RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
COPS2-206ENST00000559016 IDI1Q13907 227 aa11.78□□□□□ -0.52
COPS2-206ENST00000559016 C14orf93Q9H972 538 aaKnown RBP11.78□□□□□ -0.52
COPS2-206ENST00000559016 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
COPS2-206ENST00000559016 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
COPS2-206ENST00000559016 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
COPS2-206ENST00000559016 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
COPS2-206ENST00000559016 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
COPS2-206ENST00000559016 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
COPS2-206ENST00000559016 ZMYM3Q14202 1370 aa11.74□□□□□ -0.53
COPS2-206ENST00000559016 RALBP1Q15311 655 aa11.73□□□□□ -0.53
COPS2-206ENST00000559016 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
COPS2-206ENST00000559016 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
COPS2-206ENST00000559016 A2ML1A8K2U0 1454 aa11.71□□□□□ -0.53
COPS2-206ENST00000559016 FBXO31Q5XUX0 539 aaPredicted RBP11.71□□□□□ -0.53
COPS2-206ENST00000559016 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
COPS2-206ENST00000559016 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
COPS2-206ENST00000559016 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
COPS2-206ENST00000559016 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
COPS2-206ENST00000559016 ARHGEF28Q8N1W1 1705 aaKnown RBP11.7□□□□□ -0.54
COPS2-206ENST00000559016 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
COPS2-206ENST00000559016 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
COPS2-206ENST00000559016 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
COPS2-206ENST00000559016 MYOM1P52179 1685 aa11.69□□□□□ -0.54
COPS2-206ENST00000559016 CENPJQ9HC77 1338 aaPredicted RBP11.69□□□□□ -0.54
COPS2-206ENST00000559016 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.69□□□□□ -0.54
COPS2-206ENST00000559016 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
COPS2-206ENST00000559016 MLECQ14165 292 aa11.68□□□□□ -0.54
COPS2-206ENST00000559016 FER1L4A9Z1Z3 1794 aa11.68□□□□□ -0.54
COPS2-206ENST00000559016 TNRQ92752 1358 aa11.67□□□□□ -0.54
COPS2-206ENST00000559016 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
COPS2-206ENST00000559016 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
COPS2-206ENST00000559016 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
COPS2-206ENST00000559016 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
COPS2-206ENST00000559016 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
COPS2-206ENST00000559016 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
COPS2-206ENST00000559016 C3P01024 1663 aa11.66□□□□□ -0.54
COPS2-206ENST00000559016 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
COPS2-206ENST00000559016 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
COPS2-206ENST00000559016 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
COPS2-206ENST00000559016 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
COPS2-206ENST00000559016 PANK3Q9H999 370 aa11.65□□□□□ -0.54
COPS2-206ENST00000559016 SETD1AO15047 1707 aaKnown RBP11.65□□□□□ -0.54
COPS2-206ENST00000559016 DLC1Q96QB1 1528 aa11.65□□□□□ -0.55
COPS2-206ENST00000559016 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
COPS2-206ENST00000559016 TRAK1Q9UPV9 953 aa11.63□□□□□ -0.55
COPS2-206ENST00000559016 INSRP06213 1382 aa11.63□□□□□ -0.55
COPS2-206ENST00000559016 YTHDC2Q9H6S0 1430 aaKnown RBP11.62□□□□□ -0.55
COPS2-206ENST00000559016 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 KNSTRNQ9Y448 316 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
COPS2-206ENST00000559016 EVC2Q86UK5 1308 aa11.61□□□□□ -0.55
COPS2-206ENST00000559016 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
COPS2-206ENST00000559016 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
COPS2-206ENST00000559016 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
COPS2-206ENST00000559016 PTPRMP28827 1452 aa11.61□□□□□ -0.55
COPS2-206ENST00000559016 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 C7P10643 843 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
COPS2-206ENST00000559016 CCDC184Q52MB2 194 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
COPS2-206ENST00000559016 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
COPS2-206ENST00000559016 ABCC11Q96J66 1382 aa11.59□□□□□ -0.55
COPS2-206ENST00000559016 PNISRQ8TF01 805 aaKnown RBP11.59□□□□□ -0.55
COPS2-206ENST00000559016 GTF3C3Q9Y5Q9 886 aa11.59□□□□□ -0.55
COPS2-206ENST00000559016 SLIT1O75093 1534 aa11.59□□□□□ -0.55
COPS2-206ENST00000559016 HNRNPUQ00839 825 aaKnown RBP eCLIP11.58□□□□□ -0.56
COPS2-206ENST00000559016 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
COPS2-206ENST00000559016 TULP4Q9NRJ4 1543 aa11.58□□□□□ -0.56
COPS2-206ENST00000559016 ARHGAP23Q9P227 1491 aa11.57□□□□□ -0.56
COPS2-206ENST00000559016 ASTLQ6HA08 431 aaPredicted RBP11.57□□□□□ -0.56
COPS2-206ENST00000559016 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
COPS2-206ENST00000559016 TECPR2O15040 1411 aa11.57□□□□□ -0.56
COPS2-206ENST00000559016 ZBED9Q6R2W3 1325 aa11.57□□□□□ -0.56
COPS2-206ENST00000559016 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
COPS2-206ENST00000559016 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
COPS2-206ENST00000559016 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
COPS2-206ENST00000559016 FAM135BQ49AJ0 1406 aa11.56□□□□□ -0.56
COPS2-206ENST00000559016 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
COPS2-206ENST00000559016 FAM9BQ8IZU0 186 aa11.56□□□□□ -0.56
COPS2-206ENST00000559016 ADAMTSL3P82987 1691 aa11.55□□□□□ -0.56
COPS2-206ENST00000559016 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
COPS2-206ENST00000559016 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
COPS2-206ENST00000559016 CPS1P31327 1500 aa11.55□□□□□ -0.56
COPS2-206ENST00000559016 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
COPS2-206ENST00000559016 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
COPS2-206ENST00000559016 POGKQ9P215 609 aa11.54□□□□□ -0.56
COPS2-206ENST00000559016 EID1Q9Y6B2 187 aa11.54□□□□□ -0.56
COPS2-206ENST00000559016 NSD2O96028 1365 aa11.54□□□□□ -0.56
COPS2-206ENST00000559016 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
COPS2-206ENST00000559016 MED14O60244 1454 aa11.53□□□□□ -0.56
COPS2-206ENST00000559016 CC2D1BQ5T0F9 858 aaKnown RBP11.53□□□□□ -0.56
COPS2-206ENST00000559016 PRAM1Q96QH2 718 aa11.53□□□□□ -0.56
COPS2-206ENST00000559016 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
COPS2-206ENST00000559016 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms