RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
SPTLC2-206ENST00000557566 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
SPTLC2-206ENST00000557566 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 ATF3P18847 181 aa10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-206ENST00000557566 ADGRB3O60242 1522 aa10.86□□□□□ -0.67
SPTLC2-206ENST00000557566 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
SPTLC2-206ENST00000557566 POTEMA6NI47 508 aa10.86□□□□□ -0.67
SPTLC2-206ENST00000557566 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
SPTLC2-206ENST00000557566 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
SPTLC2-206ENST00000557566 IDI1Q13907 227 aa10.85□□□□□ -0.67
SPTLC2-206ENST00000557566 C19orf44Q9H6X5 657 aa10.85□□□□□ -0.67
SPTLC2-206ENST00000557566 LRP5O75197 1615 aa10.84□□□□□ -0.67
SPTLC2-206ENST00000557566 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
SPTLC2-206ENST00000557566 NUBP1P53384 320 aa10.84□□□□□ -0.67
SPTLC2-206ENST00000557566 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
SPTLC2-206ENST00000557566 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
SPTLC2-206ENST00000557566 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
SPTLC2-206ENST00000557566 BRINP3Q76B58 766 aa10.83□□□□□ -0.68
SPTLC2-206ENST00000557566 ASXL1Q8IXJ9 1541 aa10.83□□□□□ -0.68
SPTLC2-206ENST00000557566 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
SPTLC2-206ENST00000557566 LRRC59Q96AG4 307 aaKnown RBP10.82□□□□□ -0.68
SPTLC2-206ENST00000557566 KANK1Q14678 1352 aa10.81□□□□□ -0.68
SPTLC2-206ENST00000557566 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
SPTLC2-206ENST00000557566 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
SPTLC2-206ENST00000557566 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
SPTLC2-206ENST00000557566 DCCP43146 1447 aa10.8□□□□□ -0.68
SPTLC2-206ENST00000557566 ERBINQ96RT1 1412 aa10.8□□□□□ -0.68
SPTLC2-206ENST00000557566 PNPLA6Q8IY17 1366 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 ZFYVE9O95405 1425 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 GSE1Q14687 1217 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 SLC52A1Q9NWF4 448 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 TRPC5Q9UL62 973 aaPredicted RBP10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 TBX22Q9Y458 520 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
SPTLC2-206ENST00000557566 NOS1P29475 1434 aa10.78□□□□□ -0.68
SPTLC2-206ENST00000557566 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
SPTLC2-206ENST00000557566 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
SPTLC2-206ENST00000557566 USP21Q9UK80 565 aa10.78□□□□□ -0.68
SPTLC2-206ENST00000557566 PIK3R4Q99570 1358 aa10.77□□□□□ -0.68
SPTLC2-206ENST00000557566 KIF15Q9NS87 1388 aa10.77□□□□□ -0.68
SPTLC2-206ENST00000557566 RIMS2Q9UQ26 1411 aa10.77□□□□□ -0.68
SPTLC2-206ENST00000557566 GCC2Q8IWJ2 1684 aa10.77□□□□□ -0.69
SPTLC2-206ENST00000557566 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
SPTLC2-206ENST00000557566 ATRNO75882 1429 aa10.75□□□□□ -0.69
SPTLC2-206ENST00000557566 MST1RQ04912 1400 aa10.75□□□□□ -0.69
SPTLC2-206ENST00000557566 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
SPTLC2-206ENST00000557566 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
SPTLC2-206ENST00000557566 TRPM2O94759 1503 aa10.74□□□□□ -0.69
SPTLC2-206ENST00000557566 CROCC2H7BZ55 1655 aa10.74□□□□□ -0.69
SPTLC2-206ENST00000557566 PTCH1Q13635 1447 aa10.74□□□□□ -0.69
SPTLC2-206ENST00000557566 MYOM3Q5VTT5 1437 aa10.74□□□□□ -0.69
SPTLC2-206ENST00000557566 ADAMTS13Q76LX8 1427 aa10.74□□□□□ -0.69
SPTLC2-206ENST00000557566 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
SPTLC2-206ENST00000557566 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.73□□□□□ -0.69
SPTLC2-206ENST00000557566 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
SPTLC2-206ENST00000557566 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
SPTLC2-206ENST00000557566 AMOTL2Q9Y2J4 779 aa10.72□□□□□ -0.69
SPTLC2-206ENST00000557566 PYGBP11216 843 aa10.71□□□□□ -0.69
SPTLC2-206ENST00000557566 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.69
SPTLC2-206ENST00000557566 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.69
SPTLC2-206ENST00000557566 DDX17Q92841 729 aaKnown RBP10.71□□□□□ -0.69
SPTLC2-206ENST00000557566 LAMC1P11047 1609 aa10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 UNC13BO14795 1591 aa10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 DEFB132Q7Z7B7 95 aa10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 SPHKAPQ2M3C7 1700 aa10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 XRN1Q8IZH2 1706 aaKnown RBP10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
SPTLC2-206ENST00000557566 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
SPTLC2-206ENST00000557566 PTPRUQ92729 1446 aa10.68□□□□□ -0.7
SPTLC2-206ENST00000557566 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
SPTLC2-206ENST00000557566 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
SPTLC2-206ENST00000557566 ADGRL3Q9HAR2 1447 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 RGL2O15211 777 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 HRCP23327 699 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 YY1P25490 414 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 BCL9LQ86UU0 1499 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 NALCNQ8IZF0 1738 aa10.67□□□□□ -0.7
SPTLC2-206ENST00000557566 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
SPTLC2-206ENST00000557566 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
SPTLC2-206ENST00000557566 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
SPTLC2-206ENST00000557566 ABCC5O15440 1437 aa10.66□□□□□ -0.7
SPTLC2-206ENST00000557566 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
SPTLC2-206ENST00000557566 C1orf167Q5SNV9 1468 aa10.64□□□□□ -0.71
SPTLC2-206ENST00000557566 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
SPTLC2-206ENST00000557566 GLI3P10071 1580 aa10.64□□□□□ -0.71
SPTLC2-206ENST00000557566 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
SPTLC2-206ENST00000557566 MYOM2P54296 1465 aa10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 PTPN23Q9H3S7 1636 aa10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 ASTLQ6HA08 431 aaPredicted RBP10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 SLC39A7Q92504 469 aa10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
SPTLC2-206ENST00000557566 DAPK1P53355 1430 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms