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
TMC3-203ENST00000559982 INSRP06213 1382 aa11.22□□□□□ -0.61
TMC3-203ENST00000559982 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
TMC3-203ENST00000559982 TESK2Q96S53 571 aa11.22□□□□□ -0.61
TMC3-203ENST00000559982 KIF1BO60333 1816 aa11.21□□□□□ -0.61
TMC3-203ENST00000559982 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
TMC3-203ENST00000559982 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
TMC3-203ENST00000559982 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
TMC3-203ENST00000559982 PIK3C2BO00750 1634 aa11.21□□□□□ -0.62
TMC3-203ENST00000559982 KDM5AP29375 1690 aaKnown RBP11.21□□□□□ -0.62
TMC3-203ENST00000559982 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
TMC3-203ENST00000559982 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
TMC3-203ENST00000559982 POGKQ9P215 609 aa11.2□□□□□ -0.62
TMC3-203ENST00000559982 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
TMC3-203ENST00000559982 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
TMC3-203ENST00000559982 PANK3Q9H999 370 aa11.19□□□□□ -0.62
TMC3-203ENST00000559982 MYOM2P54296 1465 aa11.18□□□□□ -0.62
TMC3-203ENST00000559982 RGS3P49796 1198 aa11.18□□□□□ -0.62
TMC3-203ENST00000559982 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
TMC3-203ENST00000559982 ADGRB3O60242 1522 aa11.18□□□□□ -0.62
TMC3-203ENST00000559982 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
TMC3-203ENST00000559982 SEC24BO95487 1268 aa11.18□□□□□ -0.62
TMC3-203ENST00000559982 EIF3AQ14152 1382 aaKnown RBP11.17□□□□□ -0.62
TMC3-203ENST00000559982 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
TMC3-203ENST00000559982 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
TMC3-203ENST00000559982 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
TMC3-203ENST00000559982 SLIT1O75093 1534 aa11.17□□□□□ -0.62
TMC3-203ENST00000559982 TMF1P82094 1093 aa11.17□□□□□ -0.62
TMC3-203ENST00000559982 MED14O60244 1454 aa11.16□□□□□ -0.62
TMC3-203ENST00000559982 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
TMC3-203ENST00000559982 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
TMC3-203ENST00000559982 ANKLE2Q86XL3 938 aa11.16□□□□□ -0.62
TMC3-203ENST00000559982 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
TMC3-203ENST00000559982 IDI1Q13907 227 aa11.15□□□□□ -0.62
TMC3-203ENST00000559982 IGHDP01880 384 aa11.15□□□□□ -0.63
TMC3-203ENST00000559982 IQGAP1P46940 1657 aa11.15□□□□□ -0.63
TMC3-203ENST00000559982 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
TMC3-203ENST00000559982 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
TMC3-203ENST00000559982 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
TMC3-203ENST00000559982 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
TMC3-203ENST00000559982 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
TMC3-203ENST00000559982 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
TMC3-203ENST00000559982 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
TMC3-203ENST00000559982 LTBP4Q8N2S1 1624 aa11.13□□□□□ -0.63
TMC3-203ENST00000559982 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
TMC3-203ENST00000559982 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
TMC3-203ENST00000559982 TMEM2Q9UHN6 1383 aa11.13□□□□□ -0.63
TMC3-203ENST00000559982 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
TMC3-203ENST00000559982 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 BCAR3O75815 825 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
TMC3-203ENST00000559982 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
TMC3-203ENST00000559982 PPP2R1AP30153 589 aa11.11□□□□□ -0.63
TMC3-203ENST00000559982 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
TMC3-203ENST00000559982 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
TMC3-203ENST00000559982 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
TMC3-203ENST00000559982 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
TMC3-203ENST00000559982 PPLO60437 1756 aa11.1□□□□□ -0.63
TMC3-203ENST00000559982 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
TMC3-203ENST00000559982 LTKP29376 864 aa11.09□□□□□ -0.63
TMC3-203ENST00000559982 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
TMC3-203ENST00000559982 TXNDC2Q86VQ3 553 aa11.09□□□□□ -0.63
TMC3-203ENST00000559982 SLKQ9H2G2 1235 aaPredicted RBP11.09□□□□□ -0.63
TMC3-203ENST00000559982 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
TMC3-203ENST00000559982 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
TMC3-203ENST00000559982 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
TMC3-203ENST00000559982 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
TMC3-203ENST00000559982 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
TMC3-203ENST00000559982 IQSEC2Q5JU85 1478 aa11.08□□□□□ -0.64
TMC3-203ENST00000559982 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
TMC3-203ENST00000559982 CPS1P31327 1500 aa11.07□□□□□ -0.64
TMC3-203ENST00000559982 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
TMC3-203ENST00000559982 XRCC6P12956 609 aaKnown RBP eCLIP11.06□□□□□ -0.64
TMC3-203ENST00000559982 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
TMC3-203ENST00000559982 PANK2Q9BZ23 570 aa11.06□□□□□ -0.64
TMC3-203ENST00000559982 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
TMC3-203ENST00000559982 NEXMIFQ5QGS0 1516 aa11.05□□□□□ -0.64
TMC3-203ENST00000559982 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 PLEKHG1Q9ULL1 1385 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 MYOM1P52179 1685 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 FSD2A1L4K1 749 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 APAF1O14727 1248 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMC3-203ENST00000559982 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 SBNO2Q9Y2G9 1366 aa11.04□□□□□ -0.64
TMC3-203ENST00000559982 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
TMC3-203ENST00000559982 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
TMC3-203ENST00000559982 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms