RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
IPO4-209ENST00000559588 SASS6Q6UVJ0 657 aa13.46□□□□□ -0.25
IPO4-209ENST00000559588 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.25
IPO4-209ENST00000559588 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
IPO4-209ENST00000559588 KDM2BQ8NHM5 1336 aa13.46□□□□□ -0.26
IPO4-209ENST00000559588 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.26
IPO4-209ENST00000559588 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
IPO4-209ENST00000559588 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
IPO4-209ENST00000559588 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
IPO4-209ENST00000559588 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
IPO4-209ENST00000559588 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
IPO4-209ENST00000559588 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
IPO4-209ENST00000559588 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
IPO4-209ENST00000559588 TAF3Q5VWG9 929 aa13.43□□□□□ -0.26
IPO4-209ENST00000559588 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
IPO4-209ENST00000559588 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
IPO4-209ENST00000559588 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
IPO4-209ENST00000559588 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
IPO4-209ENST00000559588 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
IPO4-209ENST00000559588 PZPP20742 1482 aa13.42□□□□□ -0.26
IPO4-209ENST00000559588 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
IPO4-209ENST00000559588 ABCA8O94911 1581 aa13.42□□□□□ -0.26
IPO4-209ENST00000559588 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
IPO4-209ENST00000559588 SKOR2Q2VWA4 1001 aaPredicted RBP13.41□□□□□ -0.26
IPO4-209ENST00000559588 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
IPO4-209ENST00000559588 BCAR3O75815 825 aa13.4□□□□□ -0.26
IPO4-209ENST00000559588 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
IPO4-209ENST00000559588 CHAF1AQ13111 956 aaPredicted RBP13.4□□□□□ -0.26
IPO4-209ENST00000559588 ANTXR1Q9H6X2 564 aa13.4□□□□□ -0.26
IPO4-209ENST00000559588 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
IPO4-209ENST00000559588 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
IPO4-209ENST00000559588 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
IPO4-209ENST00000559588 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
IPO4-209ENST00000559588 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.273e-10■■■■■ 44.2
IPO4-209ENST00000559588 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
IPO4-209ENST00000559588 APAF1O14727 1248 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 TERF1P54274 439 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 FOXD4L5Q5VV16 416 aaPredicted RBP13.38□□□□□ -0.27
IPO4-209ENST00000559588 FOXD4L4Q8WXT5 416 aaPredicted RBP13.38□□□□□ -0.27
IPO4-209ENST00000559588 KIF3AQ9Y496 699 aa13.38□□□□□ -0.27
IPO4-209ENST00000559588 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
IPO4-209ENST00000559588 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
IPO4-209ENST00000559588 TMF1P82094 1093 aa13.36□□□□□ -0.27
IPO4-209ENST00000559588 MCTP1Q6DN14 999 aa13.36□□□□□ -0.27
IPO4-209ENST00000559588 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
IPO4-209ENST00000559588 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
IPO4-209ENST00000559588 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
IPO4-209ENST00000559588 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
IPO4-209ENST00000559588 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
IPO4-209ENST00000559588 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
IPO4-209ENST00000559588 IGHDP01880 384 aa13.35□□□□□ -0.27
IPO4-209ENST00000559588 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
IPO4-209ENST00000559588 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
IPO4-209ENST00000559588 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
IPO4-209ENST00000559588 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
IPO4-209ENST00000559588 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
IPO4-209ENST00000559588 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
IPO4-209ENST00000559588 ZKSCAN5Q9Y2L8 839 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 CD109Q6YHK3 1445 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
IPO4-209ENST00000559588 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
IPO4-209ENST00000559588 TRAPPC8Q9Y2L5 1435 aa13.33□□□□□ -0.27
IPO4-209ENST00000559588 SYCP2Q9BX26 1530 aa13.33□□□□□ -0.28
IPO4-209ENST00000559588 TIGD1Q96MW7 591 aa13.33□□□□□ -0.28
IPO4-209ENST00000559588 USP19O94966 1318 aa13.33□□□□□ -0.28
IPO4-209ENST00000559588 PTMSP20962 102 aa13.33□□□□□ -0.28
IPO4-209ENST00000559588 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
IPO4-209ENST00000559588 ABCC10Q5T3U5 1492 aa13.32□□□□□ -0.28
IPO4-209ENST00000559588 PLCH2O75038 1416 aa13.32□□□□□ -0.28
IPO4-209ENST00000559588 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
IPO4-209ENST00000559588 HMGN5P82970 282 aaKnown RBP13.32□□□□□ -0.28
IPO4-209ENST00000559588 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
IPO4-209ENST00000559588 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
IPO4-209ENST00000559588 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 WDR7Q9Y4E6 1490 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 KDM5CP41229 1560 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 FANCAO15360 1455 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
IPO4-209ENST00000559588 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
IPO4-209ENST00000559588 PLEKHH2Q8IVE3 1493 aa13.31□□□□□ -0.28
IPO4-209ENST00000559588 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
IPO4-209ENST00000559588 PPP1R9BQ96SB3 815 aa13.3□□□□□ -0.28
IPO4-209ENST00000559588 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
IPO4-209ENST00000559588 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
IPO4-209ENST00000559588 KANK1Q14678 1352 aa13.3□□□□□ -0.28
IPO4-209ENST00000559588 SSFA2P28290 1259 aa13.29□□□□□ -0.28
IPO4-209ENST00000559588 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
IPO4-209ENST00000559588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.29□□□□□ -0.28
IPO4-209ENST00000559588 TNNQ9UQP3 1299 aa13.29□□□□□ -0.28
IPO4-209ENST00000559588 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms