RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
HERC1-204ENST00000559715 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
HERC1-204ENST00000559715 PXDNQ92626 1479 aa16.76■□□□□ 0.27
HERC1-204ENST00000559715 TECPR2O15040 1411 aa16.76■□□□□ 0.27
HERC1-204ENST00000559715 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
HERC1-204ENST00000559715 MYOM2P54296 1465 aa16.74■□□□□ 0.27
HERC1-204ENST00000559715 MARF1Q9Y4F3 1742 aaKnown RBP16.74■□□□□ 0.27
HERC1-204ENST00000559715 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
HERC1-204ENST00000559715 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
HERC1-204ENST00000559715 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
HERC1-204ENST00000559715 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
HERC1-204ENST00000559715 NGLY1Q96IV0 654 aa16.71■□□□□ 0.27
HERC1-204ENST00000559715 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
HERC1-204ENST00000559715 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
HERC1-204ENST00000559715 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
HERC1-204ENST00000559715 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
HERC1-204ENST00000559715 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
HERC1-204ENST00000559715 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
HERC1-204ENST00000559715 ATRNO75882 1429 aa16.7■□□□□ 0.26
HERC1-204ENST00000559715 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
HERC1-204ENST00000559715 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
HERC1-204ENST00000559715 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
HERC1-204ENST00000559715 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
HERC1-204ENST00000559715 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
HERC1-204ENST00000559715 FOXO3O43524 673 aa16.68■□□□□ 0.26
HERC1-204ENST00000559715 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
HERC1-204ENST00000559715 USP21Q9UK80 565 aa16.68■□□□□ 0.26
HERC1-204ENST00000559715 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
HERC1-204ENST00000559715 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
HERC1-204ENST00000559715 NRXN1Q9ULB1 1477 aa16.67■□□□□ 0.26
HERC1-204ENST00000559715 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
HERC1-204ENST00000559715 STK26Q9P289 416 aa16.66■□□□□ 0.26
HERC1-204ENST00000559715 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
HERC1-204ENST00000559715 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
HERC1-204ENST00000559715 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
HERC1-204ENST00000559715 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
HERC1-204ENST00000559715 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
HERC1-204ENST00000559715 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
HERC1-204ENST00000559715 KIF1AQ12756 1690 aa16.62■□□□□ 0.25
HERC1-204ENST00000559715 SLIT2O94813 1529 aa16.61■□□□□ 0.25
HERC1-204ENST00000559715 GLI3P10071 1580 aa16.61■□□□□ 0.25
HERC1-204ENST00000559715 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
HERC1-204ENST00000559715 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
HERC1-204ENST00000559715 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
HERC1-204ENST00000559715 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
HERC1-204ENST00000559715 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
HERC1-204ENST00000559715 GJD4Q96KN9 370 aaPredicted RBP16.58■□□□□ 0.24
HERC1-204ENST00000559715 ABCA3Q99758 1704 aa16.58■□□□□ 0.24
HERC1-204ENST00000559715 ADGRB1O14514 1584 aa16.56■□□□□ 0.24
HERC1-204ENST00000559715 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
HERC1-204ENST00000559715 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
HERC1-204ENST00000559715 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
HERC1-204ENST00000559715 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
HERC1-204ENST00000559715 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
HERC1-204ENST00000559715 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
HERC1-204ENST00000559715 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
HERC1-204ENST00000559715 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
HERC1-204ENST00000559715 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
HERC1-204ENST00000559715 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
HERC1-204ENST00000559715 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
HERC1-204ENST00000559715 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
HERC1-204ENST00000559715 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
HERC1-204ENST00000559715 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
HERC1-204ENST00000559715 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
HERC1-204ENST00000559715 ONECUT3O60422 494 aaPredicted RBP16.5■□□□□ 0.23
HERC1-204ENST00000559715 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
HERC1-204ENST00000559715 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
HERC1-204ENST00000559715 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
HERC1-204ENST00000559715 NRAPQ86VF7 1730 aa16.48■□□□□ 0.23
HERC1-204ENST00000559715 ANKARQ7Z5J8 1434 aa16.48■□□□□ 0.23
HERC1-204ENST00000559715 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
HERC1-204ENST00000559715 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
HERC1-204ENST00000559715 ACIN1Q9UKV3 1341 aaKnown RBP16.47■□□□□ 0.23
HERC1-204ENST00000559715 VPS72Q15906 364 aa16.47■□□□□ 0.23
HERC1-204ENST00000559715 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
HERC1-204ENST00000559715 PSME1Q06323 249 aa16.45■□□□□ 0.22
HERC1-204ENST00000559715 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
HERC1-204ENST00000559715 SEPT12Q8IYM1 358 aa16.44■□□□□ 0.22
HERC1-204ENST00000559715 BLMP54132 1417 aaPredicted RBP16.44■□□□□ 0.22
HERC1-204ENST00000559715 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
HERC1-204ENST00000559715 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
HERC1-204ENST00000559715 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
HERC1-204ENST00000559715 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
HERC1-204ENST00000559715 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
HERC1-204ENST00000559715 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
HERC1-204ENST00000559715 POGKQ9P215 609 aa16.41■□□□□ 0.22
HERC1-204ENST00000559715 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
HERC1-204ENST00000559715 COL14A1Q05707 1796 aaKnown RBP16.4■□□□□ 0.22
HERC1-204ENST00000559715 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
HERC1-204ENST00000559715 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
HERC1-204ENST00000559715 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
HERC1-204ENST00000559715 ATP7BP35670 1465 aa16.38■□□□□ 0.21
HERC1-204ENST00000559715 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
HERC1-204ENST00000559715 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
HERC1-204ENST00000559715 KDM2AQ9Y2K7 1162 aa16.37■□□□□ 0.21
HERC1-204ENST00000559715 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
HERC1-204ENST00000559715 HRCP23327 699 aa16.36■□□□□ 0.21
HERC1-204ENST00000559715 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
HERC1-204ENST00000559715 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
HERC1-204ENST00000559715 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms