RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
CCDC33-205ENST00000558659 CPS1P31327 1500 aa17.5■□□□□ 0.39
CCDC33-205ENST00000558659 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
CCDC33-205ENST00000558659 SIRT1Q96EB6 747 aa17.5■□□□□ 0.39
CCDC33-205ENST00000558659 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
CCDC33-205ENST00000558659 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
CCDC33-205ENST00000558659 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.49■□□□□ 0.39
CCDC33-205ENST00000558659 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
CCDC33-205ENST00000558659 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
CCDC33-205ENST00000558659 TMF1P82094 1093 aa17.47■□□□□ 0.39
CCDC33-205ENST00000558659 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
CCDC33-205ENST00000558659 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
CCDC33-205ENST00000558659 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.39
CCDC33-205ENST00000558659 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
CCDC33-205ENST00000558659 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
CCDC33-205ENST00000558659 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
CCDC33-205ENST00000558659 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
CCDC33-205ENST00000558659 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
CCDC33-205ENST00000558659 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
CCDC33-205ENST00000558659 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
CCDC33-205ENST00000558659 EVC2Q86UK5 1308 aa17.42■□□□□ 0.38
CCDC33-205ENST00000558659 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
CCDC33-205ENST00000558659 PRR36Q9H6K5 1346 aa17.42■□□□□ 0.38
CCDC33-205ENST00000558659 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
CCDC33-205ENST00000558659 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
CCDC33-205ENST00000558659 TMC1Q8TDI8 760 aa17.39■□□□□ 0.38
CCDC33-205ENST00000558659 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
CCDC33-205ENST00000558659 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
CCDC33-205ENST00000558659 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
CCDC33-205ENST00000558659 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
CCDC33-205ENST00000558659 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
CCDC33-205ENST00000558659 LTBP4Q8N2S1 1624 aa17.37■□□□□ 0.37
CCDC33-205ENST00000558659 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
CCDC33-205ENST00000558659 XIRP1Q702N8 1843 aaKnown RBP17.36■□□□□ 0.37
CCDC33-205ENST00000558659 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
CCDC33-205ENST00000558659 ORAI2Q96SN7 254 aa17.35■□□□□ 0.37
CCDC33-205ENST00000558659 PANK3Q9H999 370 aa17.34■□□□□ 0.37
CCDC33-205ENST00000558659 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
CCDC33-205ENST00000558659 ADGRB2O60241 1585 aa17.33■□□□□ 0.36
CCDC33-205ENST00000558659 ATP7BP35670 1465 aa17.32■□□□□ 0.36
CCDC33-205ENST00000558659 CCDC61Q9Y6R9 512 aa17.32■□□□□ 0.36
CCDC33-205ENST00000558659 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
CCDC33-205ENST00000558659 ATF3P18847 181 aa17.32■□□□□ 0.36
CCDC33-205ENST00000558659 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
CCDC33-205ENST00000558659 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
CCDC33-205ENST00000558659 MSH6P52701 1360 aa17.31■□□□□ 0.36
CCDC33-205ENST00000558659 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
CCDC33-205ENST00000558659 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
CCDC33-205ENST00000558659 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
CCDC33-205ENST00000558659 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
CCDC33-205ENST00000558659 MYOM1P52179 1685 aa17.29■□□□□ 0.36
CCDC33-205ENST00000558659 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
CCDC33-205ENST00000558659 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
CCDC33-205ENST00000558659 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
CCDC33-205ENST00000558659 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
CCDC33-205ENST00000558659 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
CCDC33-205ENST00000558659 NCOA3Q9Y6Q9 1424 aa17.28■□□□□ 0.36
CCDC33-205ENST00000558659 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
CCDC33-205ENST00000558659 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
CCDC33-205ENST00000558659 CADPS2Q86UW7 1296 aa17.27■□□□□ 0.36
CCDC33-205ENST00000558659 MST1RQ04912 1400 aa17.27■□□□□ 0.36
CCDC33-205ENST00000558659 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 ACEP12821 1306 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 SLAIN2Q9P270 581 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 C1orf167Q5SNV9 1468 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 FOXO3O43524 673 aa17.26■□□□□ 0.35
CCDC33-205ENST00000558659 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
CCDC33-205ENST00000558659 PLEKHG3A1L390 1219 aa17.24■□□□□ 0.35
CCDC33-205ENST00000558659 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
CCDC33-205ENST00000558659 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
CCDC33-205ENST00000558659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC33-205ENST00000558659 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
CCDC33-205ENST00000558659 DCCP43146 1447 aa17.22■□□□□ 0.35
CCDC33-205ENST00000558659 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
CCDC33-205ENST00000558659 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
CCDC33-205ENST00000558659 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
CCDC33-205ENST00000558659 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
CCDC33-205ENST00000558659 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.34
CCDC33-205ENST00000558659 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
CCDC33-205ENST00000558659 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
CCDC33-205ENST00000558659 NSD3Q9BZ95 1437 aa17.2■□□□□ 0.34
CCDC33-205ENST00000558659 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
CCDC33-205ENST00000558659 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
CCDC33-205ENST00000558659 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
CCDC33-205ENST00000558659 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
CCDC33-205ENST00000558659 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
CCDC33-205ENST00000558659 PLEKHG5O94827 1062 aa17.18■□□□□ 0.34
CCDC33-205ENST00000558659 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
CCDC33-205ENST00000558659 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
CCDC33-205ENST00000558659 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
CCDC33-205ENST00000558659 PSME1Q06323 249 aa17.17■□□□□ 0.34
CCDC33-205ENST00000558659 NME9Q86XW9 330 aa17.17■□□□□ 0.34
CCDC33-205ENST00000558659 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
CCDC33-205ENST00000558659 NINLQ9Y2I6 1382 aa17.16■□□□□ 0.34
CCDC33-205ENST00000558659 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
CCDC33-205ENST00000558659 FBLN1P23142 703 aa17.16■□□□□ 0.34
CCDC33-205ENST00000558659 MIER1Q8N108 512 aa17.16■□□□□ 0.34
CCDC33-205ENST00000558659 FYB1O15117 783 aa17.15■□□□□ 0.34
CCDC33-205ENST00000558659 USP6P35125 1406 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms