RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 GRIPAP1Q4V328 841 aa7.13□□□□□ -1.27
LRRC28-212ENST00000558911 J3QL48 77 aa7.12□□□□□ -1.27
LRRC28-212ENST00000558911 GPR37O15354 613 aa7.11□□□□□ -1.27
LRRC28-212ENST00000558911 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
LRRC28-212ENST00000558911 SMPD1P17405 629 aa7.11□□□□□ -1.27
LRRC28-212ENST00000558911 TRIM32Q13049 653 aa7.11□□□□□ -1.27
LRRC28-212ENST00000558911 SNIP1Q8TAD8 396 aaKnown RBP7.11□□□□□ -1.27
LRRC28-212ENST00000558911 MRGPRX2Q96LB1 330 aa7.11□□□□□ -1.27
LRRC28-212ENST00000558911 ATP13A2Q9NQ11 1180 aa7.11□□□□□ -1.27
LRRC28-212ENST00000558911 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
LRRC28-212ENST00000558911 MSS51Q4VC12 460 aa7.1□□□□□ -1.27
LRRC28-212ENST00000558911 WNT7AO00755 349 aa7.09□□□□□ -1.27
LRRC28-212ENST00000558911 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-212ENST00000558911 GPIHBP1Q8IV16 184 aa7.09□□□□□ -1.27
LRRC28-212ENST00000558911 SALL2Q9Y467 1007 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-212ENST00000558911 Q3C1V9 767 aa7.08□□□□□ -1.28
LRRC28-212ENST00000558911 HPS1Q92902 700 aa7.08□□□□□ -1.28
LRRC28-212ENST00000558911 HLA-CQ95604 372 aa7.08□□□□□ -1.28
LRRC28-212ENST00000558911 INSM1Q01101 510 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-212ENST00000558911 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
LRRC28-212ENST00000558911 TERTO14746 1132 aaKnown RBP7.05□□□□□ -1.28
LRRC28-212ENST00000558911 KDM4AO75164 1064 aa7.05□□□□□ -1.28
LRRC28-212ENST00000558911 MMP16P51512 607 aa7.05□□□□□ -1.28
LRRC28-212ENST00000558911 RC3H1Q5TC82 1133 aaKnown RBP7.05□□□□□ -1.28
LRRC28-212ENST00000558911 SENP2Q9HC62 589 aa7.05□□□□□ -1.28
LRRC28-212ENST00000558911 STK17AQ9UEE5 414 aa7.05□□□□□ -1.28
LRRC28-212ENST00000558911 ALDH1A1P00352 501 aa7.04□□□□□ -1.28
LRRC28-212ENST00000558911 CD46P15529 392 aa7.04□□□□□ -1.28
LRRC28-212ENST00000558911 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-212ENST00000558911 GUCA2AQ02747 115 aa7.04□□□□□ -1.28
LRRC28-212ENST00000558911 TRIM47Q96LD4 638 aa7.04□□□□□ -1.28
LRRC28-212ENST00000558911 SKOR1P84550 965 aa7.03□□□□□ -1.28
LRRC28-212ENST00000558911 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
LRRC28-212ENST00000558911 REPIN1Q9BWE0 567 aaKnown RBP7.03□□□□□ -1.28
LRRC28-212ENST00000558911 WIPF1O43516 503 aa7.02□□□□□ -1.29
LRRC28-212ENST00000558911 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
LRRC28-212ENST00000558911 LCE2CQ5TA81 110 aa7.02□□□□□ -1.29
LRRC28-212ENST00000558911 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
LRRC28-212ENST00000558911 BMP1P13497 986 aa7□□□□□ -1.29
LRRC28-212ENST00000558911 VEGFBP49765 207 aa7□□□□□ -1.29
LRRC28-212ENST00000558911 HOXA2O43364 376 aa6.99□□□□□ -1.29
LRRC28-212ENST00000558911 EHBP1Q8NDI1 1231 aa6.99□□□□□ -1.29
LRRC28-212ENST00000558911 WASF2Q9Y6W5 498 aa6.99□□□□□ -1.29
LRRC28-212ENST00000558911 WNT7BP56706 349 aa6.98□□□□□ -1.29
LRRC28-212ENST00000558911 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
LRRC28-212ENST00000558911 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
LRRC28-212ENST00000558911 JUNDP17535 347 aa6.97□□□□□ -1.29
LRRC28-212ENST00000558911 USP46P62068 366 aa6.97□□□□□ -1.29
LRRC28-212ENST00000558911 PTCRAQ6ISU1 281 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-212ENST00000558911 NUTM1Q86Y26 1132 aa6.97□□□□□ -1.29
LRRC28-212ENST00000558911 NUDT12Q9BQG2 462 aa6.97□□□□□ -1.29
LRRC28-212ENST00000558911 IRF6O14896 467 aa6.96□□□□□ -1.3
LRRC28-212ENST00000558911 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-212ENST00000558911 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-212ENST00000558911 KRI1Q8N9T8 703 aaKnown RBP6.96□□□□□ -1.3
LRRC28-212ENST00000558911 C6orf229H3BNL8 230 aa6.95□□□□□ -1.3
LRRC28-212ENST00000558911 PLCB2Q00722 1185 aa6.95□□□□□ -1.3
LRRC28-212ENST00000558911 NXF1Q9UBU9 619 aaKnown RBP6.95□□□□□ -1.3
LRRC28-212ENST00000558911 GMPRP36959 345 aa6.94□□□□□ -1.3
LRRC28-212ENST00000558911 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
LRRC28-212ENST00000558911 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
LRRC28-212ENST00000558911 CCDC102AQ96A19 550 aa6.93□□□□□ -1.3
LRRC28-212ENST00000558911 FAM181BA6NEQ2 426 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 TULP1O00294 542 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-212ENST00000558911 SIAH2O43255 324 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 SH3BP2P78314 561 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 RETREG3Q86VR2 466 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 GPCPD1Q9NPB8 672 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 TLL2Q9Y6L7 1015 aa6.92□□□□□ -1.3
LRRC28-212ENST00000558911 FDX1P10109 184 aa6.91□□□□□ -1.3
LRRC28-212ENST00000558911 MS4A1P11836 297 aa6.91□□□□□ -1.3
LRRC28-212ENST00000558911 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
LRRC28-212ENST00000558911 IRF7Q92985 503 aa6.91□□□□□ -1.3
LRRC28-212ENST00000558911 ZFP42Q96MM3 310 aa6.91□□□□□ -1.3
LRRC28-212ENST00000558911 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-212ENST00000558911 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
LRRC28-212ENST00000558911 CLCN1P35523 988 aa6.9□□□□□ -1.3
LRRC28-212ENST00000558911 BAP1Q92560 729 aa6.9□□□□□ -1.3
LRRC28-212ENST00000558911 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-212ENST00000558911 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
LRRC28-212ENST00000558911 PCDHGC3Q9UN70 934 aa6.89□□□□□ -1.31
LRRC28-212ENST00000558911 SOBPA7XYQ1 873 aa6.88□□□□□ -1.31
LRRC28-212ENST00000558911 NDUFV2P19404 249 aa6.88□□□□□ -1.31
LRRC28-212ENST00000558911 ERBB4Q15303 1308 aa6.87□□□□□ -1.31
LRRC28-212ENST00000558911 NNTQ13423 1086 aa6.87□□□□□ -1.31
LRRC28-212ENST00000558911 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
LRRC28-212ENST00000558911 KDM2AQ9Y2K7 1162 aa6.87□□□□□ -1.31
LRRC28-212ENST00000558911 ARID5BQ14865 1188 aa6.86□□□□□ -1.31
LRRC28-212ENST00000558911 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
LRRC28-212ENST00000558911 H3BM21 787 aa6.85□□□□□ -1.31
LRRC28-212ENST00000558911 SSTR3P32745 418 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-212ENST00000558911 CTHP32929 405 aa6.85□□□□□ -1.31
LRRC28-212ENST00000558911 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
LRRC28-212ENST00000558911 SCARF1Q14162 830 aa6.85□□□□□ -1.31
LRRC28-212ENST00000558911 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
LRRC28-212ENST00000558911 PLEKHG3A1L390 1219 aa6.84□□□□□ -1.31
LRRC28-212ENST00000558911 MOXD2PA6NHM9 499 aa6.84□□□□□ -1.31
LRRC28-212ENST00000558911 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
LRRC28-212ENST00000558911 TTLL12Q14166 644 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-212ENST00000558911 PTPRNQ16849 979 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms