RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
CTDSPL2-205ENST00000558968 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
CTDSPL2-205ENST00000558968 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
CTDSPL2-205ENST00000558968 TECPR2O15040 1411 aa15.33■□□□□ 0.04
CTDSPL2-205ENST00000558968 RGPD8O14715 1765 aaPredicted RBP15.32■□□□□ 0.04
CTDSPL2-205ENST00000558968 AFF2P51816 1311 aa15.32■□□□□ 0.04
CTDSPL2-205ENST00000558968 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
CTDSPL2-205ENST00000558968 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
CTDSPL2-205ENST00000558968 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
CTDSPL2-205ENST00000558968 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
CTDSPL2-205ENST00000558968 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
CTDSPL2-205ENST00000558968 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
CTDSPL2-205ENST00000558968 ABCC11Q96J66 1382 aa15.3■□□□□ 0.04
CTDSPL2-205ENST00000558968 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
CTDSPL2-205ENST00000558968 MYOM2P54296 1465 aa15.29■□□□□ 0.04
CTDSPL2-205ENST00000558968 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
CTDSPL2-205ENST00000558968 ADAMTS2O95450 1211 aa15.29■□□□□ 0.04
CTDSPL2-205ENST00000558968 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
CTDSPL2-205ENST00000558968 RXRBP28702 533 aa15.28■□□□□ 0.04
CTDSPL2-205ENST00000558968 PXDNQ92626 1479 aa15.27■□□□□ 0.04
CTDSPL2-205ENST00000558968 MARF1Q9Y4F3 1742 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-205ENST00000558968 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.04
CTDSPL2-205ENST00000558968 CFAP70Q5T0N1 1121 aa15.27■□□□□ 0.04
CTDSPL2-205ENST00000558968 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
CTDSPL2-205ENST00000558968 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
CTDSPL2-205ENST00000558968 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
CTDSPL2-205ENST00000558968 FOXO3O43524 673 aa15.24■□□□□ 0.03
CTDSPL2-205ENST00000558968 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
CTDSPL2-205ENST00000558968 DHX57Q6P158 1386 aaKnown RBP15.24■□□□□ 0.03
CTDSPL2-205ENST00000558968 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
CTDSPL2-205ENST00000558968 QTRT2Q9H974 415 aaKnown RBP15.23■□□□□ 0.03
CTDSPL2-205ENST00000558968 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
CTDSPL2-205ENST00000558968 RGS12O14924 1447 aa15.22■□□□□ 0.03
CTDSPL2-205ENST00000558968 UPF1Q92900 1129 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTDSPL2-205ENST00000558968 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
CTDSPL2-205ENST00000558968 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
CTDSPL2-205ENST00000558968 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
CTDSPL2-205ENST00000558968 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
CTDSPL2-205ENST00000558968 KDM2AQ9Y2K7 1162 aa15.2■□□□□ 0.02
CTDSPL2-205ENST00000558968 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
CTDSPL2-205ENST00000558968 USP32Q8NFA0 1604 aa15.19■□□□□ 0.02
CTDSPL2-205ENST00000558968 USP21Q9UK80 565 aa15.19■□□□□ 0.02
CTDSPL2-205ENST00000558968 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
CTDSPL2-205ENST00000558968 POGKQ9P215 609 aa15.18■□□□□ 0.02
CTDSPL2-205ENST00000558968 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
CTDSPL2-205ENST00000558968 TRAK1Q9UPV9 953 aa15.17■□□□□ 0.02
CTDSPL2-205ENST00000558968 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
CTDSPL2-205ENST00000558968 FNBP4Q8N3X1 1017 aaPredicted RBP15.16■□□□□ 0.02
CTDSPL2-205ENST00000558968 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
CTDSPL2-205ENST00000558968 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
CTDSPL2-205ENST00000558968 SPATA31A3Q5VYP0 1347 aa15.16■□□□□ 0.02
CTDSPL2-205ENST00000558968 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
CTDSPL2-205ENST00000558968 HRCP23327 699 aa15.15■□□□□ 0.02
CTDSPL2-205ENST00000558968 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
CTDSPL2-205ENST00000558968 ATRNO75882 1429 aa15.15■□□□□ 0.02
CTDSPL2-205ENST00000558968 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
CTDSPL2-205ENST00000558968 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
CTDSPL2-205ENST00000558968 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
CTDSPL2-205ENST00000558968 EP400Q96L91 3159 aa15.14■□□□□ 0.01
CTDSPL2-205ENST00000558968 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
CTDSPL2-205ENST00000558968 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
CTDSPL2-205ENST00000558968 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
CTDSPL2-205ENST00000558968 PMFBP1Q8TBY8 1022 aa15.12■□□□□ 0.01
CTDSPL2-205ENST00000558968 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
CTDSPL2-205ENST00000558968 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
CTDSPL2-205ENST00000558968 PLCH1Q4KWH8 1693 aa15.11■□□□□ 0.01
CTDSPL2-205ENST00000558968 PSME1Q06323 249 aa15.1■□□□□ 0.01
CTDSPL2-205ENST00000558968 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
CTDSPL2-205ENST00000558968 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
CTDSPL2-205ENST00000558968 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 SLIT2O94813 1529 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 BRWD3Q6RI45 1802 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
CTDSPL2-205ENST00000558968 GLI3P10071 1580 aa15.08■□□□□ 0
CTDSPL2-205ENST00000558968 STAC3Q96MF2 364 aa15.08■□□□□ 0
CTDSPL2-205ENST00000558968 NWD2Q9ULI1 1742 aa15.08■□□□□ 0
CTDSPL2-205ENST00000558968 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
CTDSPL2-205ENST00000558968 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
CTDSPL2-205ENST00000558968 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
CTDSPL2-205ENST00000558968 GJD4Q96KN9 370 aaPredicted RBP15.06■□□□□ 0
CTDSPL2-205ENST00000558968 ARHGEF10O15013 1369 aa15.06■□□□□ 0
CTDSPL2-205ENST00000558968 EIF3AQ14152 1382 aaKnown RBP15.06■□□□□ 0
CTDSPL2-205ENST00000558968 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
CTDSPL2-205ENST00000558968 CRYBG1Q9Y4K1 1723 aa15.05■□□□□ -0
CTDSPL2-205ENST00000558968 NRAPQ86VF7 1730 aa15.03■□□□□ -0
CTDSPL2-205ENST00000558968 ATP7BP35670 1465 aa15.03■□□□□ -0
CTDSPL2-205ENST00000558968 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
CTDSPL2-205ENST00000558968 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
CTDSPL2-205ENST00000558968 NGDNQ8NEJ9 315 aaKnown RBP15.02■□□□□ -0
CTDSPL2-205ENST00000558968 NBPF1Q3BBV0 1214 aa15.01□□□□□ -0.01
CTDSPL2-205ENST00000558968 COL14A1Q05707 1796 aaKnown RBP15.01□□□□□ -0.01
CTDSPL2-205ENST00000558968 FAM83GA6ND36 823 aa15□□□□□ -0.01
CTDSPL2-205ENST00000558968 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
CTDSPL2-205ENST00000558968 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
CTDSPL2-205ENST00000558968 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms