RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 ADGRB3O60242 1522 aa11.66□□□□□ -0.54
EXD1-204ENST00000558881 ZMYM4Q5VZL5 1548 aa11.66□□□□□ -0.54
EXD1-204ENST00000558881 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
EXD1-204ENST00000558881 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
EXD1-204ENST00000558881 PANK3Q9H999 370 aa11.66□□□□□ -0.54
EXD1-204ENST00000558881 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
EXD1-204ENST00000558881 KIF1BO60333 1816 aa11.65□□□□□ -0.54
EXD1-204ENST00000558881 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
EXD1-204ENST00000558881 SIGLEC1Q9BZZ2 1709 aa11.65□□□□□ -0.54
EXD1-204ENST00000558881 EIF5BO60841 1220 aaKnown RBP11.65□□□□□ -0.55
EXD1-204ENST00000558881 FBXO31Q5XUX0 539 aaPredicted RBP11.65□□□□□ -0.55
EXD1-204ENST00000558881 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.55
EXD1-204ENST00000558881 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.55
EXD1-204ENST00000558881 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
EXD1-204ENST00000558881 NRXN1Q9ULB1 1477 aa11.64□□□□□ -0.55
EXD1-204ENST00000558881 SYNMO15061 1565 aa11.63□□□□□ -0.55
EXD1-204ENST00000558881 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
EXD1-204ENST00000558881 MLECQ14165 292 aa11.63□□□□□ -0.55
EXD1-204ENST00000558881 GSE1Q14687 1217 aa11.63□□□□□ -0.55
EXD1-204ENST00000558881 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
EXD1-204ENST00000558881 C14orf93Q9H972 538 aaKnown RBP11.62□□□□□ -0.55
EXD1-204ENST00000558881 RALBP1Q15311 655 aa11.62□□□□□ -0.55
EXD1-204ENST00000558881 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
EXD1-204ENST00000558881 LAS1LQ9Y4W2 734 aaKnown RBP11.62□□□□□ -0.55
EXD1-204ENST00000558881 IFT172Q9UG01 1749 aa11.62□□□□□ -0.55
EXD1-204ENST00000558881 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
EXD1-204ENST00000558881 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
EXD1-204ENST00000558881 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
EXD1-204ENST00000558881 TRAK1Q9UPV9 953 aa11.61□□□□□ -0.55
EXD1-204ENST00000558881 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
EXD1-204ENST00000558881 PNISRQ8TF01 805 aaKnown RBP11.6□□□□□ -0.55
EXD1-204ENST00000558881 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
EXD1-204ENST00000558881 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
EXD1-204ENST00000558881 KIAA1210Q9ULL0 1709 aa11.6□□□□□ -0.55
EXD1-204ENST00000558881 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
EXD1-204ENST00000558881 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
EXD1-204ENST00000558881 PIK3C2BO00750 1634 aa11.59□□□□□ -0.55
EXD1-204ENST00000558881 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
EXD1-204ENST00000558881 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
EXD1-204ENST00000558881 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
EXD1-204ENST00000558881 CDCA8Q53HL2 280 aa11.58□□□□□ -0.55
EXD1-204ENST00000558881 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
EXD1-204ENST00000558881 ZC3H13Q5T200 1668 aaKnown RBP11.58□□□□□ -0.56
EXD1-204ENST00000558881 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
EXD1-204ENST00000558881 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
EXD1-204ENST00000558881 PPLO60437 1756 aa11.57□□□□□ -0.56
EXD1-204ENST00000558881 AGLP35573 1532 aa11.57□□□□□ -0.56
EXD1-204ENST00000558881 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
EXD1-204ENST00000558881 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
EXD1-204ENST00000558881 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
EXD1-204ENST00000558881 CENPJQ9HC77 1338 aaPredicted RBP11.56□□□□□ -0.56
EXD1-204ENST00000558881 MS4A1P11836 297 aa11.56□□□□□ -0.56
EXD1-204ENST00000558881 BACH2Q9BYV9 841 aa11.56□□□□□ -0.56
EXD1-204ENST00000558881 ERVK-7P63135 1459 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 ADGRB1O14514 1584 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 PDE4AP27815 886 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 GLIPR1L2Q4G1C9 344 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 NPM2Q86SE8 214 aaKnown RBP11.55□□□□□ -0.56
EXD1-204ENST00000558881 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
EXD1-204ENST00000558881 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
EXD1-204ENST00000558881 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
EXD1-204ENST00000558881 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
EXD1-204ENST00000558881 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
EXD1-204ENST00000558881 NFKBIBQ15653 356 aa11.52□□□□□ -0.56
EXD1-204ENST00000558881 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.56
EXD1-204ENST00000558881 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.56
EXD1-204ENST00000558881 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.57
EXD1-204ENST00000558881 ZFYVE9O95405 1425 aa11.52□□□□□ -0.57
EXD1-204ENST00000558881 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.57
EXD1-204ENST00000558881 STK26Q9P289 416 aa11.52□□□□□ -0.57
EXD1-204ENST00000558881 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
EXD1-204ENST00000558881 SBNO2Q9Y2G9 1366 aa11.51□□□□□ -0.57
EXD1-204ENST00000558881 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
EXD1-204ENST00000558881 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
EXD1-204ENST00000558881 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
EXD1-204ENST00000558881 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
EXD1-204ENST00000558881 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
EXD1-204ENST00000558881 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
EXD1-204ENST00000558881 MYOM1P52179 1685 aa11.49□□□□□ -0.57
EXD1-204ENST00000558881 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
EXD1-204ENST00000558881 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
EXD1-204ENST00000558881 SPATA31D1Q6ZQQ2 1576 aa11.48□□□□□ -0.57
EXD1-204ENST00000558881 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
EXD1-204ENST00000558881 ASXL1Q8IXJ9 1541 aa11.47□□□□□ -0.57
EXD1-204ENST00000558881 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
EXD1-204ENST00000558881 QRICH2Q9H0J4 1663 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 PRAM1Q96QH2 718 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 ZMYND15Q9H091 742 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 EVC2Q86UK5 1308 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 RIMS2Q9UQ26 1411 aa11.45□□□□□ -0.58
EXD1-204ENST00000558881 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
EXD1-204ENST00000558881 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
EXD1-204ENST00000558881 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
EXD1-204ENST00000558881 YTHDC2Q9H6S0 1430 aaKnown RBP11.44□□□□□ -0.58
EXD1-204ENST00000558881 CEBPAP49715 358 aaPredicted RBP11.43□□□□□ -0.58
EXD1-204ENST00000558881 RRP1P56182 461 aaKnown RBP11.43□□□□□ -0.58
EXD1-204ENST00000558881 ALKQ9UM73 1620 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms