RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
HNRNPC-232ENST00000557442 FAM135BQ49AJ0 1406 aa15.22■□□□□ 0.03
HNRNPC-232ENST00000557442 PHLPP1O60346 1717 aa15.22■□□□□ 0.03
HNRNPC-232ENST00000557442 ADGRB2O60241 1585 aa15.21■□□□□ 0.03
HNRNPC-232ENST00000557442 ADRA2BP18089 450 aa15.21■□□□□ 0.03
HNRNPC-232ENST00000557442 ATF3P18847 181 aa15.21■□□□□ 0.03
HNRNPC-232ENST00000557442 CCER1Q8TC90 406 aaPredicted RBP15.21■□□□□ 0.03
HNRNPC-232ENST00000557442 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
HNRNPC-232ENST00000557442 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
HNRNPC-232ENST00000557442 NHSL1Q5SYE7 1610 aa15.19■□□□□ 0.02
HNRNPC-232ENST00000557442 MST1RQ04912 1400 aa15.19■□□□□ 0.02
HNRNPC-232ENST00000557442 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
HNRNPC-232ENST00000557442 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
HNRNPC-232ENST00000557442 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
HNRNPC-232ENST00000557442 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
HNRNPC-232ENST00000557442 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
HNRNPC-232ENST00000557442 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
HNRNPC-232ENST00000557442 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
HNRNPC-232ENST00000557442 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
HNRNPC-232ENST00000557442 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
HNRNPC-232ENST00000557442 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
HNRNPC-232ENST00000557442 POGKQ9P215 609 aa15.16■□□□□ 0.02
HNRNPC-232ENST00000557442 KIF1AQ12756 1690 aa15.15■□□□□ 0.02
HNRNPC-232ENST00000557442 AHDC1Q5TGY3 1603 aaPredicted RBP15.15■□□□□ 0.02
HNRNPC-232ENST00000557442 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
HNRNPC-232ENST00000557442 COL16A1Q07092 1604 aaPredicted RBP15.14■□□□□ 0.01
HNRNPC-232ENST00000557442 NBPF8Q3BBV2 869 aa15.14■□□□□ 0.01
HNRNPC-232ENST00000557442 C1orf167Q5SNV9 1468 aa15.13■□□□□ 0.01
HNRNPC-232ENST00000557442 HSPA1LP34931 641 aa15.12■□□□□ 0.01
HNRNPC-232ENST00000557442 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
HNRNPC-232ENST00000557442 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
HNRNPC-232ENST00000557442 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-232ENST00000557442 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
HNRNPC-232ENST00000557442 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
HNRNPC-232ENST00000557442 EIF3AQ14152 1382 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-232ENST00000557442 BRINP3Q76B58 766 aa15.09■□□□□ 0.01
HNRNPC-232ENST00000557442 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-232ENST00000557442 NUTM2FA1L443 756 aa15.08■□□□□ 0
HNRNPC-232ENST00000557442 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
HNRNPC-232ENST00000557442 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
HNRNPC-232ENST00000557442 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
HNRNPC-232ENST00000557442 ANKARQ7Z5J8 1434 aa15.06■□□□□ 0
HNRNPC-232ENST00000557442 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
HNRNPC-232ENST00000557442 ORAI2Q96SN7 254 aa15.04■□□□□ -0
HNRNPC-232ENST00000557442 ATP7BP35670 1465 aa15.04■□□□□ -0
HNRNPC-232ENST00000557442 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
HNRNPC-232ENST00000557442 MED1Q15648 1581 aaPredicted RBP15.03■□□□□ -0
HNRNPC-232ENST00000557442 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
HNRNPC-232ENST00000557442 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-232ENST00000557442 PXDNQ92626 1479 aa15.01□□□□□ -0.01
HNRNPC-232ENST00000557442 AKAP12Q02952 1782 aa15□□□□□ -0.01
HNRNPC-232ENST00000557442 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
HNRNPC-232ENST00000557442 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
HNRNPC-232ENST00000557442 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
HNRNPC-232ENST00000557442 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
HNRNPC-232ENST00000557442 CDK19Q9BWU1 502 aa14.98□□□□□ -0.01
HNRNPC-232ENST00000557442 USP47Q96K76 1375 aa14.98□□□□□ -0.01
HNRNPC-232ENST00000557442 JCADQ9P266 1359 aa14.98□□□□□ -0.01
HNRNPC-232ENST00000557442 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
HNRNPC-232ENST00000557442 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
HNRNPC-232ENST00000557442 FOXO3O43524 673 aa14.97□□□□□ -0.01
HNRNPC-232ENST00000557442 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
HNRNPC-232ENST00000557442 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
HNRNPC-232ENST00000557442 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
HNRNPC-232ENST00000557442 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
HNRNPC-232ENST00000557442 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-232ENST00000557442 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-232ENST00000557442 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
HNRNPC-232ENST00000557442 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
HNRNPC-232ENST00000557442 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
HNRNPC-232ENST00000557442 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
HNRNPC-232ENST00000557442 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
HNRNPC-232ENST00000557442 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
HNRNPC-232ENST00000557442 CRYBG1Q9Y4K1 1723 aa14.93□□□□□ -0.02
HNRNPC-232ENST00000557442 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
HNRNPC-232ENST00000557442 ST20-MTHFSA0A0A6YYL1 179 aa14.92□□□□□ -0.02
HNRNPC-232ENST00000557442 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
HNRNPC-232ENST00000557442 LRP6O75581 1613 aa14.92□□□□□ -0.02
HNRNPC-232ENST00000557442 NRKQ7Z2Y5 1582 aa14.91□□□□□ -0.02
HNRNPC-232ENST00000557442 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
HNRNPC-232ENST00000557442 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
HNRNPC-232ENST00000557442 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 SPATA31A6Q5VVP1 1343 aa14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 MYOM1P52179 1685 aa14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 PHRF1Q9P1Y6 1649 aaKnown RBP14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 PSME1Q06323 249 aa14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 KRT28Q7Z3Y7 464 aa14.9□□□□□ -0.02
HNRNPC-232ENST00000557442 POLR3AO14802 1390 aaPredicted RBP14.89□□□□□ -0.03
HNRNPC-232ENST00000557442 TESK2Q96S53 571 aa14.89□□□□□ -0.03
HNRNPC-232ENST00000557442 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
HNRNPC-232ENST00000557442 ACEP12821 1306 aa14.88□□□□□ -0.03
HNRNPC-232ENST00000557442 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
HNRNPC-232ENST00000557442 DISP3Q9P2K9 1392 aa14.87□□□□□ -0.03
HNRNPC-232ENST00000557442 PIK3C2AO00443 1686 aa14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 PLEKHG3A1L390 1219 aa14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 NUTM2BA6NNL0 878 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 NUTM2EB1AL46 878 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 NUTM2AQ8IVF1 878 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
HNRNPC-232ENST00000557442 PLCH1Q4KWH8 1693 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms