RNA–Protein interactions for RNA: ENST00000558496.5

CRTC3-205, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 543 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-205ENST00000558496 ADAMTS2O95450 1211 aa7.98□□□□□ -1.13
CRTC3-205ENST00000558496 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
CRTC3-205ENST00000558496 AMOTL2Q9Y2J4 779 aa7.98□□□□□ -1.13
CRTC3-205ENST00000558496 COL22A1Q8NFW1 1626 aaPredicted RBP7.98□□□□□ -1.13
CRTC3-205ENST00000558496 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.97□□□□□ -1.13
CRTC3-205ENST00000558496 SP7Q8TDD2 431 aaPredicted RBP7.97□□□□□ -1.13
CRTC3-205ENST00000558496 USP21Q9UK80 565 aa7.97□□□□□ -1.13
CRTC3-205ENST00000558496 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
CRTC3-205ENST00000558496 ADGRL3Q9HAR2 1447 aa7.96□□□□□ -1.13
CRTC3-205ENST00000558496 ADGRL2O95490 1459 aa7.96□□□□□ -1.13
CRTC3-205ENST00000558496 CHGAP10645 457 aaKnown RBP7.96□□□□□ -1.14
CRTC3-205ENST00000558496 TRPC5Q9UL62 973 aaPredicted RBP7.96□□□□□ -1.14
CRTC3-205ENST00000558496 BRWD3Q6RI45 1802 aa7.96□□□□□ -1.14
CRTC3-205ENST00000558496 IQGAP3Q86VI3 1631 aa7.96□□□□□ -1.14
CRTC3-205ENST00000558496 PTCH1Q13635 1447 aa7.95□□□□□ -1.14
CRTC3-205ENST00000558496 CCDC125Q86Z20 511 aa7.95□□□□□ -1.14
CRTC3-205ENST00000558496 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.95□□□□□ -1.14
CRTC3-205ENST00000558496 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
CRTC3-205ENST00000558496 ZBTB12Q9Y330 459 aaPredicted RBP7.94□□□□□ -1.14
CRTC3-205ENST00000558496 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
CRTC3-205ENST00000558496 C1orf167Q5SNV9 1468 aa7.94□□□□□ -1.14
CRTC3-205ENST00000558496 BCL9LQ86UU0 1499 aa7.94□□□□□ -1.14
CRTC3-205ENST00000558496 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
CRTC3-205ENST00000558496 METP08581 1390 aa7.93□□□□□ -1.14
CRTC3-205ENST00000558496 BLMP54132 1417 aaPredicted RBP7.93□□□□□ -1.14
CRTC3-205ENST00000558496 MYOM2P54296 1465 aa7.93□□□□□ -1.14
CRTC3-205ENST00000558496 GLI3P10071 1580 aa7.93□□□□□ -1.14
CRTC3-205ENST00000558496 SPHKAPQ2M3C7 1700 aa7.92□□□□□ -1.14
CRTC3-205ENST00000558496 DEFB132Q7Z7B7 95 aa7.91□□□□□ -1.14
CRTC3-205ENST00000558496 GJD4Q96KN9 370 aaPredicted RBP7.9□□□□□ -1.14
CRTC3-205ENST00000558496 ORAI2Q96SN7 254 aa7.9□□□□□ -1.14
CRTC3-205ENST00000558496 NEXMIFQ5QGS0 1516 aa7.89□□□□□ -1.15
CRTC3-205ENST00000558496 RALGAPBQ86X10 1494 aa7.89□□□□□ -1.15
CRTC3-205ENST00000558496 PXDNQ92626 1479 aa7.88□□□□□ -1.15
CRTC3-205ENST00000558496 REM2Q8IYK8 340 aaPredicted RBP7.88□□□□□ -1.15
CRTC3-205ENST00000558496 PLCH1Q4KWH8 1693 aa7.87□□□□□ -1.15
CRTC3-205ENST00000558496 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
CRTC3-205ENST00000558496 USP32Q8NFA0 1604 aa7.87□□□□□ -1.15
CRTC3-205ENST00000558496 SLIT2O94813 1529 aa7.87□□□□□ -1.15
CRTC3-205ENST00000558496 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 CLTCL1P53675 1640 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 HRCP23327 699 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 PIP4P2Q8N4L2 257 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 PRAG1Q86YV5 1406 aa7.86□□□□□ -1.15
CRTC3-205ENST00000558496 KIF1BO60333 1816 aa7.85□□□□□ -1.15
CRTC3-205ENST00000558496 SF3B2Q13435 895 aaKnown RBP7.85□□□□□ -1.15
CRTC3-205ENST00000558496 NWD2Q9ULI1 1742 aa7.85□□□□□ -1.15
CRTC3-205ENST00000558496 RGPD1P0DJD0 1748 aa7.84□□□□□ -1.15
CRTC3-205ENST00000558496 ABCA3Q99758 1704 aa7.84□□□□□ -1.15
CRTC3-205ENST00000558496 XPCQ01831 940 aaPredicted RBP7.84□□□□□ -1.15
CRTC3-205ENST00000558496 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
CRTC3-205ENST00000558496 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
CRTC3-205ENST00000558496 UNC5CLQ8IV45 518 aa7.84□□□□□ -1.15
CRTC3-205ENST00000558496 TNS1Q9HBL0 1735 aaKnown RBP7.83□□□□□ -1.16
CRTC3-205ENST00000558496 NPHP3Q7Z494 1330 aa7.83□□□□□ -1.16
CRTC3-205ENST00000558496 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
CRTC3-205ENST00000558496 NUP155O75694 1391 aa7.83□□□□□ -1.16
CRTC3-205ENST00000558496 HFM1A2PYH4 1435 aa7.82□□□□□ -1.16
CRTC3-205ENST00000558496 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
CRTC3-205ENST00000558496 NRAPQ86VF7 1730 aa7.82□□□□□ -1.16
CRTC3-205ENST00000558496 KIF1AQ12756 1690 aa7.82□□□□□ -1.16
CRTC3-205ENST00000558496 PPLO60437 1756 aa7.82□□□□□ -1.16
CRTC3-205ENST00000558496 FMN2Q9NZ56 1722 aa7.81□□□□□ -1.16
CRTC3-205ENST00000558496 LOC105371045A0A1W2PR82 267 aa7.81□□□□□ -1.16
CRTC3-205ENST00000558496 FOXO3O43524 673 aa7.81□□□□□ -1.16
CRTC3-205ENST00000558496 FXR2P51116 673 aaKnown RBP eCLIP7.81□□□□□ -1.16
CRTC3-205ENST00000558496 KRT27Q7Z3Y8 459 aa7.81□□□□□ -1.16
CRTC3-205ENST00000558496 RGPD8O14715 1765 aaPredicted RBP7.81□□□□□ -1.16
CRTC3-205ENST00000558496 ROCK1Q13464 1354 aa7.81□□□□□ -1.16
CRTC3-205ENST00000558496 ONECUT3O60422 494 aaPredicted RBP7.8□□□□□ -1.16
CRTC3-205ENST00000558496 BAG6P46379 1132 aa7.8□□□□□ -1.16
CRTC3-205ENST00000558496 VPS72Q15906 364 aa7.8□□□□□ -1.16
CRTC3-205ENST00000558496 ATF5Q9Y2D1 282 aaPredicted RBP7.8□□□□□ -1.16
CRTC3-205ENST00000558496 SPATA31A3Q5VYP0 1347 aa7.79□□□□□ -1.16
CRTC3-205ENST00000558496 NAIPQ13075 1403 aa7.79□□□□□ -1.16
CRTC3-205ENST00000558496 HAX1O00165 279 aa7.79□□□□□ -1.16
CRTC3-205ENST00000558496 YY1P25490 414 aa7.79□□□□□ -1.16
CRTC3-205ENST00000558496 EN1Q05925 392 aaPredicted RBP7.79□□□□□ -1.16
CRTC3-205ENST00000558496 R3HDM1Q15032 1099 aaKnown RBP7.79□□□□□ -1.16
CRTC3-205ENST00000558496 LRPPRCP42704 1394 aaKnown RBP7.79□□□□□ -1.16
CRTC3-205ENST00000558496 KNDC1Q76NI1 1749 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 IFT172Q9UG01 1749 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 NUTM2FA1L443 756 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 DISP2A7MBM2 1401 aa7.78□□□□□ -1.16
CRTC3-205ENST00000558496 RREB1Q92766 1687 aa7.77□□□□□ -1.17
CRTC3-205ENST00000558496 THSD7AQ9UPZ6 1657 aa7.77□□□□□ -1.17
CRTC3-205ENST00000558496 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
CRTC3-205ENST00000558496 NUP188Q5SRE5 1749 aa7.77□□□□□ -1.17
CRTC3-205ENST00000558496 TNS3Q68CZ2 1445 aa7.77□□□□□ -1.17
CRTC3-205ENST00000558496 ADGRB2O60241 1585 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 A0A0G2JS52 829 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 PITPNM1O00562 1244 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 MYT1Q01538 1121 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 CABLES1Q8TDN4 633 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 TECPR2O15040 1411 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 CAMTA1Q9Y6Y1 1673 aa7.76□□□□□ -1.17
CRTC3-205ENST00000558496 COL14A1Q05707 1796 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms