RNA–Protein interactions for RNA: ENST00000558162.1

TRIP4-203, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-203ENST00000558162 PRDM9Q9NQV7 894 aa8.33□□□□□ -1.08
TRIP4-203ENST00000558162 GPR37O15354 613 aa8.32□□□□□ -1.08
TRIP4-203ENST00000558162 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
TRIP4-203ENST00000558162 GPIHBP1Q8IV16 184 aa8.32□□□□□ -1.08
TRIP4-203ENST00000558162 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
TRIP4-203ENST00000558162 GMPR2Q9P2T1 348 aaKnown RBP8.32□□□□□ -1.08
TRIP4-203ENST00000558162 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
TRIP4-203ENST00000558162 WFS1O76024 890 aa8.31□□□□□ -1.08
TRIP4-203ENST00000558162 WNT7AO00755 349 aa8.3□□□□□ -1.08
TRIP4-203ENST00000558162 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
TRIP4-203ENST00000558162 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
TRIP4-203ENST00000558162 TRIM32Q13049 653 aa8.29□□□□□ -1.08
TRIP4-203ENST00000558162 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
TRIP4-203ENST00000558162 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
TRIP4-203ENST00000558162 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
TRIP4-203ENST00000558162 MMP16P51512 607 aa8.26□□□□□ -1.09
TRIP4-203ENST00000558162 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
TRIP4-203ENST00000558162 KDM4AO75164 1064 aa8.25□□□□□ -1.09
TRIP4-203ENST00000558162 USP46P62068 366 aa8.25□□□□□ -1.09
TRIP4-203ENST00000558162 INSM1Q01101 510 aaPredicted RBP8.25□□□□□ -1.09
TRIP4-203ENST00000558162 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
TRIP4-203ENST00000558162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRIP4-203ENST00000558162 CCDC24Q8N4L8 307 aa8.25□□□□□ -1.09
TRIP4-203ENST00000558162 PHOX2BQ99453 314 aa8.25□□□□□ -1.09
TRIP4-203ENST00000558162 CD46P15529 392 aa8.24□□□□□ -1.09
TRIP4-203ENST00000558162 SMPD1P17405 629 aa8.24□□□□□ -1.09
TRIP4-203ENST00000558162 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
TRIP4-203ENST00000558162 ATP13A2Q9NQ11 1180 aa8.24□□□□□ -1.09
TRIP4-203ENST00000558162 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
TRIP4-203ENST00000558162 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
TRIP4-203ENST00000558162 DXOO77932 396 aaKnown RBP8.22□□□□□ -1.09
TRIP4-203ENST00000558162 MAP2K5Q13163 448 aa8.22□□□□□ -1.09
TRIP4-203ENST00000558162 WNT7BP56706 349 aa8.21□□□□□ -1.1
TRIP4-203ENST00000558162 J3QL48 77 aa8.2□□□□□ -1.1
TRIP4-203ENST00000558162 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
TRIP4-203ENST00000558162 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
TRIP4-203ENST00000558162 WIPF1O43516 503 aa8.19□□□□□ -1.1
TRIP4-203ENST00000558162 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
TRIP4-203ENST00000558162 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
TRIP4-203ENST00000558162 MDM2Q00987 491 aaPredicted RBP8.18□□□□□ -1.1
TRIP4-203ENST00000558162 MINK1Q8N4C8 1332 aaPredicted RBP8.17□□□□□ -1.1
TRIP4-203ENST00000558162 HOXA2O43364 376 aa8.16□□□□□ -1.1
TRIP4-203ENST00000558162 PRKCSHP14314 528 aaPredicted RBP8.16□□□□□ -1.1
TRIP4-203ENST00000558162 SNRPBP14678 240 aaKnown RBP8.16□□□□□ -1.1
TRIP4-203ENST00000558162 JUNDP17535 347 aa8.16□□□□□ -1.1
TRIP4-203ENST00000558162 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
TRIP4-203ENST00000558162 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
TRIP4-203ENST00000558162 SLC16A10Q8TF71 515 aa8.16□□□□□ -1.1
TRIP4-203ENST00000558162 HPS1Q92902 700 aa8.16□□□□□ -1.1
TRIP4-203ENST00000558162 IRF6O14896 467 aa8.15□□□□□ -1.1
TRIP4-203ENST00000558162 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
TRIP4-203ENST00000558162 NUTM1Q86Y26 1132 aa8.15□□□□□ -1.1
TRIP4-203ENST00000558162 FAM181BA6NEQ2 426 aa8.14□□□□□ -1.11
TRIP4-203ENST00000558162 CLCN1P35523 988 aa8.14□□□□□ -1.11
TRIP4-203ENST00000558162 EHBP1Q8NDI1 1231 aa8.14□□□□□ -1.11
TRIP4-203ENST00000558162 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
TRIP4-203ENST00000558162 SKOR1P84550 965 aa8.13□□□□□ -1.11
TRIP4-203ENST00000558162 RETREG3Q86VR2 466 aa8.13□□□□□ -1.11
TRIP4-203ENST00000558162 HLA-CQ95604 372 aa8.13□□□□□ -1.11
TRIP4-203ENST00000558162 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
TRIP4-203ENST00000558162 GPCPD1Q9NPB8 672 aa8.13□□□□□ -1.11
TRIP4-203ENST00000558162 GUCA2AQ02747 115 aa8.1□□□□□ -1.11
TRIP4-203ENST00000558162 ZC3H15Q8WU90 426 aaKnown RBP8.1□□□□□ -1.11
TRIP4-203ENST00000558162 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
TRIP4-203ENST00000558162 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
TRIP4-203ENST00000558162 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
TRIP4-203ENST00000558162 FDX1P10109 184 aa8.08□□□□□ -1.12
TRIP4-203ENST00000558162 MS4A1P11836 297 aa8.08□□□□□ -1.12
TRIP4-203ENST00000558162 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
TRIP4-203ENST00000558162 FAM217BQ9NTX9 383 aaPredicted RBP8.08□□□□□ -1.12
TRIP4-203ENST00000558162 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
TRIP4-203ENST00000558162 ZMYND10O75800 440 aa8.07□□□□□ -1.12
TRIP4-203ENST00000558162 CCNYL3P0C7X3 344 aa8.07□□□□□ -1.12
TRIP4-203ENST00000558162 NPAS3Q8IXF0 933 aa8.07□□□□□ -1.12
TRIP4-203ENST00000558162 IRF7Q92985 503 aa8.07□□□□□ -1.12
TRIP4-203ENST00000558162 PLEKHG3A1L390 1219 aa8.05□□□□□ -1.12
TRIP4-203ENST00000558162 SIAH2O43255 324 aa8.05□□□□□ -1.12
TRIP4-203ENST00000558162 BMP1P13497 986 aa8.05□□□□□ -1.12
TRIP4-203ENST00000558162 PTPRNQ16849 979 aa8.04□□□□□ -1.12
TRIP4-203ENST00000558162 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
TRIP4-203ENST00000558162 SH3BP2P78314 561 aa8.03□□□□□ -1.12
TRIP4-203ENST00000558162 BARGINQ6ZT62 677 aa8.03□□□□□ -1.12
TRIP4-203ENST00000558162 UNC93B1Q9H1C4 597 aa8.03□□□□□ -1.12
TRIP4-203ENST00000558162 SCARF1Q14162 830 aa8.02□□□□□ -1.13
TRIP4-203ENST00000558162 TRIM46Q7Z4K8 759 aa8.02□□□□□ -1.13
TRIP4-203ENST00000558162 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
TRIP4-203ENST00000558162 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
TRIP4-203ENST00000558162 ZSCAN1Q8NBB4 408 aa8.01□□□□□ -1.13
TRIP4-203ENST00000558162 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
TRIP4-203ENST00000558162 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
TRIP4-203ENST00000558162 GMPRP36959 345 aa8□□□□□ -1.13
TRIP4-203ENST00000558162 KCNH2Q12809 1159 aa8□□□□□ -1.13
TRIP4-203ENST00000558162 EVA1BQ9NVM1 165 aa8□□□□□ -1.13
TRIP4-203ENST00000558162 SSTR3P32745 418 aaPredicted RBP7.99□□□□□ -1.13
TRIP4-203ENST00000558162 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
TRIP4-203ENST00000558162 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
TRIP4-203ENST00000558162 PCDHGC3Q9UN70 934 aa7.99□□□□□ -1.13
TRIP4-203ENST00000558162 TLL2Q9Y6L7 1015 aa7.99□□□□□ -1.13
TRIP4-203ENST00000558162 NNTQ13423 1086 aa7.98□□□□□ -1.13
TRIP4-203ENST00000558162 MTMR2Q13614 643 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms