RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
LRRC49-208ENST00000558204 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
LRRC49-208ENST00000558204 ATRNO75882 1429 aa12.51□□□□□ -0.41
LRRC49-208ENST00000558204 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
LRRC49-208ENST00000558204 KCNA4P22459 653 aa12.49□□□□□ -0.41
LRRC49-208ENST00000558204 ITGAEP38570 1179 aa12.49□□□□□ -0.41
LRRC49-208ENST00000558204 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
LRRC49-208ENST00000558204 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
LRRC49-208ENST00000558204 ROCK1Q13464 1354 aa12.46□□□□□ -0.41
LRRC49-208ENST00000558204 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
LRRC49-208ENST00000558204 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
LRRC49-208ENST00000558204 LAMC1P11047 1609 aa12.45□□□□□ -0.42
LRRC49-208ENST00000558204 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
LRRC49-208ENST00000558204 ROBO2Q9HCK4 1378 aa12.44□□□□□ -0.42
LRRC49-208ENST00000558204 XPCQ01831 940 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-208ENST00000558204 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
LRRC49-208ENST00000558204 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
LRRC49-208ENST00000558204 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-208ENST00000558204 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-208ENST00000558204 NEXMIFQ5QGS0 1516 aa12.43□□□□□ -0.42
LRRC49-208ENST00000558204 MYOM2P54296 1465 aa12.43□□□□□ -0.42
LRRC49-208ENST00000558204 EP400Q96L91 3159 aa12.42□□□□□ -0.42
LRRC49-208ENST00000558204 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
LRRC49-208ENST00000558204 FOXO3O43524 673 aa12.42□□□□□ -0.42
LRRC49-208ENST00000558204 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
LRRC49-208ENST00000558204 NUTM2FA1L443 756 aa12.41□□□□□ -0.42
LRRC49-208ENST00000558204 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
LRRC49-208ENST00000558204 UNC5CLQ8IV45 518 aa12.41□□□□□ -0.42
LRRC49-208ENST00000558204 CCDC9Q9Y3X0 531 aaKnown RBP12.41□□□□□ -0.42
LRRC49-208ENST00000558204 LRPPRCP42704 1394 aaKnown RBP12.41□□□□□ -0.42
LRRC49-208ENST00000558204 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
LRRC49-208ENST00000558204 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.42
LRRC49-208ENST00000558204 KIF1BO60333 1816 aa12.4□□□□□ -0.42
LRRC49-208ENST00000558204 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.43
LRRC49-208ENST00000558204 A0A0G2JS52 829 aa12.39□□□□□ -0.43
LRRC49-208ENST00000558204 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
LRRC49-208ENST00000558204 MYT1Q01538 1121 aa12.39□□□□□ -0.43
LRRC49-208ENST00000558204 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
LRRC49-208ENST00000558204 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
LRRC49-208ENST00000558204 PXDNQ92626 1479 aa12.38□□□□□ -0.43
LRRC49-208ENST00000558204 GLI3P10071 1580 aa12.37□□□□□ -0.43
LRRC49-208ENST00000558204 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
LRRC49-208ENST00000558204 BAG6P46379 1132 aa12.36□□□□□ -0.43
LRRC49-208ENST00000558204 STK26Q9P289 416 aa12.36□□□□□ -0.43
LRRC49-208ENST00000558204 LRP5O75197 1615 aa12.36□□□□□ -0.43
LRRC49-208ENST00000558204 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
LRRC49-208ENST00000558204 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
LRRC49-208ENST00000558204 SLIT2O94813 1529 aa12.35□□□□□ -0.43
LRRC49-208ENST00000558204 RPGRIP1LQ68CZ1 1315 aa12.35□□□□□ -0.43
LRRC49-208ENST00000558204 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
LRRC49-208ENST00000558204 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
LRRC49-208ENST00000558204 NAIPQ13075 1403 aa12.34□□□□□ -0.43
LRRC49-208ENST00000558204 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
LRRC49-208ENST00000558204 VPS72Q15906 364 aa12.33□□□□□ -0.44
LRRC49-208ENST00000558204 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
LRRC49-208ENST00000558204 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
LRRC49-208ENST00000558204 PRAG1Q86YV5 1406 aa12.33□□□□□ -0.44
LRRC49-208ENST00000558204 HRCP23327 699 aa12.32□□□□□ -0.44
LRRC49-208ENST00000558204 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
LRRC49-208ENST00000558204 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
LRRC49-208ENST00000558204 PSME1Q06323 249 aa12.31□□□□□ -0.44
LRRC49-208ENST00000558204 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
LRRC49-208ENST00000558204 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
LRRC49-208ENST00000558204 PPLO60437 1756 aa12.29□□□□□ -0.44
LRRC49-208ENST00000558204 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
LRRC49-208ENST00000558204 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
LRRC49-208ENST00000558204 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
LRRC49-208ENST00000558204 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
LRRC49-208ENST00000558204 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
LRRC49-208ENST00000558204 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
LRRC49-208ENST00000558204 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
LRRC49-208ENST00000558204 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 ADGRF5Q8IZF2 1346 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
LRRC49-208ENST00000558204 FMN2Q9NZ56 1722 aa12.25□□□□□ -0.45
LRRC49-208ENST00000558204 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
LRRC49-208ENST00000558204 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
LRRC49-208ENST00000558204 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
LRRC49-208ENST00000558204 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
LRRC49-208ENST00000558204 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
LRRC49-208ENST00000558204 TECPR2O15040 1411 aa12.24□□□□□ -0.45
LRRC49-208ENST00000558204 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
LRRC49-208ENST00000558204 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
LRRC49-208ENST00000558204 SBNO1A3KN83 1393 aa12.23□□□□□ -0.45
LRRC49-208ENST00000558204 YY1P25490 414 aa12.23□□□□□ -0.45
LRRC49-208ENST00000558204 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
LRRC49-208ENST00000558204 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
LRRC49-208ENST00000558204 EZH2Q15910 746 aaKnown RBP12.22□□□□□ -0.45
LRRC49-208ENST00000558204 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
LRRC49-208ENST00000558204 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
LRRC49-208ENST00000558204 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.45
LRRC49-208ENST00000558204 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
LRRC49-208ENST00000558204 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.45
LRRC49-208ENST00000558204 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
LRRC49-208ENST00000558204 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
LRRC49-208ENST00000558204 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
LRRC49-208ENST00000558204 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms