RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TRPC5Q9UL62 973 aaPredicted RBP8.01□□□□□ -1.13
SPG11-208ENST00000558155 DCCP43146 1447 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 GCC2Q8IWJ2 1684 aa8.01□□□□□ -1.13
SPG11-208ENST00000558155 TRPM2O94759 1503 aa8□□□□□ -1.13
SPG11-208ENST00000558155 USP21Q9UK80 565 aa8□□□□□ -1.13
SPG11-208ENST00000558155 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
SPG11-208ENST00000558155 RGS12O14924 1447 aa7.99□□□□□ -1.13
SPG11-208ENST00000558155 ZNF326Q5BKZ1 582 aaKnown RBP7.99□□□□□ -1.13
SPG11-208ENST00000558155 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
SPG11-208ENST00000558155 DDX17Q92841 729 aaKnown RBP7.99□□□□□ -1.13
SPG11-208ENST00000558155 ADGRL2O95490 1459 aa7.99□□□□□ -1.13
SPG11-208ENST00000558155 PNPLA6Q8IY17 1366 aa7.98□□□□□ -1.13
SPG11-208ENST00000558155 MST1RQ04912 1400 aa7.98□□□□□ -1.13
SPG11-208ENST00000558155 FNBP4Q8N3X1 1017 aaPredicted RBP7.98□□□□□ -1.13
SPG11-208ENST00000558155 NUP155O75694 1391 aa7.97□□□□□ -1.13
SPG11-208ENST00000558155 NHSL1Q5SYE7 1610 aa7.96□□□□□ -1.13
SPG11-208ENST00000558155 SOS2Q07890 1332 aaPredicted RBP7.96□□□□□ -1.14
SPG11-208ENST00000558155 ORAI2Q96SN7 254 aa7.95□□□□□ -1.14
SPG11-208ENST00000558155 E9PCH4 1651 aa7.95□□□□□ -1.14
SPG11-208ENST00000558155 METP08581 1390 aa7.95□□□□□ -1.14
SPG11-208ENST00000558155 PTCH1Q13635 1447 aa7.95□□□□□ -1.14
SPG11-208ENST00000558155 ADGRL3Q9HAR2 1447 aa7.95□□□□□ -1.14
SPG11-208ENST00000558155 UNC13BO14795 1591 aa7.94□□□□□ -1.14
SPG11-208ENST00000558155 C1orf167Q5SNV9 1468 aa7.94□□□□□ -1.14
SPG11-208ENST00000558155 VGFO15240 615 aaPredicted RBP7.93□□□□□ -1.14
SPG11-208ENST00000558155 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
SPG11-208ENST00000558155 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
SPG11-208ENST00000558155 ATRNO75882 1429 aa7.93□□□□□ -1.14
SPG11-208ENST00000558155 SETBP1Q9Y6X0 1596 aa7.93□□□□□ -1.14
SPG11-208ENST00000558155 XRN1Q8IZH2 1706 aaKnown RBP7.92□□□□□ -1.14
SPG11-208ENST00000558155 ESCO1Q5FWF5 840 aa7.92□□□□□ -1.14
SPG11-208ENST00000558155 ROCK1Q13464 1354 aa7.92□□□□□ -1.14
SPG11-208ENST00000558155 NPHP3Q7Z494 1330 aa7.91□□□□□ -1.14
SPG11-208ENST00000558155 IQGAP3Q86VI3 1631 aa7.91□□□□□ -1.14
SPG11-208ENST00000558155 NRXN3Q9Y4C0 1643 aa7.9□□□□□ -1.14
SPG11-208ENST00000558155 LRPPRCP42704 1394 aaKnown RBP7.9□□□□□ -1.14
SPG11-208ENST00000558155 UNC5CLQ8IV45 518 aa7.9□□□□□ -1.14
SPG11-208ENST00000558155 BCL9LQ86UU0 1499 aa7.89□□□□□ -1.15
SPG11-208ENST00000558155 FOXO3O43524 673 aa7.89□□□□□ -1.15
SPG11-208ENST00000558155 ITGAEP38570 1179 aa7.89□□□□□ -1.15
SPG11-208ENST00000558155 LAMC1P11047 1609 aa7.89□□□□□ -1.15
SPG11-208ENST00000558155 BLMP54132 1417 aaPredicted RBP7.88□□□□□ -1.15
SPG11-208ENST00000558155 ROBO2Q9HCK4 1378 aa7.88□□□□□ -1.15
SPG11-208ENST00000558155 RPGRIP1LQ68CZ1 1315 aa7.88□□□□□ -1.15
SPG11-208ENST00000558155 DEFB132Q7Z7B7 95 aa7.88□□□□□ -1.15
SPG11-208ENST00000558155 NALCNQ8IZF0 1738 aa7.88□□□□□ -1.15
SPG11-208ENST00000558155 HFM1A2PYH4 1435 aa7.87□□□□□ -1.15
SPG11-208ENST00000558155 HAP1P54257 671 aaPredicted RBP7.87□□□□□ -1.15
SPG11-208ENST00000558155 XPCQ01831 940 aaPredicted RBP7.87□□□□□ -1.15
SPG11-208ENST00000558155 SEPT12Q8IYM1 358 aa7.87□□□□□ -1.15
SPG11-208ENST00000558155 SPHKAPQ2M3C7 1700 aa7.86□□□□□ -1.15
SPG11-208ENST00000558155 COL22A1Q8NFW1 1626 aaPredicted RBP7.86□□□□□ -1.15
SPG11-208ENST00000558155 CCDC9Q9Y3X0 531 aaKnown RBP7.86□□□□□ -1.15
SPG11-208ENST00000558155 KIF1BO60333 1816 aa7.86□□□□□ -1.15
SPG11-208ENST00000558155 MYOM2P54296 1465 aa7.86□□□□□ -1.15
SPG11-208ENST00000558155 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 NUTM2FA1L443 756 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 SPDYE2BA6NHP3 402 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
SPG11-208ENST00000558155 SPDYE6P0CI01 402 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 BAG6P46379 1132 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 PSME1Q06323 249 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
SPG11-208ENST00000558155 VPS72Q15906 364 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 SPDYE2Q495Y8 402 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 KRT27Q7Z3Y8 459 aa7.85□□□□□ -1.15
SPG11-208ENST00000558155 MARF1Q9Y4F3 1742 aaKnown RBP7.85□□□□□ -1.15
SPG11-208ENST00000558155 SPATA31A3Q5VYP0 1347 aa7.84□□□□□ -1.15
SPG11-208ENST00000558155 RALGAPBQ86X10 1494 aa7.84□□□□□ -1.15
SPG11-208ENST00000558155 PRKAR2AP13861 404 aaKnown RBP7.84□□□□□ -1.15
SPG11-208ENST00000558155 KRT28Q7Z3Y7 464 aa7.84□□□□□ -1.15
SPG11-208ENST00000558155 PXDNQ92626 1479 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 PSDA5PKW4 1024 aaPredicted RBP7.83□□□□□ -1.16
SPG11-208ENST00000558155 ATXN8OSP0DMR3 200 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 HRCP23327 699 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 WAPLQ7Z5K2 1190 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 STK26Q9P289 416 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 SLIT2O94813 1529 aa7.83□□□□□ -1.16
SPG11-208ENST00000558155 A0A0G2JS52 829 aa7.82□□□□□ -1.16
SPG11-208ENST00000558155 MYT1Q01538 1121 aa7.82□□□□□ -1.16
SPG11-208ENST00000558155 PRAG1Q86YV5 1406 aa7.82□□□□□ -1.16
SPG11-208ENST00000558155 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.82□□□□□ -1.16
SPG11-208ENST00000558155 BRWD3Q6RI45 1802 aa7.82□□□□□ -1.16
SPG11-208ENST00000558155 CLTCL1P53675 1640 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 GLI3P10071 1580 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 NAIPQ13075 1403 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 C19orf67A6NJJ6 358 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 LMOD2Q6P5Q4 547 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 LRP5O75197 1615 aa7.81□□□□□ -1.16
SPG11-208ENST00000558155 FAM83GA6ND36 823 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 PLEKHG5O94827 1062 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
SPG11-208ENST00000558155 CABLES1Q8TDN4 633 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 SIRT1Q96EB6 747 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 PHF8Q9UPP1 1060 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 ABCC11Q96J66 1382 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 CDC42BPGQ6DT37 1551 aa7.8□□□□□ -1.16
SPG11-208ENST00000558155 CCDC144AA2RUR9 1427 aa7.79□□□□□ -1.16
SPG11-208ENST00000558155 FAM98CQ17RN3 349 aaKnown RBP7.79□□□□□ -1.16
SPG11-208ENST00000558155 RGL3Q3MIN7 710 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms