RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
NPC2-209ENST00000557510 SETD5Q9C0A6 1442 aa13.62□□□□□ -0.23
NPC2-209ENST00000557510 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
NPC2-209ENST00000557510 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
NPC2-209ENST00000557510 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
NPC2-209ENST00000557510 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
NPC2-209ENST00000557510 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
NPC2-209ENST00000557510 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
NPC2-209ENST00000557510 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
NPC2-209ENST00000557510 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
NPC2-209ENST00000557510 LAMC1P11047 1609 aa13.59□□□□□ -0.23
NPC2-209ENST00000557510 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
NPC2-209ENST00000557510 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
NPC2-209ENST00000557510 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
NPC2-209ENST00000557510 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
NPC2-209ENST00000557510 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
NPC2-209ENST00000557510 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
NPC2-209ENST00000557510 ABCB7O75027 752 aa13.56□□□□□ -0.24
NPC2-209ENST00000557510 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
NPC2-209ENST00000557510 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
NPC2-209ENST00000557510 AFF2P51816 1311 aa13.55□□□□□ -0.24
NPC2-209ENST00000557510 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
NPC2-209ENST00000557510 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
NPC2-209ENST00000557510 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
NPC2-209ENST00000557510 CDC42BPGQ6DT37 1551 aa13.53□□□□□ -0.24
NPC2-209ENST00000557510 C8orf37Q96NL8 207 aa13.52□□□□□ -0.25
NPC2-209ENST00000557510 SOS2Q07890 1332 aaPredicted RBP13.52□□□□□ -0.25
NPC2-209ENST00000557510 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
NPC2-209ENST00000557510 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
NPC2-209ENST00000557510 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
NPC2-209ENST00000557510 STK26Q9P289 416 aa13.51□□□□□ -0.25
NPC2-209ENST00000557510 TECPR2O15040 1411 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 RXRBP28702 533 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
NPC2-209ENST00000557510 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC2-209ENST00000557510 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
NPC2-209ENST00000557510 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
NPC2-209ENST00000557510 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
NPC2-209ENST00000557510 PXDNQ92626 1479 aa13.48□□□□□ -0.25
NPC2-209ENST00000557510 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
NPC2-209ENST00000557510 RGS12O14924 1447 aa13.48□□□□□ -0.25
NPC2-209ENST00000557510 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
NPC2-209ENST00000557510 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
NPC2-209ENST00000557510 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
NPC2-209ENST00000557510 DSG3P32926 999 aa13.48□□□□□ -0.25
NPC2-209ENST00000557510 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
NPC2-209ENST00000557510 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
NPC2-209ENST00000557510 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
NPC2-209ENST00000557510 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
NPC2-209ENST00000557510 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
NPC2-209ENST00000557510 MARF1Q9Y4F3 1742 aaKnown RBP13.46□□□□□ -0.25
NPC2-209ENST00000557510 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.26
NPC2-209ENST00000557510 MYOM2P54296 1465 aa13.45□□□□□ -0.26
NPC2-209ENST00000557510 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
NPC2-209ENST00000557510 FOXO3O43524 673 aa13.45□□□□□ -0.26
NPC2-209ENST00000557510 RBM6P78332 1123 aaKnown RBP13.44□□□□□ -0.26
NPC2-209ENST00000557510 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
NPC2-209ENST00000557510 RAB3GAP2Q9H2M9 1393 aa13.44□□□□□ -0.26
NPC2-209ENST00000557510 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
NPC2-209ENST00000557510 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
NPC2-209ENST00000557510 PROM2Q8N271 834 aa13.42□□□□□ -0.26
NPC2-209ENST00000557510 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
NPC2-209ENST00000557510 USP21Q9UK80 565 aa13.42□□□□□ -0.26
NPC2-209ENST00000557510 KIF1AQ12756 1690 aa13.41□□□□□ -0.26
NPC2-209ENST00000557510 FNBP4Q8N3X1 1017 aaPredicted RBP13.41□□□□□ -0.26
NPC2-209ENST00000557510 ATRNO75882 1429 aa13.4□□□□□ -0.26
NPC2-209ENST00000557510 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
NPC2-209ENST00000557510 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
NPC2-209ENST00000557510 HRCP23327 699 aa13.39□□□□□ -0.27
NPC2-209ENST00000557510 SAFB2Q14151 953 aaKnown RBP eCLIP13.39□□□□□ -0.27
NPC2-209ENST00000557510 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
NPC2-209ENST00000557510 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
NPC2-209ENST00000557510 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
NPC2-209ENST00000557510 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
NPC2-209ENST00000557510 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
NPC2-209ENST00000557510 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
NPC2-209ENST00000557510 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
NPC2-209ENST00000557510 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
NPC2-209ENST00000557510 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
NPC2-209ENST00000557510 AMER1Q5JTC6 1135 aaPredicted RBP13.36□□□□□ -0.27
NPC2-209ENST00000557510 DLC1Q96QB1 1528 aa13.35□□□□□ -0.27
NPC2-209ENST00000557510 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
NPC2-209ENST00000557510 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
NPC2-209ENST00000557510 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
NPC2-209ENST00000557510 GLI3P10071 1580 aa13.34□□□□□ -0.27
NPC2-209ENST00000557510 SLIT2O94813 1529 aa13.34□□□□□ -0.27
NPC2-209ENST00000557510 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
NPC2-209ENST00000557510 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
NPC2-209ENST00000557510 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
NPC2-209ENST00000557510 BRWD3Q6RI45 1802 aa13.33□□□□□ -0.28
NPC2-209ENST00000557510 PLCH1Q4KWH8 1693 aa13.33□□□□□ -0.28
NPC2-209ENST00000557510 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
NPC2-209ENST00000557510 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
NPC2-209ENST00000557510 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
NPC2-209ENST00000557510 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
NPC2-209ENST00000557510 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
NPC2-209ENST00000557510 EP400Q96L91 3159 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms