RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 LAMC1P11047 1609 aa18.99■□□□□ 0.63
RDH11-211ENST00000557726 SPATA31E1Q6ZUB1 1445 aa18.99■□□□□ 0.63
RDH11-211ENST00000557726 IFT172Q9UG01 1749 aa18.97■□□□□ 0.63
RDH11-211ENST00000557726 UPF1Q92900 1129 aaKnown RBP eCLIP18.97■□□□□ 0.63
RDH11-211ENST00000557726 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
RDH11-211ENST00000557726 TMEM132EQ6IEE7 984 aa18.96■□□□□ 0.63
RDH11-211ENST00000557726 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
RDH11-211ENST00000557726 CDC42BPGQ6DT37 1551 aa18.96■□□□□ 0.63
RDH11-211ENST00000557726 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
RDH11-211ENST00000557726 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
RDH11-211ENST00000557726 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
RDH11-211ENST00000557726 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
RDH11-211ENST00000557726 NPHP3Q7Z494 1330 aa18.95■□□□□ 0.62
RDH11-211ENST00000557726 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
RDH11-211ENST00000557726 TECPR2O15040 1411 aa18.92■□□□□ 0.62
RDH11-211ENST00000557726 FOXO3O43524 673 aa18.92■□□□□ 0.62
RDH11-211ENST00000557726 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
RDH11-211ENST00000557726 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
RDH11-211ENST00000557726 KNDC1Q76NI1 1749 aa18.91■□□□□ 0.62
RDH11-211ENST00000557726 USP21Q9UK80 565 aa18.91■□□□□ 0.62
RDH11-211ENST00000557726 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
RDH11-211ENST00000557726 YTHDC2Q9H6S0 1430 aaKnown RBP18.9■□□□□ 0.62
RDH11-211ENST00000557726 RGS12O14924 1447 aa18.89■□□□□ 0.61
RDH11-211ENST00000557726 COL22A1Q8NFW1 1626 aaPredicted RBP18.89■□□□□ 0.61
RDH11-211ENST00000557726 TRPC5Q9UL62 973 aaPredicted RBP18.88■□□□□ 0.61
RDH11-211ENST00000557726 PXDNQ92626 1479 aa18.87■□□□□ 0.61
RDH11-211ENST00000557726 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
RDH11-211ENST00000557726 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
RDH11-211ENST00000557726 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
RDH11-211ENST00000557726 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
RDH11-211ENST00000557726 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
RDH11-211ENST00000557726 MYOM2P54296 1465 aa18.84■□□□□ 0.61
RDH11-211ENST00000557726 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
RDH11-211ENST00000557726 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
RDH11-211ENST00000557726 MARF1Q9Y4F3 1742 aaKnown RBP18.83■□□□□ 0.61
RDH11-211ENST00000557726 KIF1AQ12756 1690 aa18.83■□□□□ 0.61
RDH11-211ENST00000557726 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
RDH11-211ENST00000557726 RGPD8O14715 1765 aaPredicted RBP18.82■□□□□ 0.6
RDH11-211ENST00000557726 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
RDH11-211ENST00000557726 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
RDH11-211ENST00000557726 ATRNO75882 1429 aa18.81■□□□□ 0.6
RDH11-211ENST00000557726 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
RDH11-211ENST00000557726 POGKQ9P215 609 aa18.8■□□□□ 0.6
RDH11-211ENST00000557726 PHF8Q9UPP1 1060 aa18.8■□□□□ 0.6
RDH11-211ENST00000557726 ATAD2Q6PL18 1390 aa18.8■□□□□ 0.6
RDH11-211ENST00000557726 SPATA31A3Q5VYP0 1347 aa18.79■□□□□ 0.6
RDH11-211ENST00000557726 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
RDH11-211ENST00000557726 PSME1Q06323 249 aa18.78■□□□□ 0.6
RDH11-211ENST00000557726 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
RDH11-211ENST00000557726 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
RDH11-211ENST00000557726 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.59
RDH11-211ENST00000557726 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
RDH11-211ENST00000557726 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
RDH11-211ENST00000557726 GJD4Q96KN9 370 aaPredicted RBP18.74■□□□□ 0.59
RDH11-211ENST00000557726 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
RDH11-211ENST00000557726 DLC1Q96QB1 1528 aa18.74■□□□□ 0.59
RDH11-211ENST00000557726 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
RDH11-211ENST00000557726 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
RDH11-211ENST00000557726 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
RDH11-211ENST00000557726 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
RDH11-211ENST00000557726 USP32Q8NFA0 1604 aa18.72■□□□□ 0.59
RDH11-211ENST00000557726 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
RDH11-211ENST00000557726 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
RDH11-211ENST00000557726 MINK1Q8N4C8 1332 aaPredicted RBP18.71■□□□□ 0.59
RDH11-211ENST00000557726 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
RDH11-211ENST00000557726 ADGRB1O14514 1584 aa18.7■□□□□ 0.58
RDH11-211ENST00000557726 ANKARQ7Z5J8 1434 aa18.7■□□□□ 0.58
RDH11-211ENST00000557726 SLIT2O94813 1529 aa18.69■□□□□ 0.58
RDH11-211ENST00000557726 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
RDH11-211ENST00000557726 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
RDH11-211ENST00000557726 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
RDH11-211ENST00000557726 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
RDH11-211ENST00000557726 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
RDH11-211ENST00000557726 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
RDH11-211ENST00000557726 HRCP23327 699 aa18.66■□□□□ 0.58
RDH11-211ENST00000557726 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
RDH11-211ENST00000557726 GLI3P10071 1580 aa18.65■□□□□ 0.58
RDH11-211ENST00000557726 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
RDH11-211ENST00000557726 PLCH1Q4KWH8 1693 aa18.65■□□□□ 0.58
RDH11-211ENST00000557726 ABCA3Q99758 1704 aa18.65■□□□□ 0.58
RDH11-211ENST00000557726 WASLO00401 505 aaPredicted RBP18.64■□□□□ 0.57
RDH11-211ENST00000557726 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
RDH11-211ENST00000557726 VPS72Q15906 364 aa18.63■□□□□ 0.57
RDH11-211ENST00000557726 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
RDH11-211ENST00000557726 TULP4Q9NRJ4 1543 aa18.63■□□□□ 0.57
RDH11-211ENST00000557726 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
RDH11-211ENST00000557726 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
RDH11-211ENST00000557726 BRWD3Q6RI45 1802 aa18.62■□□□□ 0.57
RDH11-211ENST00000557726 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
RDH11-211ENST00000557726 FAM83GA6ND36 823 aa18.61■□□□□ 0.57
RDH11-211ENST00000557726 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
RDH11-211ENST00000557726 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
RDH11-211ENST00000557726 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
RDH11-211ENST00000557726 A0A0G2JS52 829 aa18.59■□□□□ 0.57
RDH11-211ENST00000557726 MYT1Q01538 1121 aa18.59■□□□□ 0.57
RDH11-211ENST00000557726 ALS2Q96Q42 1657 aa18.58■□□□□ 0.57
RDH11-211ENST00000557726 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
RDH11-211ENST00000557726 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
RDH11-211ENST00000557726 BTG4Q9NY30 223 aa18.57■□□□□ 0.56
RDH11-211ENST00000557726 NUDT16Q96DE0 195 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms