RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
CSHL1-207ENST00000558099 NHSL1Q5SYE7 1610 aa19.27■□□□□ 0.68
CSHL1-207ENST00000558099 LRP6O75581 1613 aa19.25■□□□□ 0.67
CSHL1-207ENST00000558099 MIER1Q8N108 512 aa19.25■□□□□ 0.67
CSHL1-207ENST00000558099 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
CSHL1-207ENST00000558099 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
CSHL1-207ENST00000558099 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
CSHL1-207ENST00000558099 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
CSHL1-207ENST00000558099 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
CSHL1-207ENST00000558099 KNDC1Q76NI1 1749 aa19.23■□□□□ 0.67
CSHL1-207ENST00000558099 CDC42BPGQ6DT37 1551 aa19.23■□□□□ 0.67
CSHL1-207ENST00000558099 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
CSHL1-207ENST00000558099 YTHDC2Q9H6S0 1430 aaKnown RBP19.22■□□□□ 0.67
CSHL1-207ENST00000558099 POTEAQ6S8J7 498 aa19.22■□□□□ 0.67
CSHL1-207ENST00000558099 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
CSHL1-207ENST00000558099 CFAP70Q5T0N1 1121 aa19.2■□□□□ 0.66
CSHL1-207ENST00000558099 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
CSHL1-207ENST00000558099 DDX17Q92841 729 aaKnown RBP19.2■□□□□ 0.66
CSHL1-207ENST00000558099 ORAI2Q96SN7 254 aa19.2■□□□□ 0.66
CSHL1-207ENST00000558099 SOS2Q07890 1332 aaPredicted RBP19.19■□□□□ 0.66
CSHL1-207ENST00000558099 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
CSHL1-207ENST00000558099 LRRC59Q96AG4 307 aaKnown RBP19.17■□□□□ 0.66
CSHL1-207ENST00000558099 STK26Q9P289 416 aa19.17■□□□□ 0.66
CSHL1-207ENST00000558099 PNPLA6Q8IY17 1366 aa19.16■□□□□ 0.66
CSHL1-207ENST00000558099 STAC3Q96MF2 364 aa19.15■□□□□ 0.66
CSHL1-207ENST00000558099 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
CSHL1-207ENST00000558099 YTHDC1Q96MU7 727 aaKnown RBP19.15■□□□□ 0.66
CSHL1-207ENST00000558099 PXDNQ92626 1479 aa19.12■□□□□ 0.65
CSHL1-207ENST00000558099 FMN2Q9NZ56 1722 aa19.1■□□□□ 0.65
CSHL1-207ENST00000558099 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
CSHL1-207ENST00000558099 COL22A1Q8NFW1 1626 aaPredicted RBP19.07■□□□□ 0.64
CSHL1-207ENST00000558099 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
CSHL1-207ENST00000558099 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
CSHL1-207ENST00000558099 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
CSHL1-207ENST00000558099 NPHP3Q7Z494 1330 aa19.05■□□□□ 0.64
CSHL1-207ENST00000558099 FOXO3O43524 673 aa19.04■□□□□ 0.64
CSHL1-207ENST00000558099 ZNF772Q68DY9 489 aaPredicted RBP19.04■□□□□ 0.64
CSHL1-207ENST00000558099 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
CSHL1-207ENST00000558099 NUTM2BA6NNL0 878 aaPredicted RBP19.02■□□□□ 0.64
CSHL1-207ENST00000558099 NUTM2EB1AL46 878 aaPredicted RBP19.02■□□□□ 0.64
CSHL1-207ENST00000558099 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
CSHL1-207ENST00000558099 USP32Q8NFA0 1604 aa19.02■□□□□ 0.63
CSHL1-207ENST00000558099 NUTM2FA1L443 756 aa19.02■□□□□ 0.63
CSHL1-207ENST00000558099 MEX3CQ5U5Q3 659 aaKnown RBP19■□□□□ 0.63
CSHL1-207ENST00000558099 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
CSHL1-207ENST00000558099 AFF2P51816 1311 aa19■□□□□ 0.63
CSHL1-207ENST00000558099 ANKARQ7Z5J8 1434 aa19■□□□□ 0.63
CSHL1-207ENST00000558099 KIF1AQ12756 1690 aa19■□□□□ 0.63
CSHL1-207ENST00000558099 SPATA31A3Q5VYP0 1347 aa18.98■□□□□ 0.63
CSHL1-207ENST00000558099 PRR36Q9H6K5 1346 aa18.98■□□□□ 0.63
CSHL1-207ENST00000558099 FNBP4Q8N3X1 1017 aaPredicted RBP18.98■□□□□ 0.63
CSHL1-207ENST00000558099 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
CSHL1-207ENST00000558099 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
CSHL1-207ENST00000558099 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
CSHL1-207ENST00000558099 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
CSHL1-207ENST00000558099 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
CSHL1-207ENST00000558099 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
CSHL1-207ENST00000558099 PHF8Q9UPP1 1060 aa18.97■□□□□ 0.63
CSHL1-207ENST00000558099 POGKQ9P215 609 aa18.96■□□□□ 0.63
CSHL1-207ENST00000558099 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
CSHL1-207ENST00000558099 WASLO00401 505 aaPredicted RBP18.94■□□□□ 0.62
CSHL1-207ENST00000558099 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
CSHL1-207ENST00000558099 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
CSHL1-207ENST00000558099 SBNO1A3KN83 1393 aa18.94■□□□□ 0.62
CSHL1-207ENST00000558099 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
CSHL1-207ENST00000558099 TULP4Q9NRJ4 1543 aa18.93■□□□□ 0.62
CSHL1-207ENST00000558099 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
CSHL1-207ENST00000558099 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
CSHL1-207ENST00000558099 RXRBP28702 533 aa18.92■□□□□ 0.62
CSHL1-207ENST00000558099 BCL9LQ86UU0 1499 aa18.91■□□□□ 0.62
CSHL1-207ENST00000558099 MINK1Q8N4C8 1332 aaPredicted RBP18.91■□□□□ 0.62
CSHL1-207ENST00000558099 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
CSHL1-207ENST00000558099 ANP32EQ9BTT0 268 aa18.91■□□□□ 0.62
CSHL1-207ENST00000558099 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
CSHL1-207ENST00000558099 QTRT2Q9H974 415 aaKnown RBP18.91■□□□□ 0.62
CSHL1-207ENST00000558099 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
CSHL1-207ENST00000558099 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
CSHL1-207ENST00000558099 NGLY1Q96IV0 654 aa18.89■□□□□ 0.62
CSHL1-207ENST00000558099 ATRNO75882 1429 aa18.89■□□□□ 0.61
CSHL1-207ENST00000558099 ATP7BP35670 1465 aa18.89■□□□□ 0.61
CSHL1-207ENST00000558099 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
CSHL1-207ENST00000558099 TRPM3Q9HCF6 1732 aaPredicted RBP18.88■□□□□ 0.61
CSHL1-207ENST00000558099 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
CSHL1-207ENST00000558099 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
CSHL1-207ENST00000558099 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
CSHL1-207ENST00000558099 SLIT2O94813 1529 aa18.87■□□□□ 0.61
CSHL1-207ENST00000558099 RGS12O14924 1447 aa18.87■□□□□ 0.61
CSHL1-207ENST00000558099 PSME1Q06323 249 aa18.86■□□□□ 0.61
CSHL1-207ENST00000558099 USP21Q9UK80 565 aa18.86■□□□□ 0.61
CSHL1-207ENST00000558099 UPF1Q92900 1129 aaKnown RBP eCLIP18.84■□□□□ 0.61
CSHL1-207ENST00000558099 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
CSHL1-207ENST00000558099 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
CSHL1-207ENST00000558099 ALS2Q96Q42 1657 aa18.84■□□□□ 0.61
CSHL1-207ENST00000558099 ARHGEF10O15013 1369 aa18.83■□□□□ 0.61
CSHL1-207ENST00000558099 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
CSHL1-207ENST00000558099 CDK19Q9BWU1 502 aa18.83■□□□□ 0.6
CSHL1-207ENST00000558099 POLR3AO14802 1390 aaPredicted RBP18.82■□□□□ 0.6
CSHL1-207ENST00000558099 CABLES1Q8TDN4 633 aa18.81■□□□□ 0.6
CSHL1-207ENST00000558099 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
CSHL1-207ENST00000558099 ABCA3Q99758 1704 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms