RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SYMPKQ92797 1274 aaKnown RBP6.43□□□□□ -1.38
HERC1-203ENST00000558532 DDRGK1Q96HY6 314 aa6.43□□□□□ -1.38
HERC1-203ENST00000558532 SLC6A16Q9GZN6 736 aa6.43□□□□□ -1.38
HERC1-203ENST00000558532 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.43□□□□□ -1.38
HERC1-203ENST00000558532 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
HERC1-203ENST00000558532 RNF223E7ERA6 249 aa6.42□□□□□ -1.38
HERC1-203ENST00000558532 SPTLC1O15269 473 aa6.42□□□□□ -1.38
HERC1-203ENST00000558532 MSS51Q4VC12 460 aa6.42□□□□□ -1.38
HERC1-203ENST00000558532 PCDHB15Q9Y5E8 787 aa6.42□□□□□ -1.38
HERC1-203ENST00000558532 PPEF1O14829 653 aaPredicted RBP6.41□□□□□ -1.38
HERC1-203ENST00000558532 RIC3Q7Z5B4 369 aa6.41□□□□□ -1.38
HERC1-203ENST00000558532 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
HERC1-203ENST00000558532 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
HERC1-203ENST00000558532 EMID1Q96A84 441 aaPredicted RBP6.4□□□□□ -1.38
HERC1-203ENST00000558532 C6orf229H3BNL8 230 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 GGCXP38435 758 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 CLK2P49760 499 aaKnown RBP6.39□□□□□ -1.39
HERC1-203ENST00000558532 MMP16P51512 607 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 MTMR2Q13614 643 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 QPCTQ16769 361 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 TUSC1Q2TAM9 212 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 PLA2G2CQ5R387 149 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 ANKLE1Q8NAG6 615 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 RSPH6AQ9H0K4 717 aa6.39□□□□□ -1.39
HERC1-203ENST00000558532 RGS20O76081 388 aa6.38□□□□□ -1.39
HERC1-203ENST00000558532 DXOO77932 396 aaKnown RBP6.38□□□□□ -1.39
HERC1-203ENST00000558532 HRCP23327 699 aa6.38□□□□□ -1.39
HERC1-203ENST00000558532 CABLES1Q8TDN4 633 aa6.38□□□□□ -1.39
HERC1-203ENST00000558532 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
HERC1-203ENST00000558532 LILRB3O75022 631 aa6.37□□□□□ -1.39
HERC1-203ENST00000558532 SKIV2LQ15477 1246 aaKnown RBP6.37□□□□□ -1.39
HERC1-203ENST00000558532 CSPP1Q1MSJ5 1256 aa6.37□□□□□ -1.39
HERC1-203ENST00000558532 PRPF38BQ5VTL8 546 aaKnown RBP6.37□□□□□ -1.39
HERC1-203ENST00000558532 FBXO31Q5XUX0 539 aaPredicted RBP6.37□□□□□ -1.39
HERC1-203ENST00000558532 IL27Q8NEV9 243 aa6.37□□□□□ -1.39
HERC1-203ENST00000558532 ZBTB3Q9H5J0 574 aa6.37□□□□□ -1.39
HERC1-203ENST00000558532 FCF1Q9Y324 198 aaKnown RBP6.37□□□□□ -1.39
HERC1-203ENST00000558532 CFAP99D6REC4 459 aa6.36□□□□□ -1.39
HERC1-203ENST00000558532 JUNDP17535 347 aa6.36□□□□□ -1.39
HERC1-203ENST00000558532 PROCA1Q8NCQ7 364 aaPredicted RBP6.36□□□□□ -1.39
HERC1-203ENST00000558532 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
HERC1-203ENST00000558532 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.36□□□□□ -1.39
HERC1-203ENST00000558532 SPDYE5A6NIY4 337 aa6.35□□□□□ -1.39
HERC1-203ENST00000558532 PRKD2Q9BZL6 878 aa6.35□□□□□ -1.39
HERC1-203ENST00000558532 RTL5Q5HYW3 569 aaPredicted RBP6.34□□□□□ -1.39
HERC1-203ENST00000558532 LIAT1Q6ZQX7 453 aa6.34□□□□□ -1.39
HERC1-203ENST00000558532 GOPCQ9HD26 462 aa6.34□□□□□ -1.39
HERC1-203ENST00000558532 DESI1Q6ICB0 168 aa6.33□□□□□ -1.4
HERC1-203ENST00000558532 V9GY48 417 aaPredicted RBP6.33□□□□□ -1.4
HERC1-203ENST00000558532 PTPRNQ16849 979 aa6.32□□□□□ -1.4
HERC1-203ENST00000558532 PPP2R2DQ66LE6 453 aa6.32□□□□□ -1.4
HERC1-203ENST00000558532 NUTM2BA6NNL0 878 aaPredicted RBP6.31□□□□□ -1.4
HERC1-203ENST00000558532 NUTM2EB1AL46 878 aaPredicted RBP6.31□□□□□ -1.4
HERC1-203ENST00000558532 SLC19A1P41440 591 aa6.31□□□□□ -1.4
HERC1-203ENST00000558532 NUTM2DQ5VT03 806 aaPredicted RBP6.31□□□□□ -1.4
HERC1-203ENST00000558532 NUTM2AQ8IVF1 878 aaPredicted RBP6.31□□□□□ -1.4
HERC1-203ENST00000558532 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
HERC1-203ENST00000558532 PER1O15534 1290 aaPredicted RBP6.3□□□□□ -1.4
HERC1-203ENST00000558532 CCNYL3P0C7X3 344 aa6.3□□□□□ -1.4
HERC1-203ENST00000558532 SPRYD7Q5W111 196 aa6.3□□□□□ -1.4
HERC1-203ENST00000558532 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
HERC1-203ENST00000558532 RPIAP49247 311 aa6.29□□□□□ -1.4
HERC1-203ENST00000558532 PTCRAQ6ISU1 281 aaPredicted RBP6.29□□□□□ -1.4
HERC1-203ENST00000558532 CCDC24Q8N4L8 307 aa6.29□□□□□ -1.4
HERC1-203ENST00000558532 PCMTD1Q96MG8 357 aaPredicted RBP6.29□□□□□ -1.4
HERC1-203ENST00000558532 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
HERC1-203ENST00000558532 TSC1Q92574 1164 aa6.28□□□□□ -1.4
HERC1-203ENST00000558532 RFC5P40937 340 aa6.27□□□□□ -1.41
HERC1-203ENST00000558532 TRIM32Q13049 653 aa6.27□□□□□ -1.41
HERC1-203ENST00000558532 TRIM67Q6ZTA4 783 aa6.27□□□□□ -1.41
HERC1-203ENST00000558532 ZNF598Q86UK7 904 aaKnown RBP6.27□□□□□ -1.41
HERC1-203ENST00000558532 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
HERC1-203ENST00000558532 EVA1BQ9NVM1 165 aa6.27□□□□□ -1.41
HERC1-203ENST00000558532 MAP10Q9P2G4 905 aa6.27□□□□□ -1.41
HERC1-203ENST00000558532 CTDSPL2Q05D32 466 aa6.26□□□□□ -1.41
HERC1-203ENST00000558532 KCNH2Q12809 1159 aa6.26□□□□□ -1.41
HERC1-203ENST00000558532 ZNF697Q5TEC3 545 aa6.26□□□□□ -1.41
HERC1-203ENST00000558532 ATP1B4Q9UN42 357 aaPredicted RBP6.26□□□□□ -1.41
HERC1-203ENST00000558532 ZBTB24O43167 697 aaPredicted RBP6.25□□□□□ -1.41
HERC1-203ENST00000558532 UNC93B1Q9H1C4 597 aa6.25□□□□□ -1.41
HERC1-203ENST00000558532 GDF9O60383 454 aa6.24□□□□□ -1.41
HERC1-203ENST00000558532 SKOR1P84550 965 aa6.24□□□□□ -1.41
HERC1-203ENST00000558532 LRRN4Q8WUT4 740 aa6.24□□□□□ -1.41
HERC1-203ENST00000558532 PKD2L1Q9P0L9 805 aa6.24□□□□□ -1.41
HERC1-203ENST00000558532 AP1G2O75843 785 aa6.23□□□□□ -1.41
HERC1-203ENST00000558532 CD2BP2O95400 341 aaKnown RBP6.23□□□□□ -1.41
HERC1-203ENST00000558532 USP17L8P0C7I0 530 aa6.23□□□□□ -1.41
HERC1-203ENST00000558532 CTHP32929 405 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 PRR20EP86478 221 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 PRR20CP86479 221 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 PRR20DP86480 221 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 PRR20BP86481 221 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 PRR20AP86496 221 aa6.22□□□□□ -1.41
HERC1-203ENST00000558532 IRX2Q9BZI1 471 aaPredicted RBP6.22□□□□□ -1.41
HERC1-203ENST00000558532 HMX1Q9NP08 348 aaPredicted RBP6.22□□□□□ -1.41
HERC1-203ENST00000558532 TNFRSF10AO00220 468 aa6.21□□□□□ -1.42
HERC1-203ENST00000558532 WNT7BP56706 349 aa6.21□□□□□ -1.42
HERC1-203ENST00000558532 SH3BP2P78314 561 aa6.21□□□□□ -1.42
HERC1-203ENST00000558532 LINC01559Q495D7 138 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms