RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
RTN1-208ENST00000557422 KIF1BO60333 1816 aa18.59■□□□□ 0.57
RTN1-208ENST00000557422 EP400Q96L91 3159 aa18.58■□□□□ 0.57
RTN1-208ENST00000557422 HFM1A2PYH4 1435 aa18.57■□□□□ 0.56
RTN1-208ENST00000557422 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
RTN1-208ENST00000557422 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
RTN1-208ENST00000557422 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
RTN1-208ENST00000557422 PXDNQ92626 1479 aa18.55■□□□□ 0.56
RTN1-208ENST00000557422 FOXO3O43524 673 aa18.54■□□□□ 0.56
RTN1-208ENST00000557422 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
RTN1-208ENST00000557422 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
RTN1-208ENST00000557422 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
RTN1-208ENST00000557422 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
RTN1-208ENST00000557422 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
RTN1-208ENST00000557422 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
RTN1-208ENST00000557422 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
RTN1-208ENST00000557422 RALGAPBQ86X10 1494 aa18.48■□□□□ 0.55
RTN1-208ENST00000557422 LRPPRCP42704 1394 aaKnown RBP18.48■□□□□ 0.55
RTN1-208ENST00000557422 NAIPQ13075 1403 aa18.48■□□□□ 0.55
RTN1-208ENST00000557422 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
RTN1-208ENST00000557422 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
RTN1-208ENST00000557422 SLIT2O94813 1529 aa18.47■□□□□ 0.55
RTN1-208ENST00000557422 PPLO60437 1756 aa18.47■□□□□ 0.55
RTN1-208ENST00000557422 GLI3P10071 1580 aa18.47■□□□□ 0.55
RTN1-208ENST00000557422 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
RTN1-208ENST00000557422 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
RTN1-208ENST00000557422 STK26Q9P289 416 aa18.45■□□□□ 0.54
RTN1-208ENST00000557422 SPATA31A3Q5VYP0 1347 aa18.45■□□□□ 0.54
RTN1-208ENST00000557422 BRWD3Q6RI45 1802 aa18.43■□□□□ 0.54
RTN1-208ENST00000557422 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
RTN1-208ENST00000557422 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
RTN1-208ENST00000557422 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
RTN1-208ENST00000557422 TECPR2O15040 1411 aa18.41■□□□□ 0.54
RTN1-208ENST00000557422 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
RTN1-208ENST00000557422 KRT28Q7Z3Y7 464 aa18.41■□□□□ 0.54
RTN1-208ENST00000557422 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
RTN1-208ENST00000557422 PLEKHH1Q9ULM0 1364 aa18.4■□□□□ 0.54
RTN1-208ENST00000557422 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
RTN1-208ENST00000557422 VPS72Q15906 364 aa18.39■□□□□ 0.53
RTN1-208ENST00000557422 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
RTN1-208ENST00000557422 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
RTN1-208ENST00000557422 ONECUT3O60422 494 aaPredicted RBP18.38■□□□□ 0.53
RTN1-208ENST00000557422 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
RTN1-208ENST00000557422 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
RTN1-208ENST00000557422 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
RTN1-208ENST00000557422 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
RTN1-208ENST00000557422 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
RTN1-208ENST00000557422 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
RTN1-208ENST00000557422 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
RTN1-208ENST00000557422 LRP5O75197 1615 aa18.35■□□□□ 0.53
RTN1-208ENST00000557422 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
RTN1-208ENST00000557422 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
RTN1-208ENST00000557422 PSME1Q06323 249 aa18.34■□□□□ 0.53
RTN1-208ENST00000557422 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
RTN1-208ENST00000557422 KNDC1Q76NI1 1749 aa18.34■□□□□ 0.53
RTN1-208ENST00000557422 TNS3Q68CZ2 1445 aa18.33■□□□□ 0.53
RTN1-208ENST00000557422 PLEKHG5O94827 1062 aa18.33■□□□□ 0.52
RTN1-208ENST00000557422 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
RTN1-208ENST00000557422 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
RTN1-208ENST00000557422 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
RTN1-208ENST00000557422 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
RTN1-208ENST00000557422 PSDA5PKW4 1024 aaPredicted RBP18.31■□□□□ 0.52
RTN1-208ENST00000557422 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
RTN1-208ENST00000557422 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
RTN1-208ENST00000557422 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 HRCP23327 699 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 BAG6P46379 1132 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
RTN1-208ENST00000557422 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
RTN1-208ENST00000557422 NRXN1Q9ULB1 1477 aa18.27■□□□□ 0.52
RTN1-208ENST00000557422 ABCA3Q99758 1704 aa18.27■□□□□ 0.52
RTN1-208ENST00000557422 A0A0G2JS52 829 aa18.27■□□□□ 0.52
RTN1-208ENST00000557422 MYT1Q01538 1121 aa18.27■□□□□ 0.52
RTN1-208ENST00000557422 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
RTN1-208ENST00000557422 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
RTN1-208ENST00000557422 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
RTN1-208ENST00000557422 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
RTN1-208ENST00000557422 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
RTN1-208ENST00000557422 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
RTN1-208ENST00000557422 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
RTN1-208ENST00000557422 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
RTN1-208ENST00000557422 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
RTN1-208ENST00000557422 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
RTN1-208ENST00000557422 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
RTN1-208ENST00000557422 FAM182BQ5T319 152 aa18.21■□□□□ 0.51
RTN1-208ENST00000557422 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
RTN1-208ENST00000557422 ANKARQ7Z5J8 1434 aa18.19■□□□□ 0.5
RTN1-208ENST00000557422 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
RTN1-208ENST00000557422 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
RTN1-208ENST00000557422 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
RTN1-208ENST00000557422 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
RTN1-208ENST00000557422 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
RTN1-208ENST00000557422 POGKQ9P215 609 aa18.17■□□□□ 0.5
RTN1-208ENST00000557422 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
RTN1-208ENST00000557422 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
RTN1-208ENST00000557422 EZH2Q15910 746 aaKnown RBP18.15■□□□□ 0.5
RTN1-208ENST00000557422 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms