RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
TM2D3-208ENST00000559891 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
TM2D3-208ENST00000559891 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
TM2D3-208ENST00000559891 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
TM2D3-208ENST00000559891 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
TM2D3-208ENST00000559891 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 FAM135BQ49AJ0 1406 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
TM2D3-208ENST00000559891 MIER1Q8N108 512 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
TM2D3-208ENST00000559891 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
TM2D3-208ENST00000559891 SIRT1Q96EB6 747 aa16.15■□□□□ 0.18
TM2D3-208ENST00000559891 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
TM2D3-208ENST00000559891 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
TM2D3-208ENST00000559891 TMF1P82094 1093 aa16.13■□□□□ 0.17
TM2D3-208ENST00000559891 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
TM2D3-208ENST00000559891 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
TM2D3-208ENST00000559891 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
TM2D3-208ENST00000559891 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
TM2D3-208ENST00000559891 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
TM2D3-208ENST00000559891 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
TM2D3-208ENST00000559891 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
TM2D3-208ENST00000559891 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
TM2D3-208ENST00000559891 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
TM2D3-208ENST00000559891 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
TM2D3-208ENST00000559891 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
TM2D3-208ENST00000559891 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
TM2D3-208ENST00000559891 PRR36Q9H6K5 1346 aa16.09■□□□□ 0.17
TM2D3-208ENST00000559891 YTHDC1Q96MU7 727 aaKnown RBP16.08■□□□□ 0.16
TM2D3-208ENST00000559891 LTBP4Q8N2S1 1624 aa16.07■□□□□ 0.16
TM2D3-208ENST00000559891 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
TM2D3-208ENST00000559891 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
TM2D3-208ENST00000559891 ADGRB2O60241 1585 aa16.05■□□□□ 0.16
TM2D3-208ENST00000559891 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
TM2D3-208ENST00000559891 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
TM2D3-208ENST00000559891 NUDT16Q96DE0 195 aaKnown RBP16.04■□□□□ 0.16
TM2D3-208ENST00000559891 USP32Q8NFA0 1604 aa16.03■□□□□ 0.16
TM2D3-208ENST00000559891 MYOM1P52179 1685 aa16.03■□□□□ 0.16
TM2D3-208ENST00000559891 C19orf44Q9H6X5 657 aa16.03■□□□□ 0.16
TM2D3-208ENST00000559891 CABP1Q9NZU7 370 aa16.03■□□□□ 0.16
TM2D3-208ENST00000559891 ATP7BP35670 1465 aa16.02■□□□□ 0.15
TM2D3-208ENST00000559891 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
TM2D3-208ENST00000559891 PMFBP1Q8TBY8 1022 aa16■□□□□ 0.15
TM2D3-208ENST00000559891 ORAI2Q96SN7 254 aa16■□□□□ 0.15
TM2D3-208ENST00000559891 PANK3Q9H999 370 aa16■□□□□ 0.15
TM2D3-208ENST00000559891 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
TM2D3-208ENST00000559891 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
TM2D3-208ENST00000559891 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
TM2D3-208ENST00000559891 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
TM2D3-208ENST00000559891 MSH6P52701 1360 aa15.98■□□□□ 0.15
TM2D3-208ENST00000559891 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
TM2D3-208ENST00000559891 CARD14Q9BXL6 1004 aa15.98■□□□□ 0.15
TM2D3-208ENST00000559891 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
TM2D3-208ENST00000559891 ATF3P18847 181 aa15.97■□□□□ 0.15
TM2D3-208ENST00000559891 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
TM2D3-208ENST00000559891 ATAD2Q6PL18 1390 aa15.96■□□□□ 0.15
TM2D3-208ENST00000559891 MST1RQ04912 1400 aa15.96■□□□□ 0.15
TM2D3-208ENST00000559891 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.15
TM2D3-208ENST00000559891 ESCO1Q5FWF5 840 aa15.96■□□□□ 0.15
TM2D3-208ENST00000559891 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
TM2D3-208ENST00000559891 PUS7Q96PZ0 661 aaKnown RBP15.95■□□□□ 0.14
TM2D3-208ENST00000559891 A0A1W2PP64 1363 aa15.95■□□□□ 0.14
TM2D3-208ENST00000559891 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
TM2D3-208ENST00000559891 C1orf167Q5SNV9 1468 aa15.94■□□□□ 0.14
TM2D3-208ENST00000559891 PER1O15534 1290 aaPredicted RBP15.94■□□□□ 0.14
TM2D3-208ENST00000559891 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
TM2D3-208ENST00000559891 ACEP12821 1306 aa15.94■□□□□ 0.14
TM2D3-208ENST00000559891 MYT1Q01538 1121 aa15.93■□□□□ 0.14
TM2D3-208ENST00000559891 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
TM2D3-208ENST00000559891 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
TM2D3-208ENST00000559891 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
TM2D3-208ENST00000559891 FOXO3O43524 673 aa15.91■□□□□ 0.14
TM2D3-208ENST00000559891 DCCP43146 1447 aa15.91■□□□□ 0.14
TM2D3-208ENST00000559891 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
TM2D3-208ENST00000559891 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
TM2D3-208ENST00000559891 CPSF1Q10570 1443 aaKnown RBP15.9■□□□□ 0.14
TM2D3-208ENST00000559891 ANKRD36BQ8N2N9 1353 aa15.9■□□□□ 0.14
TM2D3-208ENST00000559891 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
TM2D3-208ENST00000559891 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
TM2D3-208ENST00000559891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.13
TM2D3-208ENST00000559891 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
TM2D3-208ENST00000559891 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
TM2D3-208ENST00000559891 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
TM2D3-208ENST00000559891 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
TM2D3-208ENST00000559891 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
TM2D3-208ENST00000559891 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
TM2D3-208ENST00000559891 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
TM2D3-208ENST00000559891 HDGFL2Q7Z4V5 671 aaPredicted RBP15.86■□□□□ 0.13
TM2D3-208ENST00000559891 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
TM2D3-208ENST00000559891 NINLQ9Y2I6 1382 aa15.86■□□□□ 0.13
TM2D3-208ENST00000559891 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
TM2D3-208ENST00000559891 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
TM2D3-208ENST00000559891 AKAP12Q02952 1782 aa15.86■□□□□ 0.13
TM2D3-208ENST00000559891 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
TM2D3-208ENST00000559891 NME9Q86XW9 330 aa15.85■□□□□ 0.13
TM2D3-208ENST00000559891 USP6P35125 1406 aa15.84■□□□□ 0.13
TM2D3-208ENST00000559891 GGNBP2Q9H3C7 697 aa15.84■□□□□ 0.13
TM2D3-208ENST00000559891 MON2Q7Z3U7 1717 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms