RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
CDC42BPB-204ENST00000559043 PROSER2Q86WR7 435 aaPredicted RBP22.08■■□□□ 1.12
CDC42BPB-204ENST00000559043 C11orf95C9JLR9 678 aaPredicted RBP22.07■■□□□ 1.12
CDC42BPB-204ENST00000559043 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
CDC42BPB-204ENST00000559043 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
CDC42BPB-204ENST00000559043 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
CDC42BPB-204ENST00000559043 NKTRP30414 1462 aaKnown RBP22.04■■□□□ 1.12
CDC42BPB-204ENST00000559043 QRICH2Q9H0J4 1663 aa22.03■■□□□ 1.12
CDC42BPB-204ENST00000559043 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
CDC42BPB-204ENST00000559043 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
CDC42BPB-204ENST00000559043 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
CDC42BPB-204ENST00000559043 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
CDC42BPB-204ENST00000559043 SBNO2Q9Y2G9 1366 aa22.01■■□□□ 1.11
CDC42BPB-204ENST00000559043 DISP3Q9P2K9 1392 aa22■■□□□ 1.11
CDC42BPB-204ENST00000559043 XIRP1Q702N8 1843 aaKnown RBP21.99■■□□□ 1.11
CDC42BPB-204ENST00000559043 TULP4Q9NRJ4 1543 aa21.97■■□□□ 1.11
CDC42BPB-204ENST00000559043 NALCNQ8IZF0 1738 aa21.96■■□□□ 1.11
CDC42BPB-204ENST00000559043 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
CDC42BPB-204ENST00000559043 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
CDC42BPB-204ENST00000559043 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
CDC42BPB-204ENST00000559043 TMF1P82094 1093 aa21.94■■□□□ 1.1
CDC42BPB-204ENST00000559043 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
CDC42BPB-204ENST00000559043 C19orf44Q9H6X5 657 aa21.94■■□□□ 1.1
CDC42BPB-204ENST00000559043 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
CDC42BPB-204ENST00000559043 WASHC2AQ641Q2 1341 aa21.93■■□□□ 1.1
CDC42BPB-204ENST00000559043 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
CDC42BPB-204ENST00000559043 KIF7Q2M1P5 1343 aa21.92■■□□□ 1.1
CDC42BPB-204ENST00000559043 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
CDC42BPB-204ENST00000559043 NUTM2FA1L443 756 aa21.92■■□□□ 1.1
CDC42BPB-204ENST00000559043 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
CDC42BPB-204ENST00000559043 PRR36Q9H6K5 1346 aa21.9■■□□□ 1.1
CDC42BPB-204ENST00000559043 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
CDC42BPB-204ENST00000559043 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
CDC42BPB-204ENST00000559043 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
CDC42BPB-204ENST00000559043 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
CDC42BPB-204ENST00000559043 CDC42BPGQ6DT37 1551 aa21.86■■□□□ 1.09
CDC42BPB-204ENST00000559043 CCER2I3L3R5 266 aa21.86■■□□□ 1.09
CDC42BPB-204ENST00000559043 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
CDC42BPB-204ENST00000559043 MSH6P52701 1360 aa21.85■■□□□ 1.09
CDC42BPB-204ENST00000559043 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
CDC42BPB-204ENST00000559043 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.09
CDC42BPB-204ENST00000559043 ANP32CO43423 234 aa21.83■■□□□ 1.09
CDC42BPB-204ENST00000559043 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.09
CDC42BPB-204ENST00000559043 RGPD8O14715 1765 aaPredicted RBP21.83■■□□□ 1.08
CDC42BPB-204ENST00000559043 ATF3P18847 181 aa21.83■■□□□ 1.08
CDC42BPB-204ENST00000559043 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.08
CDC42BPB-204ENST00000559043 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
CDC42BPB-204ENST00000559043 ATP7BP35670 1465 aa21.82■■□□□ 1.08
CDC42BPB-204ENST00000559043 DCCP43146 1447 aa21.81■■□□□ 1.08
CDC42BPB-204ENST00000559043 CADPS2Q86UW7 1296 aa21.81■■□□□ 1.08
CDC42BPB-204ENST00000559043 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
CDC42BPB-204ENST00000559043 CABP1Q9NZU7 370 aa21.8■■□□□ 1.08
CDC42BPB-204ENST00000559043 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
CDC42BPB-204ENST00000559043 MST1RQ04912 1400 aa21.8■■□□□ 1.08
CDC42BPB-204ENST00000559043 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
CDC42BPB-204ENST00000559043 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
CDC42BPB-204ENST00000559043 TMC1Q8TDI8 760 aa21.78■■□□□ 1.08
CDC42BPB-204ENST00000559043 SLAIN2Q9P270 581 aa21.78■■□□□ 1.08
CDC42BPB-204ENST00000559043 ATAD2Q6PL18 1390 aa21.77■■□□□ 1.08
CDC42BPB-204ENST00000559043 ANKARQ7Z5J8 1434 aa21.76■■□□□ 1.07
CDC42BPB-204ENST00000559043 MYOM1P52179 1685 aa21.76■■□□□ 1.07
CDC42BPB-204ENST00000559043 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
CDC42BPB-204ENST00000559043 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
CDC42BPB-204ENST00000559043 ESCO1Q5FWF5 840 aa21.75■■□□□ 1.07
CDC42BPB-204ENST00000559043 PLEKHG3A1L390 1219 aa21.74■■□□□ 1.07
CDC42BPB-204ENST00000559043 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
CDC42BPB-204ENST00000559043 CD163L1Q9NR16 1453 aa21.73■■□□□ 1.07
CDC42BPB-204ENST00000559043 PANK3Q9H999 370 aa21.72■■□□□ 1.07
CDC42BPB-204ENST00000559043 PHF8Q9UPP1 1060 aa21.72■■□□□ 1.07
CDC42BPB-204ENST00000559043 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
CDC42BPB-204ENST00000559043 ACEP12821 1306 aa21.71■■□□□ 1.07
CDC42BPB-204ENST00000559043 BRINP3Q76B58 766 aa21.7■■□□□ 1.07
CDC42BPB-204ENST00000559043 DDX17Q92841 729 aaKnown RBP21.69■■□□□ 1.06
CDC42BPB-204ENST00000559043 IQSEC2Q5JU85 1478 aa21.68■■□□□ 1.06
CDC42BPB-204ENST00000559043 FOXO3O43524 673 aa21.68■■□□□ 1.06
CDC42BPB-204ENST00000559043 CPSF1Q10570 1443 aaKnown RBP21.68■■□□□ 1.06
CDC42BPB-204ENST00000559043 A0A1W2PP64 1363 aa21.67■■□□□ 1.06
CDC42BPB-204ENST00000559043 UBAP1LF5GYI3 381 aa21.67■■□□□ 1.06
CDC42BPB-204ENST00000559043 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
CDC42BPB-204ENST00000559043 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
CDC42BPB-204ENST00000559043 NINLQ9Y2I6 1382 aa21.66■■□□□ 1.06
CDC42BPB-204ENST00000559043 ITSN1Q15811 1721 aa21.66■■□□□ 1.06
CDC42BPB-204ENST00000559043 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
CDC42BPB-204ENST00000559043 TOM1O60784 492 aa21.65■■□□□ 1.06
CDC42BPB-204ENST00000559043 ANKRD36BQ8N2N9 1353 aa21.65■■□□□ 1.06
CDC42BPB-204ENST00000559043 XPCQ01831 940 aaPredicted RBP21.64■■□□□ 1.05
CDC42BPB-204ENST00000559043 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
CDC42BPB-204ENST00000559043 PIP4K2BP78356 416 aa21.63■■□□□ 1.05
CDC42BPB-204ENST00000559043 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
CDC42BPB-204ENST00000559043 ZNF692Q9BU19 519 aaPredicted RBP21.61■■□□□ 1.05
CDC42BPB-204ENST00000559043 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
CDC42BPB-204ENST00000559043 AKAP12Q02952 1782 aa21.6■■□□□ 1.05
CDC42BPB-204ENST00000559043 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
CDC42BPB-204ENST00000559043 USP6P35125 1406 aa21.6■■□□□ 1.05
CDC42BPB-204ENST00000559043 SSH2Q76I76 1423 aa21.6■■□□□ 1.05
CDC42BPB-204ENST00000559043 PSME1Q06323 249 aa21.59■■□□□ 1.05
CDC42BPB-204ENST00000559043 ROBO1Q9Y6N7 1651 aa21.59■■□□□ 1.05
CDC42BPB-204ENST00000559043 KRT28Q7Z3Y7 464 aa21.58■■□□□ 1.05
CDC42BPB-204ENST00000559043 NSD3Q9BZ95 1437 aa21.58■■□□□ 1.05
CDC42BPB-204ENST00000559043 KIF1AQ12756 1690 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms