RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
USP8-208ENST00000559329 ZNF521Q96K83 1311 aa21.19■□□□□ 0.98
USP8-208ENST00000559329 PLEKHH1Q9ULM0 1364 aa21.19■□□□□ 0.98
USP8-208ENST00000559329 ZMYM3Q14202 1370 aa21.18■□□□□ 0.98
USP8-208ENST00000559329 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
USP8-208ENST00000559329 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
USP8-208ENST00000559329 STK26Q9P289 416 aa21.17■□□□□ 0.98
USP8-208ENST00000559329 NRXN3Q9Y4C0 1643 aa21.17■□□□□ 0.98
USP8-208ENST00000559329 SHPRHQ149N8 1683 aa21.17■□□□□ 0.98
USP8-208ENST00000559329 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
USP8-208ENST00000559329 NSD2O96028 1365 aa21.16■□□□□ 0.98
USP8-208ENST00000559329 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
USP8-208ENST00000559329 B4GALNT3Q6L9W6 998 aa21.16■□□□□ 0.98
USP8-208ENST00000559329 CGNL1Q0VF96 1302 aa21.15■□□□□ 0.98
USP8-208ENST00000559329 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
USP8-208ENST00000559329 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.97
USP8-208ENST00000559329 SAFB2Q14151 953 aaKnown RBP eCLIP21.14■□□□□ 0.97
USP8-208ENST00000559329 MORC1Q86VD1 984 aa21.14■□□□□ 0.97
USP8-208ENST00000559329 A0A1W2PP64 1363 aa21.12■□□□□ 0.97
USP8-208ENST00000559329 ABCC11Q96J66 1382 aa21.12■□□□□ 0.97
USP8-208ENST00000559329 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
USP8-208ENST00000559329 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
USP8-208ENST00000559329 MINK1Q8N4C8 1332 aaPredicted RBP21.1■□□□□ 0.97
USP8-208ENST00000559329 POGKQ9P215 609 aa21.1■□□□□ 0.97
USP8-208ENST00000559329 TNRQ92752 1358 aa21.09■□□□□ 0.97
USP8-208ENST00000559329 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
USP8-208ENST00000559329 SRPK2P78362 688 aaKnown RBP21.08■□□□□ 0.97
USP8-208ENST00000559329 DUSP27Q5VZP5 1158 aa21.08■□□□□ 0.96
USP8-208ENST00000559329 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.96
USP8-208ENST00000559329 UBR1Q8IWV7 1749 aa21.08■□□□□ 0.96
USP8-208ENST00000559329 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
USP8-208ENST00000559329 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
USP8-208ENST00000559329 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
USP8-208ENST00000559329 MED14O60244 1454 aa21.06■□□□□ 0.96
USP8-208ENST00000559329 NGEFQ8N5V2 710 aa21.06■□□□□ 0.96
USP8-208ENST00000559329 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
USP8-208ENST00000559329 APAF1O14727 1248 aa21.05■□□□□ 0.96
USP8-208ENST00000559329 GOLGA2Q08379 1002 aa21.05■□□□□ 0.96
USP8-208ENST00000559329 TRMT2AQ8IZ69 625 aaKnown RBP21.05■□□□□ 0.96
USP8-208ENST00000559329 SLFN5Q08AF3 891 aa21.04■□□□□ 0.96
USP8-208ENST00000559329 RBM19Q9Y4C8 960 aaKnown RBP21.04■□□□□ 0.96
USP8-208ENST00000559329 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
USP8-208ENST00000559329 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
USP8-208ENST00000559329 TECPR2O15040 1411 aa21.03■□□□□ 0.96
USP8-208ENST00000559329 METP08581 1390 aa21.02■□□□□ 0.96
USP8-208ENST00000559329 TNNT2P45379 298 aaPredicted RBP21.02■□□□□ 0.96
USP8-208ENST00000559329 MTHFSP49914 203 aa21.02■□□□□ 0.96
USP8-208ENST00000559329 TERF2IPQ9NYB0 399 aa21.02■□□□□ 0.96
USP8-208ENST00000559329 TMEM2Q9UHN6 1383 aa21.02■□□□□ 0.95
USP8-208ENST00000559329 CCDC136Q96JN2 1154 aa21.02■□□□□ 0.95
USP8-208ENST00000559329 CPS1P31327 1500 aa21■□□□□ 0.95
USP8-208ENST00000559329 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
USP8-208ENST00000559329 ATP7BP35670 1465 aa20.99■□□□□ 0.95
USP8-208ENST00000559329 FAM135BQ49AJ0 1406 aa20.99■□□□□ 0.95
USP8-208ENST00000559329 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
USP8-208ENST00000559329 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
USP8-208ENST00000559329 COL3A1P02461 1466 aaPredicted RBP20.98■□□□□ 0.95
USP8-208ENST00000559329 HDGFP51858 240 aaKnown RBP20.98■□□□□ 0.95
USP8-208ENST00000559329 SIRT1Q96EB6 747 aa20.98■□□□□ 0.95
USP8-208ENST00000559329 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
USP8-208ENST00000559329 FYB1O15117 783 aa20.97■□□□□ 0.95
USP8-208ENST00000559329 SPINK5Q9NQ38 1064 aaPredicted RBP20.97■□□□□ 0.95
USP8-208ENST00000559329 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
USP8-208ENST00000559329 NKTRP30414 1462 aaKnown RBP20.95■□□□□ 0.95
USP8-208ENST00000559329 E9PSI1 815 aa20.95■□□□□ 0.94
USP8-208ENST00000559329 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
USP8-208ENST00000559329 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
USP8-208ENST00000559329 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
USP8-208ENST00000559329 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
USP8-208ENST00000559329 GGNBP2Q9H3C7 697 aa20.94■□□□□ 0.94
USP8-208ENST00000559329 C3P01024 1663 aa20.94■□□□□ 0.94
USP8-208ENST00000559329 ADGRB2O60241 1585 aa20.94■□□□□ 0.94
USP8-208ENST00000559329 PLIN1O60240 522 aa20.94■□□□□ 0.94
USP8-208ENST00000559329 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
USP8-208ENST00000559329 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
USP8-208ENST00000559329 WWC1Q8IX03 1113 aa20.92■□□□□ 0.94
USP8-208ENST00000559329 CPSF1Q10570 1443 aaKnown RBP20.91■□□□□ 0.94
USP8-208ENST00000559329 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
USP8-208ENST00000559329 WASLO00401 505 aaPredicted RBP20.91■□□□□ 0.94
USP8-208ENST00000559329 FER1L4A9Z1Z3 1794 aa20.9■□□□□ 0.94
USP8-208ENST00000559329 PNPLA6Q8IY17 1366 aa20.89■□□□□ 0.94
USP8-208ENST00000559329 TXNDC2Q86VQ3 553 aa20.89■□□□□ 0.93
USP8-208ENST00000559329 TCP11L2Q8N4U5 519 aa20.89■□□□□ 0.93
USP8-208ENST00000559329 SLIT1O75093 1534 aa20.89■□□□□ 0.93
USP8-208ENST00000559329 ARHGAP23Q9P227 1491 aa20.89■□□□□ 0.93
USP8-208ENST00000559329 CDC42BPGQ6DT37 1551 aa20.88■□□□□ 0.93
USP8-208ENST00000559329 CCDC27Q2M243 656 aa20.88■□□□□ 0.93
USP8-208ENST00000559329 CRBNQ96SW2 442 aa20.88■□□□□ 0.93
USP8-208ENST00000559329 PPIP5K1Q6PFW1 1433 aa20.87■□□□□ 0.93
USP8-208ENST00000559329 MON2Q7Z3U7 1717 aa20.86■□□□□ 0.93
USP8-208ENST00000559329 LTKP29376 864 aa20.86■□□□□ 0.93
USP8-208ENST00000559329 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
USP8-208ENST00000559329 ROBO2Q9HCK4 1378 aa20.86■□□□□ 0.93
USP8-208ENST00000559329 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
USP8-208ENST00000559329 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
USP8-208ENST00000559329 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
USP8-208ENST00000559329 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
USP8-208ENST00000559329 WDR63Q8IWG1 891 aa20.84■□□□□ 0.93
USP8-208ENST00000559329 AKAP12Q02952 1782 aa20.84■□□□□ 0.93
USP8-208ENST00000559329 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms