RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
USP3-212ENST00000559276 CDC42BPGQ6DT37 1551 aa8.75□□□□□ -1.01
USP3-212ENST00000559276 RGS12O14924 1447 aa8.75□□□□□ -1.01
USP3-212ENST00000559276 RXRBP28702 533 aa8.75□□□□□ -1.01
USP3-212ENST00000559276 TECPR2O15040 1411 aa8.74□□□□□ -1.01
USP3-212ENST00000559276 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
USP3-212ENST00000559276 PXDNQ92626 1479 aa8.74□□□□□ -1.01
USP3-212ENST00000559276 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
USP3-212ENST00000559276 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
USP3-212ENST00000559276 PIK3C2GO75747 1445 aa8.72□□□□□ -1.01
USP3-212ENST00000559276 MYOM2P54296 1465 aa8.72□□□□□ -1.01
USP3-212ENST00000559276 FMN2Q9NZ56 1722 aa8.72□□□□□ -1.01
USP3-212ENST00000559276 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
USP3-212ENST00000559276 QTRT2Q9H974 415 aaKnown RBP8.72□□□□□ -1.01
USP3-212ENST00000559276 CCDC144AA2RUR9 1427 aa8.71□□□□□ -1.01
USP3-212ENST00000559276 ADAMTS2O95450 1211 aa8.71□□□□□ -1.02
USP3-212ENST00000559276 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
USP3-212ENST00000559276 MPHOSPH9Q99550 1183 aa8.71□□□□□ -1.02
USP3-212ENST00000559276 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.02
USP3-212ENST00000559276 ABCC11Q96J66 1382 aa8.71□□□□□ -1.02
USP3-212ENST00000559276 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.02
USP3-212ENST00000559276 BCL9LQ86UU0 1499 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
USP3-212ENST00000559276 RGL3Q3MIN7 710 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 FNBP4Q8N3X1 1017 aaPredicted RBP8.7□□□□□ -1.02
USP3-212ENST00000559276 EP400Q96L91 3159 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 ATRNO75882 1429 aa8.7□□□□□ -1.02
USP3-212ENST00000559276 XPCQ01831 940 aaPredicted RBP8.69□□□□□ -1.02
USP3-212ENST00000559276 NGLY1Q96IV0 654 aa8.69□□□□□ -1.02
USP3-212ENST00000559276 STK26Q9P289 416 aa8.69□□□□□ -1.02
USP3-212ENST00000559276 YTHDC2Q9H6S0 1430 aaKnown RBP8.69□□□□□ -1.02
USP3-212ENST00000559276 FOXO3O43524 673 aa8.68□□□□□ -1.02
USP3-212ENST00000559276 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
USP3-212ENST00000559276 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
USP3-212ENST00000559276 KIF1AQ12756 1690 aa8.67□□□□□ -1.02
USP3-212ENST00000559276 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
USP3-212ENST00000559276 USP32Q8NFA0 1604 aa8.67□□□□□ -1.02
USP3-212ENST00000559276 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.67□□□□□ -1.02
USP3-212ENST00000559276 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
USP3-212ENST00000559276 USP21Q9UK80 565 aa8.67□□□□□ -1.02
USP3-212ENST00000559276 GLI3P10071 1580 aa8.66□□□□□ -1.02
USP3-212ENST00000559276 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
USP3-212ENST00000559276 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
USP3-212ENST00000559276 ADGRB1O14514 1584 aa8.65□□□□□ -1.02
USP3-212ENST00000559276 SLIT2O94813 1529 aa8.65□□□□□ -1.02
USP3-212ENST00000559276 SPATA31A3Q5VYP0 1347 aa8.65□□□□□ -1.02
USP3-212ENST00000559276 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
USP3-212ENST00000559276 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
USP3-212ENST00000559276 TRPC5Q9UL62 973 aaPredicted RBP8.65□□□□□ -1.02
USP3-212ENST00000559276 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
USP3-212ENST00000559276 BRWD3Q6RI45 1802 aa8.64□□□□□ -1.03
USP3-212ENST00000559276 TRPM3Q9HCF6 1732 aaPredicted RBP8.63□□□□□ -1.03
USP3-212ENST00000559276 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
USP3-212ENST00000559276 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
USP3-212ENST00000559276 RALGAPBQ86X10 1494 aa8.63□□□□□ -1.03
USP3-212ENST00000559276 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
USP3-212ENST00000559276 ATAD2Q6PL18 1390 aa8.62□□□□□ -1.03
USP3-212ENST00000559276 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
USP3-212ENST00000559276 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
USP3-212ENST00000559276 PRAM1Q96QH2 718 aa8.62□□□□□ -1.03
USP3-212ENST00000559276 TNS3Q68CZ2 1445 aa8.62□□□□□ -1.03
USP3-212ENST00000559276 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 CRYBG1Q9Y4K1 1723 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 ALS2Q96Q42 1657 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
USP3-212ENST00000559276 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
USP3-212ENST00000559276 NRAPQ86VF7 1730 aa8.6□□□□□ -1.03
USP3-212ENST00000559276 SAFB2Q14151 953 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP3-212ENST00000559276 UNC5CLQ8IV45 518 aa8.6□□□□□ -1.03
USP3-212ENST00000559276 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
USP3-212ENST00000559276 ANKARQ7Z5J8 1434 aa8.59□□□□□ -1.03
USP3-212ENST00000559276 ARHGEF28Q8N1W1 1705 aaKnown RBP8.58□□□□□ -1.04
USP3-212ENST00000559276 FAM83GA6ND36 823 aa8.58□□□□□ -1.04
USP3-212ENST00000559276 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
USP3-212ENST00000559276 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
USP3-212ENST00000559276 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
USP3-212ENST00000559276 MYT1Q01538 1121 aa8.57□□□□□ -1.04
USP3-212ENST00000559276 VPS72Q15906 364 aa8.57□□□□□ -1.04
USP3-212ENST00000559276 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
USP3-212ENST00000559276 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
USP3-212ENST00000559276 TULP4Q9NRJ4 1543 aa8.57□□□□□ -1.04
USP3-212ENST00000559276 PSME1Q06323 249 aa8.56□□□□□ -1.04
USP3-212ENST00000559276 CCDC125Q86Z20 511 aa8.56□□□□□ -1.04
USP3-212ENST00000559276 ARHGEF10O15013 1369 aa8.56□□□□□ -1.04
USP3-212ENST00000559276 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
USP3-212ENST00000559276 BLMP54132 1417 aaPredicted RBP8.55□□□□□ -1.04
USP3-212ENST00000559276 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 POGKQ9P215 609 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 KDM2AQ9Y2K7 1162 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 ATP7BP35670 1465 aa8.55□□□□□ -1.04
USP3-212ENST00000559276 COL14A1Q05707 1796 aaKnown RBP8.55□□□□□ -1.04
USP3-212ENST00000559276 TOPAZ1Q8N9V7 1692 aa8.54□□□□□ -1.04
USP3-212ENST00000559276 WASLO00401 505 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms