RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 ERCC4Q92889 916 aaPredicted RBP13.65□□□□□ -0.22
INO80-205ENST00000558357 LNPKQ9C0E8 428 aa13.65□□□□□ -0.22
INO80-205ENST00000558357 FBXO3Q9UK99 471 aa13.65□□□□□ -0.23
INO80-205ENST00000558357 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
INO80-205ENST00000558357 XBP1P17861 261 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 PSMA5P28066 241 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.64□□□□□ -0.23
INO80-205ENST00000558357 OFD1O75665 1012 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
INO80-205ENST00000558357 FOSBP53539 338 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
INO80-205ENST00000558357 EPS15P42566 896 aa13.63□□□□□ -0.23
INO80-205ENST00000558357 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
INO80-205ENST00000558357 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
INO80-205ENST00000558357 SDF4Q9BRK5 362 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 CWC15Q9P013 229 aaKnown RBP13.62□□□□□ -0.23
INO80-205ENST00000558357 PDILTQ8N807 584 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 MYO6Q9UM54 1294 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
INO80-205ENST00000558357 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
INO80-205ENST00000558357 RDXP35241 583 aaKnown RBP13.61□□□□□ -0.23
INO80-205ENST00000558357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■■■ 122.6
INO80-205ENST00000558357 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
INO80-205ENST00000558357 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
INO80-205ENST00000558357 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 CCP110O43303 1012 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 MBD3O95983 291 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 UBTFL1P0CB47 393 aaPredicted RBP13.6□□□□□ -0.23
INO80-205ENST00000558357 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
INO80-205ENST00000558357 PSME1Q06323 249 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
INO80-205ENST00000558357 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
INO80-205ENST00000558357 KRI1Q8N9T8 703 aaKnown RBP13.59□□□□□ -0.23
INO80-205ENST00000558357 H0YHG0 523 aa13.59□□□□□ -0.23
INO80-205ENST00000558357 TRIM5Q9C035 493 aa13.59□□□□□ -0.23
INO80-205ENST00000558357 CWC22Q9HCG8 908 aaKnown RBP13.58□□□□□ -0.24
INO80-205ENST00000558357 ZFYVE27Q5T4F4 411 aa13.58□□□□□ -0.24
INO80-205ENST00000558357 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.24
INO80-205ENST00000558357 SMARCE1Q969G3 411 aa13.58□□□□□ -0.24
INO80-205ENST00000558357 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.24
INO80-205ENST00000558357 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 MCM2P49736 904 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 KINO60870 393 aaKnown RBP13.57□□□□□ -0.24
INO80-205ENST00000558357 RNF214Q8ND24 703 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 PDCP20941 246 aa13.57□□□□□ -0.24
INO80-205ENST00000558357 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 TRAK2O60296 914 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 SMC2O95347 1197 aa13.56□□□□□ -0.24
INO80-205ENST00000558357 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
INO80-205ENST00000558357 HIP1O00291 1037 aa13.55□□□□□ -0.24
INO80-205ENST00000558357 GNAI3P08754 354 aa13.55□□□□□ -0.24
INO80-205ENST00000558357 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
INO80-205ENST00000558357 HMOX1P09601 288 aa13.55□□□□□ -0.24
INO80-205ENST00000558357 CAVIN1Q6NZI2 390 aaKnown RBP13.55□□□□□ -0.24
INO80-205ENST00000558357 FYB1O15117 783 aa13.55□□□□□ -0.24
INO80-205ENST00000558357 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
INO80-205ENST00000558357 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
INO80-205ENST00000558357 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
INO80-205ENST00000558357 TTLL5Q6EMB2 1281 aa13.54□□□□□ -0.24
INO80-205ENST00000558357 MAGEC2Q9UBF1 373 aaPredicted RBP13.54□□□□□ -0.24
INO80-205ENST00000558357 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
INO80-205ENST00000558357 DHX8Q14562 1220 aaKnown RBP13.54□□□□□ -0.24
INO80-205ENST00000558357 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
INO80-205ENST00000558357 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
INO80-205ENST00000558357 TXLNAP40222 546 aa13.54□□□□□ -0.24
INO80-205ENST00000558357 RABEP1Q15276 862 aa13.53□□□□□ -0.24
INO80-205ENST00000558357 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
INO80-205ENST00000558357 WIZO95785 1651 aa13.52□□□□□ -0.24
INO80-205ENST00000558357 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.24
INO80-205ENST00000558357 CDK5RAP3Q96JB5 506 aa13.52□□□□□ -0.24
INO80-205ENST00000558357 NEK4P51957 841 aa13.52□□□□□ -0.25
INO80-205ENST00000558357 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
INO80-205ENST00000558357 LEKR1Q6ZMV7 388 aa13.52□□□□□ -0.25
INO80-205ENST00000558357 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
INO80-205ENST00000558357 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
INO80-205ENST00000558357 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
INO80-205ENST00000558357 SLC3A2P08195 630 aaKnown RBP13.51□□□□□ -0.25
INO80-205ENST00000558357 IKQ13123 557 aaPredicted RBP13.5□□□□□ -0.25
INO80-205ENST00000558357 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
INO80-205ENST00000558357 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
INO80-205ENST00000558357 SYCP1Q15431 976 aa13.5□□□□□ -0.25
INO80-205ENST00000558357 PTPRGP23470 1445 aa13.5□□□□□ -0.25
INO80-205ENST00000558357 STK38Q15208 465 aa13.5□□□□□ -0.25
INO80-205ENST00000558357 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
INO80-205ENST00000558357 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
INO80-205ENST00000558357 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms